Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 >seq3 Length=5051094 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || || || | ||| || || | ||| ||| || || |||||||| |||||| Sbjct 3316314 CCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTC 3316255 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||| |||||||| || |||||| |||| ||||| || || || ||||| Sbjct 3316254 AAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGG 3316195 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || || || || || || | | || | |||||| | | || ||| Sbjct 3316194 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACT 3316135 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||||||| | || || ||||| ||||||||| Sbjct 3316134 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCATA 3316087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013728205920