Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 329 3e-85 seq3 114 1e-20 seq7 89.7 5e-13 seq5 84.2 2e-11 >seq6 Length=3061052 Score = 329 bits (364), Expect = 3e-85 Identities = 647/954 (68%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || || || ||||| |||||||||||||| || |||||| | || ||||| || Sbjct 2276564 GAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAG 2276505 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| || || || || | || |||||||||| || || ||||| |||| Sbjct 2276504 AGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCC 2276445 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||||| || | ||||| Sbjct 2276444 TTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGC 2276385 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265 |||| || | | ||| || | | || || ||||||||| | ||||| || Sbjct 2276384 TTCTGGGCCTTGATG-GTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGC 2276326 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 ||||| || | ||||| ||||||||||| || || | | | || ||||| || | Sbjct 2276325 CTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGT 2276266 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || || || || || |||| || ||||| || ||||| || || |||| Sbjct 2276265 CCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAA 2276206 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || || || || || ||||| |||||| |||||| ||| || | || || || Sbjct 2276205 AAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAA 2276146 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 ||||| |||||||| ||||| || || | |||||| ||||| || | ||| ||||| || Sbjct 2276145 TACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACC 2276086 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| || || || | |||||||||||| | || | ||||| || || ||||||||||| Sbjct 2276085 CTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGA 2276026 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | ||||| | || || | | ||| |||| || || Sbjct 2276025 TGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGACGTTGAGGCC 2275966 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || ||| || ||||| ||||| || || ||||| ||||| || || Sbjct 2275965 GATACCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATC 2275906 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 |||||||| || || | |||||| ||| || || |||| || | | || ||| | Sbjct 2275905 AATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACC 2275846 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| ||||| ||| ||||| || ||| | ||||||| || || ||||| Sbjct 2275845 GGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATACGT 2275786 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || ||| || ||||||| ||||| || |||| || || ||||| ||||||| Sbjct 2275785 CTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTG 2275726 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 ||||| | |||||| | ||||| || |||| || || || |||| || || || Sbjct 2275725 CTGAGGACGCTCGACGATCTTGCCGTCAAGCTTGAGGAGGTACGAGCGTTCCAAAGTCTT 2275666 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || || || || | |||||| |||||||| |||| || ||||| || | ||| Sbjct 2275665 GAAGCCGAAGTACTGATAGTTGAAGTCACGGTCGTAGACGATGGCGGAGTCCAA 2275612 Score = 93.3 bits (102), Expect = 4e-14 Identities = 280/424 (66%), Gaps = 15/424 (4%) Strand=Plus/Minus Query 22256 TGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCC 22315 || || || || || || ||||| || ||||| | | | | |||| ||| || ||| Sbjct 2277335 TGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAACTTGACGCTGCGAGATCTCC 2277276 Query 22316 CATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGACGG 22373 || ||||||||||| || | |||| || || || ||| | || |||| | | Sbjct 2277275 CAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGAT--ATTGGGAATGTTCTGAATAG 2277218 Query 22374 ACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCA 22433 | || || | ||||| ||| || || | ||| ||| | ||| ||| || || Sbjct 2277217 AGCCATTCTCAGCAATGATGCGATTCTTCATGGCATCCGACCAGAGACCCATGTCGACCA 2277158 Query 22434 AATCTTTGACCAGATGACGG-TTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGG 22492 ||| |||| || | |||| || || || || ||||| || | |||||| || | ||| Sbjct 2277157 GATCCTTGAGCA-ACCACGGGTTGACGACCTGGAACTCACCAGCCAAGACACGTCTCTGG 2277099 Query 22493 TAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAA 22552 ||||||||||| ||| | ||||| || |||||||||| || || || || | ||| Sbjct 2277098 TAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTG 2277039 Query 22553 GCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTAC 22610 || || ||||| || || | ||| | ||| | | ||||||| |||| | | Sbjct 2277038 GCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCTTGA---CCTGC 2276982 Query 22611 TCTTG-AGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669 || | || | ||| ||||||||||| || ||| |||| || |||||| || | Sbjct 