Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6 150 2e-31 >seq6 Length=3061052 Score = 150 bits (166), Expect = 2e-31 Identities = 442/673 (66%), Gaps = 16/673 (2%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || || || |||| || ||||||| | ||| || |||| | || || || ||||| Sbjct 2276294 CCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 2276235 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || ||||| || ||||| || || | || | ||| | | | | |||||| || || Sbjct 2276234 AACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCG 2276175 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| | ||||||||| | | | || |||||| || || | || ||| Sbjct 2276174 TGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATG 2276115 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | ||||| || ||||| || ||||| || | |||||||| ||||| || | Sbjct 2276114 GCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAG 2276055 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | | ||| || | | ||| |||||||| || ||||| |||| || ||| ||| Sbjct 2276054 ACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCA 2275995 Query 66312 CTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | ||||| || | |||| | || || || || |||||||| ||||| | | Sbjct 2275994 GTAGCACGGATGCGGTGGACGTTGA--GGCCGATACCGCCAGCCATTTTGGAGATCATGG 2275937 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 |||| || | || |||||||| || || || || |||||| |||||| | || | Sbjct 2275936 CGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGA 2275877 Query 66430 AACAGCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488 | || |||| ||| ||| || ||| || ||||| || | || || |||||||| Sbjct 2275876 AGCAAGAGGACAGCTGG-GACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGG 2275818 Query 66489 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT----AGCTGAGTCTATATC-CC 66543 || || | || || | || || ||||||||||| ||| | | | | || || Sbjct 2275817 GTGAAGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGCTCAATGT-TGTCTCC 2275759 Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603 |||| || || || |||||||| | |||||||||||| | || ||||||||| Sbjct 2275758 CCAGATG----CCGACAGCAACACGCATGATCATGTGCTGAGGACGCTCGACGATCTTGC 2275703 Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 66663 || | || | | ||| || ||||||||| || || || || || | || | Sbjct 2275702 CGTCAAGCTTGAGGAGGTACGAGCGTTCCAAAGTCTTGAAGCCGAAGTACTGATAGTTGA 2275643 Query 66664 AGTCTCGTTCGTA 66676 |||| || ||||| Sbjct 2275642 AGTCACGGTCGTA 2275630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171927921040