Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 6e-18
seq3 95.1 1e-14
>seq5
Length=3459663
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| |||| ||||||||||| || ||||| ||||| |
Sbjct 1049171 CCACCACGCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1049112
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| || || || | || || | ||||||||| |||
Sbjct 1049111 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 1049052
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | ||||
Sbjct 1049051 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 1048992
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | ||| |||||||| || || | || ||||| || || ||||| |||
Sbjct 1048991 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 1048941
>seq3
Length=5051094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | ||||| || ||||||| |||||||||||
Sbjct 3316056 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGTTTGCCA 3315997
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| |||| || | ||||||||| || | || |||||||| ||||||| ||
Sbjct 3315996 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTTGACTTG 3315937
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || || | ||| || | || || |||||||| || || ||
Sbjct 3315936 ACATTGTCGATCGTGTCGGAGCTCTCAACCTCGAGAGTGATCGTCTTGCCTGTCAAGGTC 3315877
Query 21159 TTGACAAATATTTGCAT 21175
||||| || || |||||
Sbjct 3315876 TTGACGAAAATCTGCAT 3315860
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || |||| | ||| |||| |||| ||| ||||| |||||||| ||||| |
Sbjct 3316314 CCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTC 3316255
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| |||| || ||||||| || || ||||| ||| | ||||| | ||| ||||| ||
Sbjct 3316254 AAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGG 3316195
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | | | | || || | ||| |
Sbjct 3316194 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACT 3316135
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||||||||| | || ||||| || ||||||||
Sbjct 3316134 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258654493896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |