Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6 242 5e-59 seq3 102 1e-16 >seq6 Length=3061052 Score = 242 bits (268), Expect = 5e-59 Identities = 1081/1695 (64%), Gaps = 53/1695 (3%) Strand=Plus/Minus Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578 |||| | |||| ||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct 2277482 TCAACGGTGAATTGAATGGGTGCCGCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 2277423 Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638 ||||| || |||||||| || | ||||| || | ||| | || ||| Sbjct 2277422 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTACCCATGGTAGGATCC 2277363 Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698 | |||| | ||| | ||| ||||| || ||||| || ||||| || ||||| Sbjct 2277362 TTCATGTGAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATC 2277303 Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758 | | || | | | ||| ||||| || || ||||||| |||| |||||| | Sbjct 2277302 TGCACAACTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCA 2277243 Query 115759 GGGATATCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATA 115815 ||||||| || || || ||||||||| | || ||| || ||| |||||| Sbjct 2277242 GGGATATTGGGAATGTTCTGAATAGAGCCATTCTCAGCAATGA---TGCGATTCTTCATG 2277186 Query 115816 TCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAAC 115871 | | ||||||||||| || | ||||||| | || | | | ||||| || Sbjct 2277185 GCATCCGACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGG----TTGACGAC 2277130 Query 115872 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCA 115931 |||||||| || | | |||||| | || ||||||| ||||| || |||||||| Sbjct 2277129 CTGGAACTCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCA 2277070 Query 115932 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 115991 |||||||| || | ||||| | || ||||||||||||||| || | || | ||| Sbjct 2277069 TTCATTGTTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCT 2277010 Query 115992 GTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 116051 |||||||| ||| | || | | | || ||| | ||||| || | | Sbjct 2277009 GTTGCGGATACCGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGA 2276950 Query 116052 TGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111 || || | | | |||||| |||||||| ||||| || | ||| || || ||||||| || Sbjct 2276949 TGGCTTCACGTTCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAA 2276890 Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCA----ATTCGGAGCTCGCCTCGAGGGCTGCGT 116167 || ||| || ||||||| | | || | | || ||| || | | ||| |||| Sbjct 2276889 TGACTCGTAAGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGC-CGTC---AAGGCGGCGT 2276834 Query 116168 GATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGA 116227 | || || || ||||| || | |||| | |||||| || || || | || Sbjct 2276833 GGTAAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGA 2276774 Query 116228 GAC---GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 116284 | | || ||| || |||| ||||||||||| ||||| | |||||| || || | Sbjct 2276773 GTCTCAGGGCCAA---GAAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGT 2276717 Query 116285 GTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTAT 116344 | | ||| || ||||| || || ||||| || || || || | | | Sbjct 2276716 GACGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGT 2276657 Query 116345 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 116404 | ||||| | ||| |||| |||| ||||| ||||| | | |||| | | || Sbjct 2276656 TGAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGC--- 2276600 Query 116405 TCTCTTCATTGACATACTTAGGA----AGGGCGATTGACGCCAGATTACACACAGAGGTC 116460 ||| | | | || || |||| || || | || ||||| || || || | | Sbjct 2276599 CCTCGTTGTAGTCA-ACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACC 2276541 Query 116461 TCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCC 116520 || || | |||||| || || || || || | || ||||| || || || Sbjct 2276540 TCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCG 2276481 Query 116521 AAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCC 116580 | |||||| || || ||| ||| || ||||||||||||||| | || | || Sbjct 2276480 AGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCG 2276421 Query 116581 GTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT 116639 ||||| || |||| || |||||||| | ||| | | || | | || | | || | Sbjct 2276420 GTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTG-ATGGTCTTGCG 2276362 Query 116640 GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CT 116698 | | || ||||| ||||||||| || | |||||||||||| || || ||| | Sbjct 2276361 GCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTC-GCCGTAGCAGT 2276303 Query 116699 CTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCC 116758 | | || ||||| || || || || | || | ||| | || || ||| || | Sbjct 2276302 CGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACAC 2276243 Query 116759 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTT 116818 |||||||||| || |||||||||||||| ||| |||| ||||| ||| ||| |||| | Sbjct 2276242 GCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCT 2276183 Query 116819 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCA 116878 | | || || || |||||| || | || || | | || || ||||| || || | Sbjct 2276182 CCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAA 2276123 Query 116879 GGTACACCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCG 116932 | || | || | | || |||| ||| |||||| ||||| || |||| Sbjct 2276122 GATAGATGGCAAAGGCGCCAGGACGCTTG---TTGCCACCCTGGTCAACATATCTAGCCG 2276066 Query 116933 TTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA 116992 | ||| || || |||||||| || | | ||| | ||| || || || || || Sbjct 2276065 TGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAA 2276006 Query 116993 --TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTT 117050 || || || | | || | || ||||| || | || ||||| || ||| || Sbjct 2276005 TGTAGGA-ACCAG-TAGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTT 2275948 Query 117051 TGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATT 117110 ||||| ||||| | |||| || | ||||| ||||| || |||| |||| | Sbjct 2275947 GGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCAT 2275888 Query 117111 TGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 ||| |||||||| |||| || | | || ||||| || |||||||| || || Sbjct 2275887 GTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACCGGCATTGAAGAGTGTGGG 2275828 Query 117171 TGTCGCGTGGATGAA 117185 | |||||| |||| Sbjct 2275827 GGAAGCGTGGGTGAA 2275813 >seq3 Length=5051094 Score = 102 bits (112), Expect = 1e-16 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||||||||| |||||||| || || |||||| |||||| ||||| || || Sbjct 937339 GTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCC 937280 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | |||| ||| ||| ||||| ||||| ||| Sbjct 937279 ACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGC 937220 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAG 127681 ||||| |||| || |||| || || ||| Sbjct 937219 GGCGAAGGCAACCAGGCGCTGAGCGAAAGAG 937189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506387102960