Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3 129 5e-25 >seq3 Length=5051094 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||||||| ||||||| ||| || || || ||||||||| || Sbjct 3316506 TCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCCTCCAGCTGCTTACCAGCGAAG 3316447 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||| ||||| || || || || || ||||| |||||| || | | Sbjct 3316446 ATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTA 3316387 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||| ||| |||||||||| |||| ||| | ||||| || ||||| || || || Sbjct 3316386 TCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTTTTACCCGTCAGGGTCTTGACG 3316327 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 3316326 AAGATTTGCAT 3316316 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| | | | ||| || || | || ||| || ||||||||||| ||| Sbjct 3316317 ATACCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCG 3316258 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || || || ||||| || ||||| |||| |||||||||||||| ||| Sbjct 3316257 CTCAAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGA 3316198 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || ||||| || | | |||| ||||| | || ||| Sbjct 3316197 GGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCG 3316138 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| |||||||| || || || || || || ||||| Sbjct 3316137 ACTTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133857238872