Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 6e-11
>seq3
Length=5051094
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || ||||| || || ||||||||||||||||||||||| || ||| ||
Sbjct 3316533 AGACGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAGTACGA 3316474
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || |||| ||||| || || || ||||| |||||||| || || | | |||
Sbjct 3316473 CCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCC 3316414
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089
|||||| ||| || ||| | | | | |||| | |||||| || | ||
Sbjct 3316413 TTGTCCTGAATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACCTCCAAGGTA 3316354
Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||||| || || || || || || |||||||||||
Sbjct 3316353 ATAGTTTTACCCGTCAGGGTCTTGACGAAGATTTGCAT 3316316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397061887045012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |