Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=5051094 Score = 114 bits (126), Expect = 1e-20 Identities = 198/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| |||||||| | ||| || || | || || |||| |||||||| || ||| Sbjct 937021 ATGTAGGTATCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 936962 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | || || | |||||| || || |||| ||| || || Sbjct 936961 AAGCCGTAGAAGCAACGGGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACCAGG 936902 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || ||||| || || || || ||||||| || || | || | Sbjct 936901 TTCTCATTGACAATGCCATCCGAGGCAGCGAAGAAAGCCAGGATGTGAGAGACGAAGTAC 936842 Query 93542 TTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||||||||||| || | | || | ||| ||| || || || || ||||||| || Sbjct 936841 TTCTCATCATCGTTGAGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCC 936782 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| | ||||| || || || || || || |||||||| | ||| || Sbjct 936781 TCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGAT 936735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860062159440