Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 2e-31
>seq6
Length=3061052
Score = 150 bits (166), Expect = 2e-31
Identities = 442/673 (66%), Gaps = 16/673 (2%)
Strand=Plus/Minus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
|| || || |||| || ||||||| | ||| || |||| | || || || |||||
Sbjct 2276294 CCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 2276235
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| ||||| || ||||| || || | || | ||| | | | | |||||| || ||
Sbjct 2276234 AACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCG 2276175
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
||||| | ||||||||| | | | || |||||| || || | || |||
Sbjct 2276174 TGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATG 2276115
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | ||||| || ||||| || ||||| || | |||||||| ||||| || |
Sbjct 2276114 GCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAG 2276055
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | | ||| || | | ||| |||||||| || ||||| |||| || ||| |||
Sbjct 2276054 ACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCA 2275995
Query 66312 CTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369
| ||||| || | |||| | || || || || |||||||| ||||| | |
Sbjct 2275994 GTAGCACGGATGCGGTGGACGTTGA--GGCCGATACCGCCAGCCATTTTGGAGATCATGG 2275937
Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429
|||| || | || |||||||| || || || || |||||| |||||| | || |
Sbjct 2275936 CGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGA 2275877
Query 66430 AACAGCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488
| || |||| ||| ||| || ||| || ||||| || | || || ||||||||
Sbjct 2275876 AGCAAGAGGACAGCTGG-GACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGG 2275818
Query 66489 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT----AGCTGAGTCTATATC-CC 66543
|| || | || || | || || ||||||||||| ||| | | | | || ||
Sbjct 2275817 GTGAAGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGCTCAATGT-TGTCTCC 2275759
Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603
|||| || || || |||||||| | |||||||||||| | || |||||||||
Sbjct 2275758 CCAGATG----CCGACAGCAACACGCATGATCATGTGCTGAGGACGCTCGACGATCTTGC 2275703
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 66663
|| | || | | ||| || ||||||||| || || || || || | || |
Sbjct 2275702 CGTCAAGCTTGAGGAGGTACGAGCGTTCCAAAGTCTTGAAGCCGAAGTACTGATAGTTGA 2275643
Query 66664 AGTCTCGTTCGTA 66676
|||| || |||||
Sbjct 2275642 AGTCACGGTCGTA 2275630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171927921040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |