Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq6 302 4e-77
>seq6
Length=3061052
Score = 302 bits (334), Expect = 4e-77
Identities = 1078/1664 (65%), Gaps = 42/1664 (3%)
Strand=Plus/Plus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||| | |||||| ||| |||| ||||||||||||||| | || |||| | | |
Sbjct 2275654 TACTTCGGCTTCAAGACTTTGGAACGCTCGTACCTCCTCAAGCTTGACGGCAAGATCGTC 2275713
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
||||| || || || || | ||||| || || |||| || || || |||| |
Sbjct 2275714 GAGCGTCCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAG 2275773
Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903
|| | | | | | |||| | |||| | ||| || |||| ||
Sbjct 2275774 CGCGTCATTGAGACGTATAACCTCATGTCGAGCAAGTTCTTCACCCACGCTTCCCCCACA 2275833
Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962
|| ||||| || || || || | | ||| |||| || || |||||| | ||| | ||
Sbjct 2275834 CTCTTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGAC-ATGAA 2275892
Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022
|| ||| ||| || || | |||| ||||||| ||| || | ||||| |||
Sbjct 2275893 GGATGACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAAT 2275952
Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082
|| || || ||||| ||| |||||| | | ||||| | ||||||||||| |||
Sbjct 2275953 GGCTGGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGG 2276012
Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142
|||||| || || |||||||| || ||||| ||||| ||||||||||||||| |||| |
Sbjct 2276013 TACCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAG 2276072
Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202
|| || ||||||||||| | | | || | || || ||||||| ||||| ||
Sbjct 2276073 ATATGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTATCTTGAGCCATG 2276132
Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAG 94262
||| || ||||| | ||| ||||| |||| |||||||||||||| || | |
Sbjct 2276133 GCATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCG 2276192
Query 94263 GGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAA 94322
|| | || || |||| || |||||| | ||||| || || ||||| || ||||||||
Sbjct 2276193 TGCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAA 2276252
Query 94323 AAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382
||| || ||||| || | || |||||||| || || || ||| ||||| | ||
Sbjct 2276253 GAACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGG 2276312
Query 94383 ATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTTA 94441
| ||||| | |||||||| ||||| | || || | |||| | ||| |
Sbjct 2276313 CGAGGAGTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTCGCGGCC-GCAAGACCA 2276371
Query 94442 TGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCT 94501
| | || |||||||||| | || | || | ||| ||||| |||| ||||
Sbjct 2276372 TCAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCCT 2276431
Query 94502 ACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATC 94560
||| | | |||||| | ||| |||| |||| ||||||| || ||||||| |||
Sbjct 2276432 TCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAACCTCGGAACAATC 2276490
Query 94561 AAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTG 94620
|| || || || ||||||||||| ||||||| | || |||||| | || ||
Sbjct 2276491 CGAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTT 2276550
Query 94621 TGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCT 94680
|| ||||||| || | ||| | | ||||| || ||||| | | |||
Sbjct 2276551 TGCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGT------TGACTACA--ACGAGGGCT 2276602
Query 94681 TCGTTCGATCTGGAGGAGCT-TGTGAACT-TCGCGGGAAGGATGGTCTTGAACCTGAACA 94738
| | |||| | || |||| ||| | | | || | | ||| || || ||||
Sbjct 2276603 GC-TACGATTTCCAGAAGCTGCATGAGGTCACTCAGGTCG--TCGTCCGCAATCTCAACA 2276659
Query 94739 GGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATC 94798
| || ||| ||| ||||||||||| |||||| ||| ||| || || |
Sbjct 2276660 AAATCATTGACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACC 2276719
Query 94799 GGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCT 94858
| ||||| ||| | || || || ||| |||| || || | || || | || ||||
Sbjct 2276720 GACCCATTGGCGTGGGTGTTCAAGGTCTCGCTGATGCTTTCTTGGCCCTGAGACTCCCCT 2276779
Query 94859 ACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGG 94918
||| || ||| || | ||||| | | || || |||| |||||| ||| |
Sbjct 2276780 TCGAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCG 2276839
Query 94919 CCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCG 94978
|| ||| || || | | |||| | | | ||| || |||| || ||| |
Sbjct 2276840 CCTTGACGGCTTCGGTTGAGCTCGCCAAAGAGCAGGGC---CCTTACGAGTCATTCAAGG 2276896
Query 94979 GATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGG 95036
|||| || ||| ||||||| | ||||| ||| | ||| |||||||| ||||
Sbjct 2276897 GATCTCCTGCTT--CCGAGGGCATCCTGCAGTTTGACATGTGGAACGTGAAGCCATCGGA 2276954
Query 95037 TCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCT 95096
||||| || ||||| | || || | | || | | |||||| | ||| |
Sbjct 2276955 TCTGTGGGAGTGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTT 2277014
Query 95097 GCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTT 95156
||| || || ||||||||||| ||| || |||| || || |||||||| || | ||
Sbjct 2277015 GCTGGTAGCTCCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTT 2277074
Query 95157 CGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCAT 95216
||||| | ||| |||||| | ||| | || || || | || || || |||| ||| |
Sbjct 2277075 TGAACCTTACACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGT 2277134
Query 95217 CAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGT---GTGGGGTGACAAGGTCA 95272
|||| | | || ||| || | || | ||||| | || || || || | |
Sbjct 2277135 CAACCCGTGGTTGCTCAAGGATCTGGTCGAC-ATGGGTCTCTGGTCGGATGCCA---TGA 2277190
Query 95273 AGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAG 95328
|||| | | |||| | || ||||| | |||||||| || | || || |
Sbjct 2277191 AGAATCGCATCATTGCT----GAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCT 2277246
Query 95329 GACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| |||||| |||||||||||||| ||||||||| |||||||
Sbjct 2277247 GATATCAAGAGTCTCTACAAGACCGTCTGGGAGATCTCGCAGCG 2277290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722544491760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |