Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=5051094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 288/439 (66%), Gaps = 6/439 (1%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 || ||||| ||| | || || || ||||| || || || || || | | || || || Sbjct 937644 TTCTGGTAATCAGCTACCCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTC 937585 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT-CCCAATTCAGAAAT 23962 |||||||| ||| | || |||| || || ||||| ||| | | | |||| || | Sbjct 937584 TCCATGAAGTCGAAGGGGTTGGAGACCTTGTAGAT-CTTCTCATTGCCCAGAGCAACGAG 937526 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 ||| | ||| ||||| ||||| || || ||||||| | | ||||| || | ||| Sbjct 937525 CAAGCGATCCGCGACGAACTCAATGTACTGCTTCATCAGGGTAGAGTTCATGCCGAGAAG 937466 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 || | ||| |||| | ||||| || || || | ||| || || || ||||| Sbjct 937465 AGCGCAGGGCAATGCCTCAGTCAAGAATTCCTGCTCGATTGTGACGGCATCGGTGATAAT 937406 Query 24083 AGATCTTACTGT--TTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 || | || | ||| || || ||| | | || || | || || ||| Sbjct 937405 CTC-CTGAATGCGCTGCTTG-CTGGGGCGATGCTTCAGGTGAGAGAAGAGCAGGCAGGCG 937348 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 || ||| ||| || |||||||| | | || | |||||||| || || || |||||| Sbjct 937347 AAGTCGGTGTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 937288 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260 || ||||||||||| || ||||| || || || || |||| || || || || || Sbjct 937287 ATCAGGCCACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCC 937228 Query 24261 TCTACTGCCGCAAAGGCAA 24279 || || || || ||||||| Sbjct 937227 TCGACAGCGGCGAAGGCAA 937209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720813318880