Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq6 302 1e-76
>seq6
Length=3061052
Score = 302 bits (334), Expect = 1e-76
Identities = 1060/1637 (65%), Gaps = 36/1637 (2%)
Strand=Plus/Plus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|| || || || || ||||| ||| | |||||||||||| | || ||| | |
Sbjct 2275708 ATCGTCGAGCGTCCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAAC 2275767
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCAC 363560
|||| || ||||| || ||||| || | | || || | ||||| ||||| |
Sbjct 2275768 ATTGAGCGCGTCATTGAGACGTATAACCTCATGTCGAGCAAGT-TCTTCACCCACGCTTC 2275826
Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620
|| ||| | | |||||| || |||| | | | ||| |||| |||||||| || | |
Sbjct 2275827 CCCCACACTCTTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGA 2275886
Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680
|||||||| || ||| || ||||||| |||||| || |||| || || | || ||
Sbjct 2275887 CATGAAGGATGACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTC 2275946
Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT-- 363736
||| | || ||||| || || | | || ||||| | ||||| || | |||
Sbjct 2275947 CAAAATGGCTGGCGGTATCGGCCTCAACG-TCCACCGCATCCGTGCTACTG----GTTCC 2276001
Query 363737 -ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795
||||| ||| || ||| || || || ||||| ||||||||||| || || ||
Sbjct 2276002 TACATTGCCGGTACCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAAC 2276061
Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855
|| || || || || || ||||||||||| ||||| || || ||||| || |||
Sbjct 2276062 AACACGGCTAGATATGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTAT 2276121
Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915
|| ||||| |||||||| | || ||||| || || | || || ||| || ||
Sbjct 2276122 CTTGAGCCATGGCATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAG 2276181
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
|||||| | ||||| |||||||| |||| || || ||| | | || | || ||||||
Sbjct 2276182 GAGGAAGTTCGTGCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAG 2276241
Query 363976 CGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033
|| || ||| | | | | | ||| | || | ||||| | || || ||||||||
Sbjct 2276242 CGTGTCGAG--AAGAACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGG 2276299
Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093
|||| | || || || | || || | || || ||||| || ||||| |
Sbjct 2276300 CCGACTGCTACGGCGAGGAGTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTCGCG 2276359
Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153
|| ||||| || || |||||||| |||| | || | || | |||| |||||
Sbjct 2276360 GCCGCAAGACCATCAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGA 2276419
Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
| || | |||| ||| | ||||| ||| |||||||||||| ||||||| || |||
Sbjct 2276420 CCGGTAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACC 2276479
Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
| || |||| || | || |||||| || |||||||| || || ||| ||| || |||
Sbjct 2276480 TCGGAACAA-TCCGAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGAC 2276538
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGAT 364326
||| ||||| || ||||| || || | || || || | || || || ||
Sbjct 2276539 GAGGTGGCCGTTTGCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGTTGACTACAACGAG 2276598
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384
|| | || |||| | || |||| || || | || | | | ||||||||
Sbjct 2276599 GGCTGCTACGATTTCCAGAAGCTGCATGAGGTCACTCAGGTCGTCGTCC--GCAATCTCA 2276656
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTCTAATATGCGT 364443
|||| | || ||| || | || || | | || | |||| | || ||||||
Sbjct 2276657 ACAAAATCATTGACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGC-AACATGCGT 2276715
Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATG 364503
|| || || ||||| | ||||| || || |||||||| | ||| || || | |
Sbjct 2276716 CACCGACCCATTGGCGTGGGTGTTCAAGGTCTCGCTGATGCTTTCTTGGCCCTGAGACTC 2276775
Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563
| || || || || || ||||||| | || ||| ||||||||||||| || ||
Sbjct 2276776 CCCTTCGAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCAC 2276835
Query 364564 GCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAG 364623
||||| |||| |||||| ||| | || ||| |||| ||| | | ||
Sbjct 2276836 GCCGCCTTGACGGCTTCGGTTGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAG 2276895
Query 364624 GGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTC 364683
|| || ||| ||| |||| | | |||||||| | ||||| || | |||||| |
Sbjct 2276896 GGATCTCCTGCTTCCGAGGGCATCCTGCAGTTTGACATGTGGAACGTGAAGCCATCGGAT 2276955
Query 364684 CGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTC 364743
| ||| | ||||| || ||| | || ||| |||| |||| |||||| | |
Sbjct 2276956 CTGTGGGAGTGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTG 2277015
Query 364744 GTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTC 364803
| ||| ||||||||||| || ||| | || || ||||| ||||| || |||||
Sbjct 2277016 CTGGTAGCTCCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTT 2277075
Query 364804 GAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTT 364863
||||| | || ||| |||| | || || | | || || || | ||| ||
Sbjct 2277076 GAACCTTACACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGTC 2277135
Query 364864 AATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAAC 364923
|| || | |||||||||| |||| || || ||| || |||||||||
Sbjct 2277136 AACCCGTGGTTGCTCAAGGATCTGGTCGACATGGGTCTCTGGTCGGATGCCATGAAGAAT 2277195
Query 364924 TATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAG 364983
||||| || | ||||| ||| | ||||||||||| | || | ||| | |||
Sbjct 2277196 CGCATCATTGCTGAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCTGATATCAAG 2277255
Query 364984 CCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCC 365040
| | ||||| ||||| ||||| || || ||| || ||| | ||||| ||
Sbjct 2277256 AGTCTCTACAAGACCGTCTGGGAGATCTCGCAGCG---TCAAGTTGTGCAGATGGCTGCT 2277312
Query 365041 GATCGCGGTGCTTTTAT 365057
||||| |||||||| ||
Sbjct 2277313 GATCGTGGTGCTTTCAT 2277329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351829882892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |