Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6 302 1e-76 >seq6 Length=3061052 Score = 302 bits (334), Expect = 1e-76 Identities = 1060/1637 (65%), Gaps = 36/1637 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || || || || || ||||| ||| | |||||||||||| | || ||| | | Sbjct 2275708 ATCGTCGAGCGTCCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAAC 2275767 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCAC 363560 |||| || ||||| || ||||| || | | || || | ||||| ||||| | Sbjct 2275768 ATTGAGCGCGTCATTGAGACGTATAACCTCATGTCGAGCAAGT-TCTTCACCCACGCTTC 2275826 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 || ||| | | |||||| || |||| | | | ||| |||| |||||||| || | | Sbjct 2275827 CCCCACACTCTTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGA 2275886 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 |||||||| || ||| || ||||||| |||||| || |||| || || | || || Sbjct 2275887 CATGAAGGATGACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTC 2275946 Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT-- 363736 ||| | || ||||| || || | | || ||||| | ||||| || | ||| Sbjct 2275947 CAAAATGGCTGGCGGTATCGGCCTCAACG-TCCACCGCATCCGTGCTACTG----GTTCC 2276001 Query 363737 -ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 ||||| ||| || ||| || || || ||||| ||||||||||| || || || Sbjct 2276002 TACATTGCCGGTACCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAAC 2276061 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || || || || || || ||||||||||| ||||| || || ||||| || ||| Sbjct 2276062 AACACGGCTAGATATGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTAT 2276121 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 || ||||| |||||||| | || ||||| || || | || || ||| || || Sbjct 2276122 CTTGAGCCATGGCATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAG 2276181 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 |||||| | ||||| |||||||| |||| || || ||| | | || | || |||||| Sbjct 2276182 GAGGAAGTTCGTGCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAG 2276241 Query 363976 CGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 || || ||| | | | | | ||| | || | ||||| | || || |||||||| Sbjct 2276242 CGTGTCGAG--AAGAACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGG 2276299 Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093 |||| | || || || | || || | || || ||||| || ||||| | Sbjct 2276300 CCGACTGCTACGGCGAGGAGTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTCGCG 2276359 Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153 || ||||| || || |||||||| |||| | || | || | |||| ||||| Sbjct 2276360 GCCGCAAGACCATCAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGA 2276419 Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 | || | |||| ||| | ||||| ||| |||||||||||| ||||||| || ||| Sbjct 2276420 CCGGTAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACC 2276479 Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 | || |||| || | || |||||| || |||||||| || || ||| ||| || ||| Sbjct 2276480 TCGGAACAA-TCCGAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGAC 2276538 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGAT 364326 ||| ||||| || ||||| || || | || || || | || || || || Sbjct 2276539 GAGGTGGCCGTTTGCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGTTGACTACAACGAG 2276598 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384 || | || |||| | || |||| || || | || | | | |||||||| Sbjct 2276599 GGCTGCTACGATTTCCAGAAGCTGCATGAGGTCACTCAGGTCGTCGTCC--GCAATCTCA 2276656 Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTCTAATATGCGT 364443 |||| | || ||| || | || || | | || | |||| | || |||||| Sbjct 2276657 ACAAAATCATTGACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGC-AACATGCGT 2276715 Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATG 364503 || || || ||||| | ||||| || || |||||||| | ||| || || | | Sbjct 2276716 CACCGACCCATTGGCGTGGGTGTTCAAGGTCTCGCTGATGCTTTCTTGGCCCTGAGACTC 2276775 Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563 | || || || || || ||||||| | || ||| ||||||||||||| || || Sbjct 2276776 CCCTTCGAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCAC 2276835 Query 364564 GCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAG 364623 ||||| |||| |||||| ||| | || ||| |||| ||| | | || Sbjct 2276836 GCCGCCTTGACGGCTTCGGTTGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAG 2276895 Query 364624 GGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTC 364683 || || ||| ||| |||| | | |||||||| | ||||| || | |||||| | Sbjct 2276896 GGATCTCCTGCTTCCGAGGGCATCCTGCAGTTTGACATGTGGAACGTGAAGCCATCGGAT 2276955 Query 364684 CGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTC 364743 | ||| | ||||| || ||| | || ||| |||| |||| |||||| | | Sbjct 2276956 CTGTGGGAGTGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTG 2277015 Query 364744 GTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTC 364803 | ||| ||||||||||| || ||| | || || ||||| ||||| || ||||| Sbjct 2277016 CTGGTAGCTCCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTT 2277075 Query 364804 GAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTT 364863 ||||| | || ||| |||| | || || | | || || || | ||| || Sbjct 2277076 GAACCTTACACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGTC 2277135 Query 364864 AATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAAC 364923 || || | |||||||||| |||| || || ||| || ||||||||| Sbjct 2277136 AACCCGTGGTTGCTCAAGGATCTGGTCGACATGGGTCTCTGGTCGGATGCCATGAAGAAT 2277195 Query 364924 TATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAG 364983 ||||| || | ||||| ||| | ||||||||||| | || | ||| | ||| Sbjct 2277196 CGCATCATTGCTGAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCTGATATCAAG 2277255 Query 364984 CCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCC 365040 | | ||||| ||||| ||||| || || ||| || ||| | ||||| || Sbjct 2277256 AGTCTCTACAAGACCGTCTGGGAGATCTCGCAGCG---TCAAGTTGTGCAGATGGCTGCT 2277312 Query 365041 GATCGCGGTGCTTTTAT 365057 ||||| |||||||| || Sbjct 2277313 GATCGTGGTGCTTTCAT 2277329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351829882892