Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 185 9e-42
seq5 154 2e-32
seq7 105 7e-18
>seq3
Length=5051094
Score = 185 bits (204), Expect = 9e-42
Identities = 317/455 (70%), Gaps = 4/455 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| | || |||||| | | || || | |||| ||||||
Sbjct 937146 AGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCTTTCGCTCAGCGCC 937205
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || |||||||| |||| || ||| |||||| | || || |
Sbjct 937206 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAATCTTCT 937265
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||||||||| || ||||| |||||||| ||||| ||| ||||||||||||||| | |
Sbjct 937266 GGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 937325
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||| || || |||||| ||||| |||| ||| || || ||| || || |
Sbjct 937326 ACGAGGGCCTCCACACCGACTTCGCCTGCCTGCTCTTCTCTCACCTGAAGCATCGCCCCA 937385
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
|| | |||| | |||||| ||||||| || ||| | ||||||||| ||| | |
Sbjct 937386 GCAAGCAGCGCATTCAGGAGATTATCACCGATGCCGTCACAATCGAGCAGGAATTCTTGA 937445
Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339
| || || |||| |||| ||| || || | || | | | | |||| ||| |||||
Sbjct 937446 CTGAGGCATTGCC-CTGCGCTCTTCTCGGCATGAACT-CTACCCTGATGAAGCAGTACAT 937503
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399
||||||||||| || | |||| | | |||| | | ||| |||||| |
Sbjct 937504 TGAGTTCGTCGCGGATCGCTTGCTCGTTGCTCTGGGCAATGAGAAGATCTACAAGGTCTC 937563
Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
|||||| | ||||| ||| | ||||||| |||
Sbjct 937564 CAACCCCTTCGACTTCATGGAGAACATCTCCCTGG 937598
Score = 161 bits (178), Expect = 1e-34
Identities = 207/285 (73%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | || ||
Sbjct 936735 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATCGATCTC 936794
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | || | ||||| | ||| | ||| ||
Sbjct 936795 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGATGATGAGAAGTACTTCGTCTCT 936854
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | ||||| || ||||| ||| || ||||| ||||| ||||| |||||||||||
Sbjct 936855 CACATCCTGGCTTTCTTCGCTGCCTCGGATGGCATTGTCAATGAGAACCTGGTCGAGCGA 936914
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| ||||| ||| | ||||||| || |||||||||||||| |||||| |||
Sbjct 936915 TTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 936974
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | ||||| || | || || |||||||| || |||
Sbjct 936975 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTAC 937019
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| || ||||| |||| || || | ||
Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTCC 3315919
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| ||| || | ||||| ||||| ||||| | ||||||
Sbjct 3315920 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 3315979
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||| ||||||||||| || |||| ||||||||| ||||||||||
Sbjct 3315980 CAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 3316039
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||| || ||||| || | || ||| | || ||
Sbjct 3316040 ATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGG 3316086
Score = 129 bits (142), Expect = 6e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || ||||| ||||| || ||| | || |||||| ||| |
Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | ||| || |||| ||||| ||||| |||||| | |||||
Sbjct 3316376 GATACCATCGATAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCA 3316434
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || |||||||| || | || || | | |||||||||
Sbjct 3316435 GCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACAA 3316494
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||||||| ||| || || || ||
Sbjct 3316495 CATTCAGAAGGAGAGCACCCTCCACCTGGT 3316524
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || ||||| | |
Sbjct 3316088 ATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGTCATCA 3316147
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || |||| | ||| || || | || || ||||||||||| | |||||
Sbjct 3316148 GACACGATTGACAACG-TGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTGACCA 3316206
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || || |||| || ||||| || || || |||| || ||| | | |||||||||
Sbjct 3316207 ACAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGCGACTACAA 3316266
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| |||||||| ||| ||||| | || | |||||| | |||||
Sbjct 3316267 CATTCAGAAGGAAAGCACACTGCACTTGGTTCTCCGCTTGCGTGGCGG 3316314
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| |||||||| |||| ||||| | | || | | | | | |||||
Sbjct 3315656 ACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGATACCATCGACAATGTCAAGTCG 3315715
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| ||||| |||||||| || | |||||||| || | |||| || || ||
Sbjct 3315716 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGATCTTTGCTGGAAAG 3315775
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | |||||||| |||||||||||||||||||||| |||| || ||
Sbjct 3315776 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3315835
Query 40894 CTAGTGTTGCGC 40905
|| ||| | |||
Sbjct 3315836 CTTGTGCTTCGC 3315847
>seq5
Length=3459663
Score = 154 bits (170), Expect = 2e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || |||||||| || ||||||||| | || || || |
Sbjct 1048942 AAGATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCT 1049001
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | ||||| || || | ||||| |||||||||||| | |||
Sbjct 1049002 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 1049061
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| || || ||||| || |||| ||||||||| |||||||
Sbjct 1049062 CAGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 1049121
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| |||| ||||| | ||| ||||| || | || ||
Sbjct 1049122 AACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGG 1049171
>seq7
Length=2782040
Score = 105 bits (116), Expect = 7e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| |||| || || | |||||| | |
Sbjct 1279331 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1279390
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||| ||||| | |||||||| || ||
Sbjct 1279391 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTG 1279450
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || ||||| ||||| || || | || ||||| |||||||||||| ||||||
Sbjct 1279451 ATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAG 1279510
Query 40879 G 40879
|
Sbjct 1279511 G 1279511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218517334560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |