Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq6 329 3e-85
seq3 114 1e-20
seq7 89.7 5e-13
seq5 84.2 2e-11
>seq6
Length=3061052
Score = 329 bits (364), Expect = 3e-85
Identities = 647/954 (68%), Gaps = 2/954 (0%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|| || || ||||| |||||||||||||| || |||||| | || ||||| ||
Sbjct 2276564 GAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAG 2276505
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| ||| || || || || | || |||||||||| || || ||||| ||||
Sbjct 2276504 AGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCC 2276445
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||||| || | |||||
Sbjct 2276444 TTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGC 2276385
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
|||| || | | ||| || | | || || ||||||||| | ||||| ||
Sbjct 2276384 TTCTGGGCCTTGATG-GTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGC 2276326
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
||||| || | ||||| ||||||||||| || || | | | || ||||| || |
Sbjct 2276325 CTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGT 2276266
Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385
||| || || || || || |||| || ||||| || ||||| || || ||||
Sbjct 2276265 CCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAA 2276206
Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445
|| || || || || || ||||| |||||| |||||| ||| || | || || ||
Sbjct 2276205 AAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAA 2276146
Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505
||||| |||||||| ||||| || || | |||||| ||||| || | ||| ||||| ||
Sbjct 2276145 TACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACC 2276086
Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
||| || || || | |||||||||||| | || | ||||| || || |||||||||||
Sbjct 2276085 CTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGA 2276026
Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625
| ||| || || | ||||| | || || | | ||| |||| || ||
Sbjct 2276025 TGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGACGTTGAGGCC 2275966
Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685
|| || || || ||| || ||||| ||||| || || ||||| ||||| || ||
Sbjct 2275965 GATACCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATC 2275906
Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745
|||||||| || || | |||||| ||| || || |||| || | | || ||| |
Sbjct 2275905 AATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACC 2275846
Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805
||| ||| ||||| ||| ||||| || ||| | ||||||| || || |||||
Sbjct 2275845 GGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATACGT 2275786
Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865
|| ||| || ||||||| ||||| || |||| || || ||||| |||||||
Sbjct 2275785 CTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTG 2275726
Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925
||||| | |||||| | ||||| || |||| || || || |||| || || ||
Sbjct 2275725 CTGAGGACGCTCGACGATCTTGCCGTCAAGCTTGAGGAGGTACGAGCGTTCCAAAGTCTT 2275666
Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|| || || || | |||||| |||||||| |||| || ||||| || | |||
Sbjct 2275665 GAAGCCGAAGTACTGATAGTTGAAGTCACGGTCGTAGACGATGGCGGAGTCCAA 2275612
Score = 93.3 bits (102), Expect = 4e-14
Identities = 280/424 (66%), Gaps = 15/424 (4%)
Strand=Plus/Minus
Query 22256 TGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCC 22315
|| || || || || || ||||| || ||||| | | | | |||| ||| || |||
Sbjct 2277335 TGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAACTTGACGCTGCGAGATCTCC 2277276
Query 22316 CATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGACGG 22373
|| ||||||||||| || | |||| || || || ||| | || |||| | |
Sbjct 2277275 CAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGAT--ATTGGGAATGTTCTGAATAG 2277218
Query 22374 ACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCA 22433
| || || | ||||| ||| || || | ||| ||| | ||| ||| || ||
Sbjct 2277217 AGCCATTCTCAGCAATGATGCGATTCTTCATGGCATCCGACCAGAGACCCATGTCGACCA 2277158
Query 22434 AATCTTTGACCAGATGACGG-TTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGG 22492
||| |||| || | |||| || || || || ||||| || | |||||| || | |||
Sbjct 2277157 GATCCTTGAGCA-ACCACGGGTTGACGACCTGGAACTCACCAGCCAAGACACGTCTCTGG 2277099
Query 22493 TAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAA 22552
||||||||||| ||| | ||||| || |||||||||| || || || || | |||
Sbjct 2277098 TAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTG 2277039
Query 22553 GCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTAC 22610
|| || ||||| || || | ||| | ||| | | ||||||| |||| | |
Sbjct 2277038 GCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCTTGA---CCTGC 2276982
Query 22611 TCTTG-AGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669
|| | || | ||| ||||||||||| || ||| |||| || |||||| || |
Sbjct 2276981 TCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTCAC---GTTCCACATGTCAAAC 2276925
Query 22670 TGCA 22673
||||
Sbjct 2276924 TGCA 2276921
>seq3
Length=5051094
Score = 114 bits (126), Expect = 1e-20
Identities = 221/326 (68%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT 58022
||||| || | || | || |||||||| ||||| ||||| || || ||| ||
Sbjct 937193 TTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTC 937252
Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082
|| |||| || ||| | ||||| || |||||||||||||| ||||| || |||||||
Sbjct 937253 GCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAG 937312
Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATT 58142
| || || || |||||||| ||||| || || || || ||||| | | ||||||| |
Sbjct 937313 CTCATCTCTCGTGACGAGGGCCTCCACACCGACTTCGCCTGCCTGCTCTTCTCTCACCTG 937372
Query 58143 GTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA 58202
|| || | | | ||||| ||| ||||||||||| || ||| | |||||
Sbjct 937373 AAGCATCGCCCCAGCAAGCAGCGCATTCAGGAGATTATCACCGATGCCGTCACAATCGAG 937432
Query 58203 AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATG 58262
| || || | || || || | || || | ||||| |||||| | |||||
Sbjct 937433 CAGGAATTCTTGACTGAGGCATTGCCCTGCGCTCTTCTCGGCATGAACTCTACCCTGATG 937492
Query 58263 TCAAAGTACATTGAGTTTGTTGCCGA 58288
||||||||||||| || || ||
Sbjct 937493 AAGCAGTACATTGAGTTCGTCGCGGA 937518
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| |||||||||| |||||||| |||| ||||| ||
Sbjct 3315859 CATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTC 3315918
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
||||| |||| | ||||| || ||| | |||||||| || | || || ||||
Sbjct 3315919 CGACACGATCGACAATGTCAAGTCAAAGA-TCCAAGACAAGGAGGGTATCCCTCCTGACC 3315977
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||||| || || ||||||||||||||| | || ||| || | ||| || |
Sbjct 3315978 AGCAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACA 3316037
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||| || || || || || || ||||| || ||| | || | || ||||
Sbjct 3316038 ACATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGGTA 3316088
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| || ||||| || ||| | || || ||| | |
Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || ||||||||| || | || || ||||||
Sbjct 3316376 GATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 3316435
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || ||| |||| || | ||| ||||||| || |||
Sbjct 3316436 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACAAC 3316495
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || || ||||| ||
Sbjct 3316496 ATTCAGAAGGAGAGCACCCTCCACCTGGTCCT 3316527
Score = 82.4 bits (90), Expect = 7e-11
Identities = 221/334 (66%), Gaps = 7/334 (2%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||||| ||| || | || ||
Sbjct 936735 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATCGATCTC 936794
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| ||||| || ||| ||| | || |||| || ||||| | || |
Sbjct 936795 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGATGATGAGAAGTACTTCGTCTCT 936854
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||| | |||| || ||||| || || ||||| ||||| || ||||| ||||||| ||
Sbjct 936855 CACATCCTGGCTTTCTTCGCTGCCTCGGATGGCATTGTCAATGAGAACCTGGTCGAGCGA 936914
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || || || | | ||||| | ||||| ||||| || || | ||
Sbjct 936915 TTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 936974
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866
|| ||| | || || || | || || || ||||||||||| ||| | ||||| | |||
Sbjct 936975 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGCA-GAC 937033
Query 57867 GAGAA--ACGTAGACTGTTCAACGCGATCGAAAC 57898
|| || || |||||||| || ||||| ||
Sbjct 937034 CCAAAGGACCTA-CCTGTTCAATGCCATCGACAC 937066
>seq7
Length=2782040
Score = 89.7 bits (98), Expect = 5e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| ||||| ||||| || |||||| |||| || || | ||||||| |
Sbjct 1279330 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 1279389
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | ||||| | || ||||||||| || | || || ||||||||||||||
Sbjct 1279390 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCT 1279449
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347
|| || |||||||| ||| | || ||
Sbjct 1279450 GATCTTTGCTGGCAAGCAGCTCGAGGA 1279476
>seq5
Length=3459663
Score = 84.2 bits (92), Expect = 2e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || || |||||| | || || || |
Sbjct 1048942 AAGATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCT 1049001
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| | || ||||||||| ||| | || ||||||
Sbjct 1049002 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 1049061
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
|||||||| || || ||||| || || ||| | || |||
Sbjct 1049062 CAGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGAC 1049100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765809359520
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