Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq6 242 5e-59
seq3 102 1e-16
>seq6
Length=3061052
Score = 242 bits (268), Expect = 5e-59
Identities = 1081/1695 (64%), Gaps = 53/1695 (3%)
Strand=Plus/Minus
Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578
|||| | |||| ||||||||| ||| ||||| | || ||||||||||| || |||
Sbjct 2277482 TCAACGGTGAATTGAATGGGTGCCGCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 2277423
Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638
||||| || |||||||| || | ||||| || | ||| | || |||
Sbjct 2277422 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTACCCATGGTAGGATCC 2277363
Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698
| |||| | ||| | ||| ||||| || ||||| || ||||| || |||||
Sbjct 2277362 TTCATGTGAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATC 2277303
Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758
| | || | | | ||| ||||| || || ||||||| |||| |||||| |
Sbjct 2277302 TGCACAACTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCA 2277243
Query 115759 GGGATATCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATA 115815
||||||| || || || ||||||||| | || ||| || ||| ||||||
Sbjct 2277242 GGGATATTGGGAATGTTCTGAATAGAGCCATTCTCAGCAATGA---TGCGATTCTTCATG 2277186
Query 115816 TCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAAC 115871
| | ||||||||||| || | ||||||| | || | | | ||||| ||
Sbjct 2277185 GCATCCGACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGG----TTGACGAC 2277130
Query 115872 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCA 115931
|||||||| || | | |||||| | || ||||||| ||||| || ||||||||
Sbjct 2277129 CTGGAACTCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCA 2277070
Query 115932 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 115991
|||||||| || | ||||| | || ||||||||||||||| || | || | |||
Sbjct 2277069 TTCATTGTTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCT 2277010
Query 115992 GTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 116051
|||||||| ||| | || | | | || ||| | ||||| || | |
Sbjct 2277009 GTTGCGGATACCGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGA 2276950
Query 116052 TGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111
|| || | | | |||||| |||||||| ||||| || | ||| || || ||||||| ||
Sbjct 2276949 TGGCTTCACGTTCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAA 2276890
Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCA----ATTCGGAGCTCGCCTCGAGGGCTGCGT 116167
|| ||| || ||||||| | | || | | || ||| || | | ||| ||||
Sbjct 2276889 TGACTCGTAAGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGC-CGTC---AAGGCGGCGT 2276834
Query 116168 GATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGA 116227
| || || || ||||| || | |||| | |||||| || || || | ||
Sbjct 2276833 GGTAAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGA 2276774
Query 116228 GAC---GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 116284
| | || ||| || |||| ||||||||||| ||||| | |||||| || || |
Sbjct 2276773 GTCTCAGGGCCAA---GAAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGT 2276717
Query 116285 GTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTAT 116344
| | ||| || ||||| || || ||||| || || || || | | |
Sbjct 2276716 GACGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGT 2276657
Query 116345 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 116404
| ||||| | ||| |||| |||| ||||| ||||| | | |||| | | ||
Sbjct 2276656 TGAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGC--- 2276600
Query 116405 TCTCTTCATTGACATACTTAGGA----AGGGCGATTGACGCCAGATTACACACAGAGGTC 116460
||| | | | || || |||| || || | || ||||| || || || | |
Sbjct 2276599 CCTCGTTGTAGTCA-ACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACC 2276541
Query 116461 TCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCC 116520
|| || | |||||| || || || || || | || ||||| || || ||
Sbjct 2276540 TCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCG 2276481
Query 116521 AAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCC 116580
| |||||| || || ||| ||| || ||||||||||||||| | || | ||
Sbjct 2276480 AGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCG 2276421
Query 116581 GTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT 116639
||||| || |||| || |||||||| | ||| | | || | | || | | || |
Sbjct 2276420 GTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTG-ATGGTCTTGCG 2276362
Query 116640 GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CT 116698
| | || ||||| ||||||||| || | |||||||||||| || || ||| |
Sbjct 2276361 GCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTC-GCCGTAGCAGT 2276303
Query 116699 CTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCC 116758
| | || ||||| || || || || | || | ||| | || || ||| || |
Sbjct 2276302 CGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACAC 2276243
Query 116759 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTT 116818
|||||||||| || |||||||||||||| ||| |||| ||||| ||| ||| |||| |
Sbjct 2276242 GCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCT 2276183
Query 116819 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCA 116878
| | || || || |||||| || | || || | | || || ||||| || || |
Sbjct 2276182 CCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAA 2276123
Query 116879 GGTACACCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCG 116932
| || | || | | || |||| ||| |||||| ||||| || ||||
Sbjct 2276122 GATAGATGGCAAAGGCGCCAGGACGCTTG---TTGCCACCCTGGTCAACATATCTAGCCG 2276066
Query 116933 TTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA 116992
| ||| || || |||||||| || | | ||| | ||| || || || || ||
Sbjct 2276065 TGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAA 2276006
Query 116993 --TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTT 117050
|| || || | | || | || ||||| || | || ||||| || ||| ||
Sbjct 2276005 TGTAGGA-ACCAG-TAGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTT 2275948
Query 117051 TGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATT 117110
||||| ||||| | |||| || | ||||| ||||| || |||| |||| |
Sbjct 2275947 GGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCAT 2275888
Query 117111 TGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170
||| |||||||| |||| || | | || ||||| || |||||||| || ||
Sbjct 2275887 GTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACCGGCATTGAAGAGTGTGGG 2275828
Query 117171 TGTCGCGTGGATGAA 117185
| |||||| ||||
Sbjct 2275827 GGAAGCGTGGGTGAA 2275813
>seq3
Length=5051094
Score = 102 bits (112), Expect = 1e-16
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
|||||| ||||||||||| |||||||| || || |||||| |||||| ||||| || ||
Sbjct 937339 GTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCC 937280
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||| | |||||| || | |||| ||| ||| ||||| ||||| |||
Sbjct 937279 ACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGC 937220
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAG 127681
||||| |||| || |||| || || |||
Sbjct 937219 GGCGAAGGCAACCAGGCGCTGAGCGAAAGAG 937189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506387102960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |