Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3 95.1 1e-14
>seq3
Length=5051094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 288/439 (66%), Gaps = 6/439 (1%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|| ||||| ||| | || || || ||||| || || || || || | | || || ||
Sbjct 937644 TTCTGGTAATCAGCTACCCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTC 937585
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT-CCCAATTCAGAAAT 23962
|||||||| ||| | || |||| || || ||||| ||| | | | |||| || |
Sbjct 937584 TCCATGAAGTCGAAGGGGTTGGAGACCTTGTAGAT-CTTCTCATTGCCCAGAGCAACGAG 937526
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
||| | ||| ||||| ||||| || || ||||||| | | ||||| || | |||
Sbjct 937525 CAAGCGATCCGCGACGAACTCAATGTACTGCTTCATCAGGGTAGAGTTCATGCCGAGAAG 937466
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082
|| | ||| |||| | ||||| || || || | ||| || || || |||||
Sbjct 937465 AGCGCAGGGCAATGCCTCAGTCAAGAATTCCTGCTCGATTGTGACGGCATCGGTGATAAT 937406
Query 24083 AGATCTTACTGT--TTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140
|| | || | ||| || || ||| | | || || | || || |||
Sbjct 937405 CTC-CTGAATGCGCTGCTTG-CTGGGGCGATGCTTCAGGTGAGAGAAGAGCAGGCAGGCG 937348
Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200
|| ||| ||| || |||||||| | | || | |||||||| || || || ||||||
Sbjct 937347 AAGTCGGTGTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 937288
Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260
|| ||||||||||| || ||||| || || || || |||| || || || || ||
Sbjct 937287 ATCAGGCCACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCC 937228
Query 24261 TCTACTGCCGCAAAGGCAA 24279
|| || || || |||||||
Sbjct 937227 TCGACAGCGGCGAAGGCAA 937209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720813318880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |