Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 205 9e-48 seq5 134 1e-26 seq3 127 2e-24 seq7 104 2e-17 >seq6 Length=3061052 Score = 205 bits (226), Expect = 9e-48 Identities = 928/1449 (64%), Gaps = 53/1449 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| || ||||| ||||| | | || | ||| || ||| | ||| Sbjct 2277137 TTGACGACCTGGAACTCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGT 2277078 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| | || || ||||| || ||||| | ||| | || ||||||||| || ||| Sbjct 2277077 TCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACC 2277018 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTAC-CCCAATCCCA 145236 | || ||||| | ||||||| ||||| | || || || | |||| ||||| Sbjct 2277017 AGCAAGCTGTTGCGGATACCGTGCTCCTTGACCTGCTCACGAAG-GTCCTCCCACTCCCA 2276959 Query 145237 TAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC-GGGGC 145295 || | ||| |||||| ||||||||| |||||| ||||||||| || || | Sbjct 2276958 CAGATCCGATGGCTTCACGTTCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGA 2276899 Query 145296 TGCCTTGAAAGGAACT-GTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC--TCGCCTCCA 145352 | ||||||| | ||| |||| |||| ||||||||||| |||| ||| || Sbjct 2276898 TCCCTTGAATG--ACTCGTAAGGGCCCTGCTCTTTGGCGAGCT--CAACCGAAGCCGTCA 2276843 Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGC-----AGCATCGCTTCATC 145407 ||| || ||||| || || || ||| |||| | | ||| ||| | | Sbjct 2276842 AGGCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGA-- 2276785 Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467 |||| | || | | ||| | |||||||| ||||| || || | |||||||| Sbjct 2276784 ---CTCGAAGGGGAGTCTCAGGGCCAAGAAAGCATCAGCGAGACCTTGAACACCCACGCC 2276728 Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTC 145527 ||||| || || ||||||||| | | ||| || || || || | || ||| Sbjct 2276727 AATGGGTCGGTGACGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTC 2276668 Query 145528 GATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC 145587 || ||||| || | || || || || |||| || | | ||| ||| | || || Sbjct 2276667 AATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATC 2276608 Query 145588 AAACCGAGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTACAAA 145646 | | |||||| | | || || || | | || | || |||| || |||| Sbjct 2276607 GTAGCAGCCCTCGTTGTAGTCAACGAAG-GATGGCAGAGCCAGAGAAGCCAGGTTGCAAA 2276549 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | ||| ||| || | | ||| ||| | | |||||||| ||| | ||| || | || Sbjct 2276548 CGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGA 2276489 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 | ||||| || || | ||| || || || | |||||| ||||||||||||||| | | Sbjct 2276488 TTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGG 2276429 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGC----ACGC 145822 | || ||||| ||| | ||| | ||| | || | ||| || | | Sbjct 2276428 GGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTGATGG 2276369 Query 145823 ACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882 | ||| || ||| ||||| ||||| ||| || | |||||||| | Sbjct 2276368 TCTTGC----GGCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCG 2276313 Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942 |||||||| |||| ||| || || |||| ||||| |||||||| | ||| ||||||| Sbjct 2276312 CCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTC 2276253 Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCT 146002 | ||| |||| ||| |||| |||||| | ||| || || | | | || || || Sbjct 2276252 TTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCA 2276193 Query 146003 TTGCAATCCTCAGCACCCATGTTTCGCTT---CAAATTAAGCACACT-ATAGATGTCCGC 146058 ||||| || ||| ||| ||| | || | ||| | | ||| || Sbjct 2276192 CGAACTTCCTCCTTGCCGTGGTT---CTTACGCAAGTCGAGGA-ACTCGAATACGTCGGC 2276137 Query 146059 GTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCAC 146115 ||||| || |||| ||||| ||| | ||| || || |||||||||||||| || Sbjct 2276136 ATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAAC 2276077 Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175 | | || ||||||| ||||| || | |||||| | | ||| ||| | ||||| Sbjct 2276076 ATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTT 2276017 Query 146176 CGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235 ||| | || || || | || | || || || || | ||||| |||||| Sbjct 2276016 GGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGACGTTGAGGCCGATACCGCC 2275957 Query 146236 -GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTAT 146294 ||| | ||||| || ||||||| ||| || || ||||| || |||||||| | Sbjct 2275956 AGCCAT-TTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGT 2275898 Query 146295 C--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGA 146352 | |||| ||| ||| ||| ||||| ||| ||| ||| | | || || || || Sbjct 2275897 CATCCTTC--ATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACCGGCATT 2275840 Query 146353 GAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTC 146409 ||| | || ||| ||||| || || | || |||| ||| | |||||| || Sbjct 2275839 GAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTT---GCTCGACATGAGGTTATACGTCTC 2275783 Query 146410 GATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTG 146469 || || | ||||| ||| || ||||| | ||| || ||||||| |||||| || Sbjct 2275782 AATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTGCTG 2275723 Query 146470 GGGCCGCTC 146478 || ||||| Sbjct 2275722 AGGACGCTC 2275714 >seq5 Length=3459663 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| || || | ||| |||||||| || |||||||| ||| Sbjct 1049171 CCACCACGCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1049112 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||||| || ||| Sbjct 1049111 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 1049052 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||| | Sbjct 1049051 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 1048992 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| || || || || |||||||||||||| Sbjct 1048991 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 1048945 >seq3 Length=5051094 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||||||| || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 3316086 CCACCGCGCAAACGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3316027 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||| ||||| ||| | || | ||||||||||| |||||| Sbjct 3316026 AGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 3315967 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| | ||| | Sbjct 3315966 ATACCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGAGCTCTCAACC 3315907 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || || || | || || ||||||||||||||| Sbjct 3315906 TCGAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAAATCTGCATG 3315859 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | ||| |||||| ||||||||||| ||||| Sbjct 3316543 GCCGCCACGGAGACGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCT 3316484 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| |||||||| || ||| |||| | |||||||||||| || || Sbjct 3316483 CAAAGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGG 3316424 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||| | | || | |||||| |||| |||| Sbjct 3316423 GATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGAC 3316364 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||||| || || || || ||||| || ||||| Sbjct 3316363 CTCCAAGGTAATAGTTTTACCCGTCAGGGTCTTGACGAAGATTTGCAT 3316316 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | ||| |||||||| || |||||||| ||| Sbjct 3315859 GCCACCTCGGAGGCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3315800 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || |||||||| || || |||| |||||||||||||| ||||| Sbjct 3315799 CAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGG 3315740 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || ||| ||||| | || | ||||| | | ||||| Sbjct 3315739 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAGCTCTCGAC 3315680 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| || | ||| || ||||| Sbjct 3315679 CTCGAGAGTGATGGTCTTGCCGGT 3315656 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || ||||| || || || || || | || ||||| ||||||||||| |||||| Sbjct 3316314 CCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTC 3316255 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| || |||||||| || |||| | |||||| ||||| |||||| Sbjct 3316254 AAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGG 3316195 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | || || | ||||||| Sbjct 3316194 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACT 3316135 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || ||||| || ||||| Sbjct 3316134 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088 Score = 93.3 bits (102), Expect = 4e-14 Identities = 333/510 (65%), Gaps = 23/510 (5%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAAC-AGCAGCACCGCGAC 46145 || ||| | |||||||| |||| ||||| || |||||| | | || || | | Sbjct 937133 CCTTGCATTCGCAAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGACTCCT-C 937191 Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205 |||||| |||| |||| ||||| || ||| ||||| ||||||| ||| || Sbjct 937192 TTTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATT 937251 Query 46206 TGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 ||| | ||||| | |||| | ||| | |||||||| ||||| || |||||| Sbjct 937252 CGCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGA 937311 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCG 46325 ||| || || || ||||||||||| || || ||||| || || || || | ||| Sbjct 937312 GCTCATCTCTCGTGACGAGGGCCTCCACACCGACTTCGCCTGCCTGCTCT---TCTCTCA 937368 Query 46326 CGTGCACGACAAGCTTGCGCCCGA-----CACCG--TGCTGAGCATGTTCAAGGAGGCGG 46378 | || |||| | ||||| | || || | | | || ||| || || | Sbjct 937369 CCTG------AAGCAT-CGCCCCAGCAAGCAGCGCATTCAGGAGATTATCACCGATGCCG 937421 Query 46379 TGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG 46438 | | || ||| |||| || || || | ||| ||||| || || || ||||||||| Sbjct 937422 TCACAATCGAGCAGGAATTCTTGACTGAGGCATTGCCCTGCGCTCTTCTCGGCATGAACT 937481 Query 46439 C-ACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 | || | ||| | ||||| ||||| || ||||| || ||||||| || | Sbjct 937482 CTACCCT-GATGAAGCAGTACATTGAGTTCGTCGCGGATCGCTTGCTCGTTGCTCTGGGC 937540 Query 46498 CAGCCGAAGCATTTTCACGCGC-GCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556 | |||| || | || | | ||| || || || || ||| | ||||||||||||| Sbjct 937541 AATGAGAAG-ATCTACAAGGTCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGG 937599 Query 46557 GGGCAAAACTAATTTTTTCGAAAAGCGCGT 46586 ||||| || || || ||||| ||||| || Sbjct 937600 TGGCAAGACCAACTTCTTCGAGAAGCGGGT 937629 >seq7 Length=2782040 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||| || ||| || ||||| ||||||||||| || ||| Sbjct 1279511 CCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1279452 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| |||||||| || || ||||| ||| || ||||| | | Sbjct 1279451 TCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1279392 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||| | |||| ||| | ||| || || || || || || |||| Sbjct 1279391 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1279332 Query 131225 AA 131226 || Sbjct 1279331 AA 1279330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012174583040