Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq6 302 4e-77 >seq6 Length=3061052 Score = 302 bits (334), Expect = 4e-77 Identities = 1078/1664 (65%), Gaps = 42/1664 (3%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||| | |||||| ||| |||| ||||||||||||||| | || |||| | | | Sbjct 2275654 TACTTCGGCTTCAAGACTTTGGAACGCTCGTACCTCCTCAAGCTTGACGGCAAGATCGTC 2275713 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 ||||| || || || || | ||||| || || |||| || || || |||| | Sbjct 2275714 GAGCGTCCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAG 2275773 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | |||| | |||| | ||| || |||| || Sbjct 2275774 CGCGTCATTGAGACGTATAACCTCATGTCGAGCAAGTTCTTCACCCACGCTTCCCCCACA 2275833 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962 || ||||| || || || || | | ||| |||| || || |||||| | ||| | || Sbjct 2275834 CTCTTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGAC-ATGAA 2275892 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || ||| ||| || || | |||| ||||||| ||| || | ||||| ||| Sbjct 2275893 GGATGACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAAT 2275952 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 || || || ||||| ||| |||||| | | ||||| | ||||||||||| ||| Sbjct 2275953 GGCTGGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGG 2276012 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 |||||| || || |||||||| || ||||| ||||| ||||||||||||||| |||| | Sbjct 2276013 TACCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAG 2276072 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 || || ||||||||||| | | | || | || || ||||||| ||||| || Sbjct 2276073 ATATGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTATCTTGAGCCATG 2276132 Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAG 94262 ||| || ||||| | ||| ||||| |||| |||||||||||||| || | | Sbjct 2276133 GCATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCG 2276192 Query 94263 GGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAA 94322 || | || || |||| || |||||| | ||||| || || ||||| || |||||||| Sbjct 2276193 TGCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAA 2276252 Query 94323 AAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382 ||| || ||||| || | || |||||||| || || || ||| ||||| | || Sbjct 2276253 GAACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGG 2276312 Query 94383 ATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTTA 94441 | ||||| | |||||||| ||||| | || || | |||| | ||| | Sbjct 2276313 CGAGGAGTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTCGCGGCC-GCAAGACCA 2276371 Query 94442 TGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCT 94501 | | || |||||||||| | || | || | ||| ||||| |||| |||| Sbjct 2276372 TCAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCCT 2276431 Query 94502 ACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATC 94560 ||| | | |||||| | ||| |||| |||| ||||||| || ||||||| ||| Sbjct 2276432 TCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAACCTCGGAACAATC 2276490 Query 94561 AAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTG 94620 || || || || ||||||||||| ||||||| | || |||||| | || || Sbjct 2276491 CGAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTT 2276550 Query 94621 TGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCT 94680 || ||||||| || | ||| | | ||||| || ||||| | | ||| Sbjct 2276551 TGCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGT------TGACTACA--ACGAGGGCT 2276602 Query 94681 TCGTTCGATCTGGAGGAGCT-TGTGAACT-TCGCGGGAAGGATGGTCTTGAACCTGAACA 94738 | | |||| | || |||| ||| | | | || | | ||| || || |||| Sbjct 2276603 GC-TACGATTTCCAGAAGCTGCATGAGGTCACTCAGGTCG--TCGTCCGCAATCTCAACA 2276659 Query 94739 GGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATC 94798 | || ||| ||| ||||||||||| |||||| ||| ||| || || | Sbjct 2276660 AAATCATTGACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACC 2276719 Query 94799 GGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCT 94858 | ||||| ||| | || || || ||| |||| || || | || || | || |||| Sbjct 2276720 GACCCATTGGCGTGGGTGTTCAAGGTCTCGCTGATGCTTTCTTGGCCCTGAGACTCCCCT 2276779 Query 94859 ACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGG 94918 ||| || ||| || | ||||| | | || || |||| |||||| ||| | Sbjct 2276780 TCGAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCG 2276839 Query 94919 CCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCG 94978 || ||| || || | | |||| | | | ||| || |||| || ||| | Sbjct 2276840 CCTTGACGGCTTCGGTTGAGCTCGCCAAAGAGCAGGGC---CCTTACGAGTCATTCAAGG 2276896 Query 94979 GATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGG 95036 |||| || ||| ||||||| | ||||| ||| | ||| |||||||| |||| Sbjct 2276897 GATCTCCTGCTT--CCGAGGGCATCCTGCAGTTTGACATGTGGAACGTGAAGCCATCGGA 2276954 Query 95037 TCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCT 95096 ||||| || ||||| | || || | | || | | |||||| | ||| | Sbjct 2276955 TCTGTGGGAGTGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTT 2277014 Query 95097 GCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTT 95156 ||| || || ||||||||||| ||| || |||| || || |||||||| || | || Sbjct 2277015 GCTGGTAGCTCCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTT 2277074 Query 95157 CGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCAT 95216 ||||| | ||| |||||| | ||| | || || || | || || || |||| ||| | Sbjct 2277075 TGAACCTTACACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGT 2277134 Query 95217 CAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGT---GTGGGGTGACAAGGTCA 95272 |||| | | || ||| || | || | ||||| | || || || || | | Sbjct 2277135 CAACCCGTGGTTGCTCAAGGATCTGGTCGAC-ATGGGTCTCTGGTCGGATGCCA---TGA 2277190 Query 95273 AGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAG 95328 |||| | | |||| | || ||||| | |||||||| || | || || | Sbjct 2277191 AGAATCGCATCATTGCT----GAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCT 2277246 Query 95329 GACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || |||||| |||||||||||||| ||||||||| ||||||| Sbjct 2277247 GATATCAAGAGTCTCTACAAGACCGTCTGGGAGATCTCGCAGCG 2277290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722544491760