Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 >seq3 Length=5051094 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||||||||| ||| ||| | |||||||| ||||||||||| ||||| Sbjct 937021 ATGTAGGTATCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 936962 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || || || || || |||||| || | || Sbjct 936961 AAGCCGTAGAAGCAACGGGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACCAGG 936902 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || || || || ||||| || || ||||| || |||| || || | ||| || Sbjct 936901 TTCTCATTGACAATGCCATCCGAGGCAGCGAAGAAAGCCAGGATGTGAGAGACGAAGTAC 936842 Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || || || || || | | | |||||| | | || ||||| | ||| | || Sbjct 936841 TTCTCATCATCGTTGAGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCC 936782 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| |||||| || |||| | ||||| || ||||| | ||| || Sbjct 936781 TCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGAT 936735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544914252080