Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-26 >seq2 Length=5234762 Score = 134 bits (148), Expect = 2e-26 Identities = 375/580 (65%), Gaps = 53/580 (9%) Strand=Plus/Plus Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748 ||| |||||||||||||||||||||||||| |||| ||||||| | | | |||||| | Sbjct 1830116 CTCGACGTGGTTGAGGTAGACGTGCGCGTCGCCCATGACGTGGGTCAGGCTGCCGGGCAC 1830175 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 | | | | || || | ||| | || ||||| | |||||| || ||||||||||| Sbjct 1830176 CAAGTCGCACACATGAGCCAGCATATGCGTGAGCAGCGCGTAGCTTGCGATGTTGAAGGG 1830235 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA--GGAGA----------- 145855 ||| || ||||||||||| | ||||| ||||| || ||||| | ||| Sbjct 1830236 CACGCCAAGCCCCATGTCGCAGGAGCGTTGGTAGAGTTGGCAGTGCAGATGGCCCTTGGG 1830295 Query 145856 --------GCTCCCCG--------CCCGC----------------CACGTAGAACTGGCA 145883 |||| ||| |||| |||||||||||| Sbjct 1830296 CTTTTCTTGCTCGCCGTTCTCGGCACCGCGCTGCCGTGGGAAAGAAACGTAGAACTGGGC 1830355 Query 145884 CAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAG 145943 | | ||||||||||||||| |||| ||| || || || ||||| || |||| Sbjct 1830356 AAACATGTGGCAGGGCGGCAGAACCATCAGGGGTAGATCTTTAGGATTCCAAGCACTGAG 1830415 Query 145944 GACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTG--AGCTGG 146001 | || || | | | ||||||| | | || | | | || |||||| Sbjct 1830416 TATAAGTCTTCGGTCGTAGGGGTTCGTGCGAAGAGTGTGGAT--GATTCGTGCAAGCTGG 1830473 Query 146002 TCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTC 146061 || |||||| || |||||| ||||| | || ||||| | || ||||| || | | Sbjct 1830474 TCGTAGCCCTGACCTGTGTAATCGGTCTTCGCATCGACGTATTCCGCGCCGAAATGGCGC 1830533 Query 146062 CACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGG 146121 || ||||| ||||| ||||| || ||||| || ||| | || ||||||| Sbjct 1830534 CATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTCTCGATGGGTCAGCCCGAGATTA 1830593 Query 146122 GCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCT 146179 | || || || ||||| |||||| ||||||||||||||| ||| ||||| ||| | | Sbjct 1830594 TCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATCTTGATGCCTGCCTCGTTGAGCGGT 1830653 Query 146180 CATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 ||||| ||| ||| ||||||||| | |||||| Sbjct 1830654 --ATGGAGGAAGTGTTGCCCTCGATGAACCACAACAGCTC 1830691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076018148240