Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq6 114 2e-20 >seq6 Length=3061052 Score = 114 bits (126), Expect = 2e-20 Identities = 451/686 (66%), Gaps = 25/686 (4%) Strand=Plus/Minus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| ||| |||||||| | |||||| || | ||| |||| Sbjct 2276475 CTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTC 2276416 Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045 |||| | ||| ||||| | ||||| | | |||| | ||||| | || Sbjct 2276415 AGTCTGGGCCTCG-AGAATAGAGTACCACAGCTTCTGGGCCTTGATGGTCTTGCGGC-CG 2276358 Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105 | |||| | |||||| || |||| ||| |||| || ||||| ||| Sbjct 2276357 --CGACCCTCGCT-CTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCG 2276301 Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCT 205164 ||| ||||| || | ||||| |||||||| | ||| | | || ||| || | Sbjct 2276300 GCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCG-ACACG 2276242 Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| ||||| || |||||| ||| | | || |||||||| || | || | | || Sbjct 2276241 CTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTC 2276182 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| |||||| || || || | | |||||| ||||| ||||| | Sbjct 2276181 CTTGCCGTGGTTCTTACGCAAGTCGAGG-AACTCGAATACGTCGGCATGCCATGGCTCAA 2276123 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | ||| | ||||| || | |||||| ||||||||||| || | || | | Sbjct 2276122 GATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGT 2276063 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||||| || || ||||| || ||||||||||||| || ||||| || | | ||| Sbjct 2276062 TGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGT 2276003 Query 205404 CCGAGCCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGC 205461 || || ||| | | || |||| | | ||| || ||||||| |||| Sbjct 2276002 AGGAACCAGTAGCACGGATGCGGTGGACGTTG--AGGCCGATACCGCCAGCCATTTTGGA 2275945 Query 205462 GATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTG 205520 |||| |||||| ||||| || ||| ||||| || | ||| || ||| || || Sbjct 2275944 GATCATGGCGCAGGTCTTG-AGGGTGTCATAGATACCATCAATGCTGTCATCCTTCA-TG 2275887 Query 205521 TC-ACCAGATAGCACGAAGCCAGCTTGG-CAAAGTTGGTGCCCGCGTGGAAGAGCGTGGG 205578 || ||||| |||| || | ||||| || | || || || || | |||||| ||||| Sbjct 2275886 TCGACCAGGAAGCAAGAGGACAGCTGGGACTGAG-GAGTACCGGCATTGAAGAGTGTGGG 2275828 Query 205579 GCTGGCGTGGCTGAAGCGCTT-CTCG 205603 | |||||| ||||| ||| |||| Sbjct 2275827 GGAAGCGTGGGTGAAGAACTTGCTCG 2275802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154146419360