2276981 TCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTCAC---GTTCCACATGTCAAAC 2276925 Query 22670 TGCA 22673 |||| Sbjct 2276924 TGCA 2276921 >seq3 Length=5051094 Score = 114 bits (126), Expect = 1e-20 Identities = 221/326 (68%), Gaps = 0/326 (0%) Strand=Plus/Plus Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT 58022 ||||| || | || | || |||||||| ||||| ||||| || || ||| || Sbjct 937193 TTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTC 937252 Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 || |||| || ||| | ||||| || |||||||||||||| ||||| || ||||||| Sbjct 937253 GCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAG 937312 Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATT 58142 | || || || |||||||| ||||| || || || || ||||| | | ||||||| | Sbjct 937313 CTCATCTCTCGTGACGAGGGCCTCCACACCGACTTCGCCTGCCTGCTCTTCTCTCACCTG 937372 Query 58143 GTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA 58202 || || | | | ||||| ||| ||||||||||| || ||| | ||||| Sbjct 937373 AAGCATCGCCCCAGCAAGCAGCGCATTCAGGAGATTATCACCGATGCCGTCACAATCGAG 937432 Query 58203 AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATG 58262 | || || | || || || | || || | ||||| |||||| | ||||| Sbjct 937433 CAGGAATTCTTGACTGAGGCATTGCCCTGCGCTCTTCTCGGCATGAACTCTACCCTGATG 937492 Query 58263 TCAAAGTACATTGAGTTTGTTGCCGA 58288 ||||||||||||| || || || Sbjct 937493 AAGCAGTACATTGAGTTCGTCGCGGA 937518 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| |||||||||| |||||||| |||| ||||| || Sbjct 3315859 CATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTC 3315918 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| | ||||| || ||| | |||||||| || | || || |||| Sbjct 3315919 CGACACGATCGACAATGTCAAGTCAAAGA-TCCAAGACAAGGAGGGTATCCCTCCTGACC 3315977 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||||| || || ||||||||||||||| | || ||| || | ||| || | Sbjct 3315978 AGCAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACA 3316037 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || || || || || || ||||| || ||| | || | || |||| Sbjct 3316038 ACATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGGTA 3316088 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| || ||||| || ||| | || || ||| | | Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || ||||||||| || | || || |||||| Sbjct 3316376 GATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 3316435 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| |||| || | ||| ||||||| || ||| Sbjct 3316436 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACAAC 3316495 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || ||||| || Sbjct 3316496 ATTCAGAAGGAGAGCACCCTCCACCTGGTCCT 3316527 Score = 82.4 bits (90), Expect = 7e-11 Identities = 221/334 (66%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||||| ||| || | || || Sbjct 936735 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATCGATCTC 936794 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || ||||| | || | Sbjct 936795 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGATGATGAGAAGTACTTCGTCTCT 936854 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | |||| || ||||| || || ||||| ||||| || ||||| ||||||| || Sbjct 936855 CACATCCTGGCTTTCTTCGCTGCCTCGGATGGCATTGTCAATGAGAACCTGGTCGAGCGA 936914 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || || || | | ||||| | ||||| ||||| || || | || Sbjct 936915 TTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 936974 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || ||||||||||| ||| | ||||| | ||| Sbjct 936975 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGCA-GAC 937033 Query 57867 GAGAA--ACGTAGACTGTTCAACGCGATCGAAAC 57898 || || || |||||||| || ||||| || Sbjct 937034 CCAAAGGACCTA-CCTGTTCAATGCCATCGACAC 937066 >seq7 Length=2782040 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| ||||| || |||||| |||| || || | ||||||| | Sbjct 1279330 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 1279389 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || || |||||||||||||| Sbjct 1279390 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCT 1279449 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347 || || |||||||| ||| | || || Sbjct 1279450 GATCTTTGCTGGCAAGCAGCTCGAGGA 1279476 >seq5 Length=3459663 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || || |||||| | || || || | Sbjct 1048942 AAGATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCT 1049001 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | || ||||||||| ||| | || |||||| Sbjct 1049002 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 1049061 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || || ||||| || || ||| | || ||| Sbjct 1049062 CAGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGAC 1049100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765809359520