Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 4e-15
>seq3
Length=5051094
Score = 96.9 bits (106), Expect = 4e-15
Identities = 195/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || ||||||||||| ||| ||| | |||||||| ||||||||||| |||||
Sbjct 937021 ATGTAGGTATCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 936962
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| ||||| || | || || || || || |||||| || | ||
Sbjct 936961 AAGCCGTAGAAGCAACGGGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACCAGG 936902
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| || || || ||||| || || ||||| || |||| || || | ||| ||
Sbjct 936901 TTCTCATTGACAATGCCATCCGAGGCAGCGAAGAAAGCCAGGATGTGAGAGACGAAGTAC 936842
Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
|| || || || || | | | |||||| | | || ||||| | ||| | ||
Sbjct 936841 TTCTCATCATCGTTGAGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCC 936782
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|||| |||||| || |||| | ||||| || ||||| | ||| ||
Sbjct 936781 TCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGAT 936735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544914252080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |