Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 8e-27
>seq6
Length=3061052
Score = 136 bits (150), Expect = 8e-27
Identities = 402/612 (66%), Gaps = 11/612 (2%)
Strand=Plus/Plus
Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892
||||| || |||| ||||| |||||||| |||| ||||||||||| || || |
Sbjct 2275663 TTCAAGACTTTGGAACGCTCGTACCTCCTCAAGCTTGACGGCAAGATCGTCGAGCGTCCT 2275722
Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952
||||||||| | ||||| || |||||||| || || |||| ||| |||| |
Sbjct 2275723 CAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTCATT 2275782
Query 248953 GAGACGTACACCGGAATG-AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011
|||||||| | | ||| | | | | | | || || || | || || ||||||||
Sbjct 2275783 GAGACGTATAACCTCATGTCGAGCAAG-TTCTTCACCCACGCTTCCCCCACACTCTTCAA 2275841
Query 249012 CGCCGGTACCGTCAACAAT--CAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069
|||||||| || || | |||||| ||| ||||| || | | |||| | || |||
Sbjct 2275842 TGCCGGTAC--TCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGATGAC 2275899
Query 249070 TCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGG 249128
| || || || |||||||| || || || | || | ||| || ||| | || ||
Sbjct 2275900 AGCATTGATGGTATCTATGACACCCTCAAGACCTGC-GCCATGATCTCCAAAATGGCTGG 2275958
Query 249129 CGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAA 249188
||| ||||| ||| |||| | |||||| || | ||||| ||||| ||||| ||
Sbjct 2275959 CGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTACCAA 2276018
Query 249189 TGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCAT 249248
|| | ||| | || ||| | ||||| ||| | ||| || || | |
Sbjct 2276019 CGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGATATGT 2276078
Query 249249 CAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGC 249305
|||||| || | || || | || ||||| ||| | || ||||| ||
Sbjct 2276079 TGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTATCTTGAGCCATGGCATGC 2276138
Query 249306 CGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCG 249365
||| |||| |||||||| |||||| |||||| ||||||| ||| | | || ||
Sbjct 2276139 CGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCGTGCTCG 2276198
Query 249366 TGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGG 249425
||| || |||| | ||| ||| || | || |||||||| || ||| || ||||
Sbjct 2276199 TGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAGAACGG 2276258
Query 249426 CGATTGGACGCT 249437
||| ||||| ||
Sbjct 2276259 CGACTGGACCCT 2276270
Score = 95.1 bits (104), Expect = 3e-14
Identities = 121/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| ||||| || | || |||| ||||| ||||| || ||||| || |||||||| ||
Sbjct 2486375 CTGCCTCACCTGTTGTTTTACGGACCTCCGGGAACCGGAAAGACATCTACCATCCTCGCC 2486316
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
|| || || | | | ||| | |||||| | || ||||||||||| ||||||
Sbjct 2486315 CTTGCTCGCCGCATCTACGGCACTGCCAACATGCGCCAGATGGTGCTCGAGCTCAACGCT 2486256
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
|| ||||| ||||| | |||||||| || || |||||||||| ||
Sbjct 2486255 TCCGACGACCGCGGCATCGACGTCGTACGAGAGCAGATCAAGACATT 2486209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764941691008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |