Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG12_20[genbank_20GCA_5F001936955.1_202017-01-
05] 8,972 sequences; 41,157,244 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq8593 125 4e-24
seq8951 105 4e-18
>seq8593
Length=21612
Score = 125 bits (138), Expect = 4e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||| | ||||||||||| |||||||||||||| ||||| || || ||
Sbjct 10564 GCCACCACGAAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 10505
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| ||||| || || || || || || | || ||||||||||| ||
Sbjct 10504 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 10445
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||||| |||| || || || | ||| ||
Sbjct 10444 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGAC 10385
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| ||||| || || || | ||||| || ||||||||||||
Sbjct 10384 CTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 10336
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||| | ||| | || ||||| |||||| ||||| || ||||| ||
Sbjct 11019 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 10960
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | || || || || || || ||||| || || || |||||||| |||||
Sbjct 10959 AGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGG 10900
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| ||| |||| ||| ||| | ||||||||| || ||
Sbjct 10899 ATACCCTCCTTGTCT-TGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 10841
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| ||||| | ||| || || || || |||||
Sbjct 10840 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10793
Score = 107 bits (118), Expect = 1e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| ||||| |||||||| || ||||| || || |||||||| || |||| || |||||
Sbjct 10311 TGAAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGC 10252
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| |||||||| || | ||||||||||||||| || | ||||||||||| ||||||
Sbjct 10251 TTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 10193
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||||| || ||||| |||||||| ||||| || || || || || ||
Sbjct 10782 AGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGT 10723
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || | || || || || || || | |||||||||||||| || | ||||||
Sbjct 10722 CCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCC 10663
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| ||| |||| || | |||||| | ||| |||||| ||| || |||| ||
Sbjct 10662 TTATCTTGGATC-TTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGT 10604
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || || || || || || |||||||||
Sbjct 10603 GATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 10564
>seq8951
Length=50731
Score = 105 bits (116), Expect = 4e-18
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||| | ||||| ||||||||||| || ||||| || || || || || |
Sbjct 25648 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCTG 25707
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || || |||||||| || || ||||| |||||||| || | ||||||
Sbjct 25708 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 25767
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666
||||| |||| || | || || | || ||||| ||| |||||| || | ||
Sbjct 25768 TTGTCCTGGATC-TTGGACTTGACATTGTCGATGGTGTCGCTCG-ACTCCACCTCAAGGG 25825
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || || || || || | || || || || |||||||||
Sbjct 25826 TGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 25866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314695185498476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |