Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 6e-22
>seq1
Length=6530789
Score = 116 bits (128), Expect = 6e-22
Identities = 88/101 (87%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||||||||| ||||| ||||| |||||
Sbjct 2707513 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACGAAGCCCGCTAT 2707455
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| ||||||||||| || ||||||||| ||||||
Sbjct 2707454 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 2707414
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 5712198 GCCAAGCGCCACCGAAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCCAT 5712140
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 5712139 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 5712099
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| |||| | |||| ||||||| || || |||| || |
Sbjct 2707356 TGATCTACGAAGAGACCCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGCGACG 2707297
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || | ||||| || || ||| | || ||||||| |
Sbjct 2707296 CGGTCACCTACACCGAGCACGCCAAGAGGAAGACCGTTACTTCCCTTGACGTCGTCTACG 2707237
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| || || ||||||| | || ||||| || |||||
Sbjct 2707236 CCCTGAAGCGCCAGGGCCGTACCCTCTACGGTTTCGGTGGTTAA 2707193
Score = 84.2 bits (92), Expect = 3e-12
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| ||| | |||| |||||| || || |||| ||| |
Sbjct 5712039 TGATCTACGAGGAGACCCGTGGTGTCCTCAAGACATTCCTCGAGGGTGTCATCCGTGACG 5711980
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || ||||||||||| || || ||||| |||||||| | || | |||||||
Sbjct 5711979 CCGTCACATACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTTGTCTATG 5711920
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| || || ||||| | | |||||||| || |||||
Sbjct 5711919 CCCTGAAGCGACAGGGCCGCACCCTGTATGGTTTCGGTGGTTAA 5711876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075103083458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |