Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 185 9e-42 seq3 109 5e-19 seq7 102 8e-17 seq5 102 8e-17 >seq6 Length=3061052 Score = 185 bits (204), Expect = 9e-42 Identities = 752/1163 (65%), Gaps = 39/1163 (3%) Strand=Plus/Minus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 || || | || ||| || ||||||| || || ||||| || ||||| || |||||| Sbjct 2277158 AGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCACCAGCCAAGACACGTCTCTGG 2277099 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||| |||| ||||||||||| |||| || ||||| || ||||| | || | Sbjct 2277098 TAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTG 2277039 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCC 153188 || || |||||| || |||| ||| || || | |||||| | || | | | Sbjct 2277038 GCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCT---TGACCTGC 2276982 Query 153189 TTC--AACG-CCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT 153245 | || | ||| ||| |||||||| |||| || || ||||||||||||| |||| Sbjct 2276981 TCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTCACGTTCCACATGTCAAACTGC 2276922 Query 153246 AACACTCC-TCGACTGGCGGGACTGCCGGCAAACGTACT-GTAGCTGCCGTCGCGTTGGG 153303 | | || ||| | | ||| || || | ||| ||| ||| | || || Sbjct 2276921 AGGATGCCCTCGGAAG-CAGGAGATCCCTTGAATG-ACTCGTAAGGGCCCTGCTCTTTGG 2276864 Query 153304 CCAGTTCGCAGCTAGCC-TCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362 | || || |||| || || ||| | | ||| |||||||| ||| || || || Sbjct 2276863 CGAGCTCAACCGAAGCCGTCAAG-GCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTTC 2276805 Query 153363 AGAACGGCCGCTTCTTCGCT--CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCA 153420 | || || || | | |||| | || | | ||| || || || || || | Sbjct 2276804 A--ACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAAGAAAGCATCAGCGA 2276747 Query 153421 GACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT- 153479 |||| || | ||| ||||| |||||||| || | ||||||| | || ||| || Sbjct 2276746 GACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTGTTTCGGGC-CTC-CTG 2276689 Query 153480 -ATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTAT 153538 | ||| ||||| ||| || || ||||||||||| ||||| || || || | ||| | Sbjct 2276688 GACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGAC 2276629 Query 153539 CGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATT-CACGG 153597 | | | || |||| |||||| ||| |||| | | ||| | ||| || | Sbjct 2276628 CTCATGCAGCTTCTGGAAATCGTAGCAGCCCTCGTTGTAGTCAACGAAG-GATGGCAGAG 2276570 Query 153598 CAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGG 153657 | | ||| ||||| || || |||||| ||| || | | ||| ||||| | |||||||| Sbjct 2276569 CCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGG 2276510 Query 153658 CGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACG 153717 |||||||||| | | || || | || | ||| ||||| ||||| ||||| Sbjct 2276509 TGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 2276450 Query 153718 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTAT 153777 || ||| |||||||| | || |||||||| || | |||| ||| | Sbjct 2276449 GATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACC 2276390 Query 153778 GCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACA 153837 ||| | ||| || | || || ||| |||||||||||||| ||| |||| Sbjct 2276389 ACAGCTTCTGGGCCTTGATGGTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCATACA 2276330 Query 153838 GTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCA 153897 ||||||||| ||||||||||||||||| || || || |||| || || ||||||| Sbjct 2276329 AGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGGGCACATCA 2276270 Query 153898 GCGACCACATATCGTCGGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGA 153951 | | ||| |||| |||| ||| || |||||||||||| || | ||||| Sbjct 2276269 GGGTCCA------GTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGA 2276216 Query 153952 GCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA 154011 | || | | || || || || |||||| ||| ||| || | || Sbjct 2276215 GGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGA 2276156 Query 154012 -GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC 154070 | || | | | | |||||| ||||| || |||| |||| ||| | ||| || |||| Sbjct 2276155 GGAACTCGA-ATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGC 2276097 Query 154071 ---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCC 154127 || || ||||| || || | | || | ||||||||||| || | |||||| || Sbjct 2276096 TTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACC 2276037 Query 154128 AGGCCGCTTGCGGTGCCGTTGGT 154150 || ||| | | || |||||||| Sbjct 2276036 AGACCGTTGGATGTTCCGTTGGT 2276014 >seq3 Length=5051094 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||||||| | ||| | ||| | | | |||||||| || |||||||||||| Sbjct 3316086 CCACCGCGCAAACGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3316027 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || ||||| || | | || || ||||| ||||| ||||| Sbjct 3316026 AGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 3315967 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| ||| || | ||||| | | ||||||| ||| || Sbjct 3315966 ATACCCTCCTTGTCTTGGATCTTTGACTTGACATTGT-CGATCGTGTCGGAGCTCTCAAC 3315908 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | ||| || || |||| || || || |||||||||||| Sbjct 3315907 CTCGAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAAATCTGCATG 3315859 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACT-CCTTTTGAATGTTGTAGTCGCT 138446 ||||| ||||| || | ||| || || | || || | |||| ||||||||||||||||| Sbjct 3316314 CCGCCACGCAAGCGGAGAACCAAGTGCA-GTGTGCTTTCCTTCTGAATGTTGTAGTCGCT 3316256 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||||||||| || || | | |||| |||||||||||||| ||||| Sbjct 3316255 CAAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGG 3316196 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| || || | | || | ||||| | ||||| || Sbjct 3316195 GATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCGAC 3316136 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | ||| || || || || || || || || || ||||| Sbjct 3316135 TTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| |||||| ||||| || || ||||| | | Sbjct 3316507 CTCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCCTCCAGCTGCTTACCAGCGAA 3316448 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATT 138541 ||| |||||||| ||||| || || ||||| || ||||| ||| | || | || | | Sbjct 3316447 GATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC-CTGAATCTTGCTCTTCACGT 3316389 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | ||| ||| | || || ||||| | || | |||||||| ||||| || || | Sbjct 3316388 TATCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTTTTACCCGTCAGGGTCTTGA 3316329 Query 138602 CAAAAATCTGCAT 138614 | || || ||||| Sbjct 3316328 CGAAGATTTGCAT 3316316 >seq7 Length=2782040 Score = 102 bits (112), Expect = 8e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||| || || || |||||||| || || || | | ||| Sbjct 1279511 CCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1279452 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | |||||||| ||||| ||||| ||||| || ||||| ||| || || | ||||| Sbjct 1279451 TCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1279392 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 | | |||||||| ||||||||||||| || | || || || ||||| || || || Sbjct 1279391 -CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1279333 Query 138604 AAA 138606 ||| Sbjct 1279332 AAA 1279330 >seq5 Length=3459663 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || || || | | | |||||||| || |||||||||||| Sbjct 1049171 CCACCACGCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1049112 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| || ||||| ||||| || || Sbjct 1049111 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 1049052 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | ||||| | | |||||| | |||||||| Sbjct 1049051 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT-CGATGGTGTCCGAAGACTCCAC 1048993 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || || || || ||||||||||| Sbjct 1048992 CTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 1048945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261742452320