Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 1e-11 >seq2 Length=5234762 Score = 84.2 bits (92), Expect = 1e-11 Identities = 140/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 25782 GTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTC 25841 ||| || || ||||||| | ||| ||||| ||||| || || ||||||||||| | || Sbjct 1830512 GTATTCCGCGCCGAAATGGCGCCATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTC 1830571 Query 25842 CCTGTGC-TCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATC 25899 | || ||| |||| ||||||| ||| || | ||| || ||| ||||||||||| Sbjct 1830572 TCGATGGGTCA--GCCCGAGATTATCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATC 1830629 Query 25900 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAG 25958 || | || |||| |||| | ||||| ||| ||||| || |||||||| ||| Sbjct 1830630 TTGATGCCTGCCTCGTTGAGCGGTATGGAGGAAGTGTTGCCCTC-GATGAACCACAACAG 1830688 Query 25959 CTCCGCCGTGACGGCC 25974 ||| || |||| ||| Sbjct 1830689 CTCGGCAATGACAGCC 1830704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137160584738