Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq6 246 4e-60 seq3 96.9 4e-15 >seq6 Length=3061052 Score = 246 bits (272), Expect = 4e-60 Identities = 1071/1685 (64%), Gaps = 33/1685 (2%) Strand=Plus/Minus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | |||| ||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct 2277482 TCAACGGTGAATTGAATGGGTGCCGCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 2277423 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 ||||| || |||||||| || | ||||| || | ||| | || ||| Sbjct 2277422 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTACCCATGGTAGGATCC 2277363 Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737 | |||| | ||| | ||| ||||| || ||||| |||||||| || ||||| Sbjct 2277362 TTCATGTGAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATC 2277303 Query 113738 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 113797 | | || | | | ||| ||||| || || ||||||| |||| |||||| | Sbjct 2277302 TGCACAACTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCA 2277243 Query 113798 GGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCC 113857 ||||||| || || || || |||||| | | | ||| ||| |||||| | Sbjct 2277242 GGGATATTGGGAATGTTCTGAATAGAGCCATTCTCAGCAATGATGCGATTCTTCATGGCA 2277183 Query 113858 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 113917 | ||||||||||| || | ||||||| | | | ||||| || ||| Sbjct 2277182 TCCGACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAAC 2277123 Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977 ||||| || | | |||||| | || || |||| ||||| || |||||||| |||||| Sbjct 2277122 TCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTG 2277063 Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037 || || | ||||| | ||| ||||||||||||||| || | || | |||||| ||| Sbjct 2277062 TTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGG 2277003 Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 114097 | ||| | ||| | | | || ||| | ||||| || | | || || | Sbjct 2277002 ATACCGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTC 2276943 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 | | |||||| |||||||| ||||| || | ||| || || ||||||| |||| |||| Sbjct 2276942 ACGTTCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCG 2276883 Query 114158 TATGGGCCCTCAACCTCCGCCA----ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213 || ||||||| | | || | | || ||| || | | ||| ||||| || || Sbjct 2276882 TAAGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGC-CGTC---AAGGCGGCGTGGTAAAT 2276827 Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC---G 114270 || ||||| || | |||| | |||||| || || || | ||||| | Sbjct 2276826 GGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAG 2276767 Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 | ||| || |||| ||||||||||| ||||| | |||||| || || || | ||| Sbjct 2276766 GGCCAA---GAAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCAT 2276710 Query 114331 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 || ||||| || || ||||| || || || || | | || ||||| Sbjct 2276709 GTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATT 2276650 Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450 | ||| |||| |||| ||||| ||||| | | |||| | | || ||| | Sbjct 2276649 GCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGC---CCTCGTT 2276593 Query 114451 ATTGACATACTTAGGA----AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 114506 | | || || |||| || || | || ||||| || || || | ||| || Sbjct 2276592 GTAGTCA-ACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAG 2276534 Query 114507 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 114566 | |||||| || || || || || | || ||||| || || || | ||||| Sbjct 2276533 GGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCT 2276474 Query 114567 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 114626 | || || ||| ||| || ||||||||| |||||| | || | || ||||| | Sbjct 2276473 TCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAG 2276414 Query 114627 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC 114685 | |||| || |||||||| | ||| | | || | | || | | || | | | || Sbjct 2276413 TCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTG-ATGGTCTTGCGGCCGCGA 2276355 Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 ||||| ||||||||| || | ||| |||||||| || || | || | || Sbjct 2276354 CCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGA 2276295 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||||| || || ||||| | || | ||| | || || ||| |||||||||||| Sbjct 2276294 CCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 2276235 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || |||||||||||||| || |||| ||||| ||| ||| |||| || | || Sbjct 2276234 AACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCG 2276175 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || |||||| || | || || | | || || ||||| || || || || | Sbjct 2276174 TGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATG 2276115 Query 114926 GCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 || | | || | |||| ||| |||||| ||||| || || ||| || Sbjct 2276114 GCAAAGGCGCC---AGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTG 2276058 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGAC 115039 || || |||||||| || | | ||| | ||| || || || || ||| || Sbjct 2276057 AAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAA 2275998 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | | || | || |||| || | || ||||| || ||| || ||||| Sbjct 2275997 CCAGTAGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATG 2275938 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 ||||| | |||| || | ||||| || || || |||| |||| | ||| ||| Sbjct 2275937 GCGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGG 2275878 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||||| |||| || | | || ||||| || |||||||| || || | |||||| Sbjct 2275877 AAGCAAGAGGACAGCTGGGACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGG 2275818 Query 115220 ATGAA 115224 |||| Sbjct 2275817 GTGAA 2275813 >seq3 Length=5051094 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||| ||||||||||| |||||||| || || |||||| ||| || ||||| || || Sbjct 937339 GTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCC 937280 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | |||| || ||| ||||| ||||| ||| Sbjct 937279 ACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGC 937220 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 ||||| |||| || |||| ||| || ||| Sbjct 937219 GGCGAAGGCAACCAGGCGCTGAGCGAAAGAG 937189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352808506480