Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 2e-26
>seq2
Length=5234762
Score = 134 bits (148), Expect = 2e-26
Identities = 375/580 (65%), Gaps = 53/580 (9%)
Strand=Plus/Plus
Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748
||| |||||||||||||||||||||||||| |||| ||||||| | | | |||||| |
Sbjct 1830116 CTCGACGTGGTTGAGGTAGACGTGCGCGTCGCCCATGACGTGGGTCAGGCTGCCGGGCAC 1830175
Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808
| | | | || || | ||| | || ||||| | |||||| || |||||||||||
Sbjct 1830176 CAAGTCGCACACATGAGCCAGCATATGCGTGAGCAGCGCGTAGCTTGCGATGTTGAAGGG 1830235
Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA--GGAGA----------- 145855
||| || ||||||||||| | ||||| ||||| || ||||| | |||
Sbjct 1830236 CACGCCAAGCCCCATGTCGCAGGAGCGTTGGTAGAGTTGGCAGTGCAGATGGCCCTTGGG 1830295
Query 145856 --------GCTCCCCG--------CCCGC----------------CACGTAGAACTGGCA 145883
|||| ||| |||| ||||||||||||
Sbjct 1830296 CTTTTCTTGCTCGCCGTTCTCGGCACCGCGCTGCCGTGGGAAAGAAACGTAGAACTGGGC 1830355
Query 145884 CAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAG 145943
| | ||||||||||||||| |||| ||| || || || ||||| || ||||
Sbjct 1830356 AAACATGTGGCAGGGCGGCAGAACCATCAGGGGTAGATCTTTAGGATTCCAAGCACTGAG 1830415
Query 145944 GACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTG--AGCTGG 146001
| || || | | | ||||||| | | || | | | || ||||||
Sbjct 1830416 TATAAGTCTTCGGTCGTAGGGGTTCGTGCGAAGAGTGTGGAT--GATTCGTGCAAGCTGG 1830473
Query 146002 TCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTC 146061
|| |||||| || |||||| ||||| | || ||||| | || ||||| || | |
Sbjct 1830474 TCGTAGCCCTGACCTGTGTAATCGGTCTTCGCATCGACGTATTCCGCGCCGAAATGGCGC 1830533
Query 146062 CACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGG 146121
|| ||||| ||||| ||||| || ||||| || ||| | || |||||||
Sbjct 1830534 CATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTCTCGATGGGTCAGCCCGAGATTA 1830593
Query 146122 GCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCT 146179
| || || || ||||| |||||| ||||||||||||||| ||| ||||| ||| | |
Sbjct 1830594 TCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATCTTGATGCCTGCCTCGTTGAGCGGT 1830653
Query 146180 CATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219
||||| ||| ||| ||||||||| | ||||||
Sbjct 1830654 --ATGGAGGAAGTGTTGCCCTCGATGAACCACAACAGCTC 1830691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076018148240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |