Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq2 84.2 1e-11
>seq2
Length=5234762
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/196 (71%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 25782 GTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTC 25841
||| || || ||||||| | ||| ||||| ||||| || || ||||||||||| | ||
Sbjct 1830512 GTATTCCGCGCCGAAATGGCGCCATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTC 1830571
Query 25842 CCTGTGC-TCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATC 25899
| || ||| |||| ||||||| ||| || | ||| || ||| |||||||||||
Sbjct 1830572 TCGATGGGTCA--GCCCGAGATTATCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATC 1830629
Query 25900 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAG 25958
|| | || |||| |||| | ||||| ||| ||||| || |||||||| |||
Sbjct 1830630 TTGATGCCTGCCTCGTTGAGCGGTATGGAGGAAGTGTTGCCCTC-GATGAACCACAACAG 1830688
Query 25959 CTCCGCCGTGACGGCC 25974
||| || |||| |||
Sbjct 1830689 CTCGGCAATGACAGCC 1830704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137160584738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |