Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 2e-20
>seq6
Length=3061052
Score = 114 bits (126), Expect = 2e-20
Identities = 451/686 (66%), Gaps = 25/686 (4%)
Strand=Plus/Minus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| |||||| ||||||||| ||| |||||||| | |||||| || | ||| ||||
Sbjct 2276475 CTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTC 2276416
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045
|||| | ||| ||||| | ||||| | | |||| | ||||| | ||
Sbjct 2276415 AGTCTGGGCCTCG-AGAATAGAGTACCACAGCTTCTGGGCCTTGATGGTCTTGCGGC-CG 2276358
Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105
| |||| | |||||| || |||| ||| |||| || ||||| |||
Sbjct 2276357 --CGACCCTCGCT-CTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCG 2276301
Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCT 205164
||| ||||| || | ||||| |||||||| | ||| | | || ||| || |
Sbjct 2276300 GCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCG-ACACG 2276242
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|| ||| ||||| || |||||| ||| | | || |||||||| || | || | | ||
Sbjct 2276241 CTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTC 2276182
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283
| || ||||||| |||||| || || || | | |||||| ||||| ||||| |
Sbjct 2276181 CTTGCCGTGGTTCTTACGCAAGTCGAGG-AACTCGAATACGTCGGCATGCCATGGCTCAA 2276123
Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343
| | ||| | ||||| || | |||||| ||||||||||| || | || | |
Sbjct 2276122 GATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGT 2276063
Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403
|||||| || || ||||| || ||||||||||||| || ||||| || | | |||
Sbjct 2276062 TGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGT 2276003
Query 205404 CCGAGCCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGC 205461
|| || ||| | | || |||| | | ||| || ||||||| ||||
Sbjct 2276002 AGGAACCAGTAGCACGGATGCGGTGGACGTTG--AGGCCGATACCGCCAGCCATTTTGGA 2275945
Query 205462 GATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTG 205520
|||| |||||| ||||| || ||| ||||| || | ||| || ||| || ||
Sbjct 2275944 GATCATGGCGCAGGTCTTG-AGGGTGTCATAGATACCATCAATGCTGTCATCCTTCA-TG 2275887
Query 205521 TC-ACCAGATAGCACGAAGCCAGCTTGG-CAAAGTTGGTGCCCGCGTGGAAGAGCGTGGG 205578
|| ||||| |||| || | ||||| || | || || || || | |||||| |||||
Sbjct 2275886 TCGACCAGGAAGCAAGAGGACAGCTGGGACTGAG-GAGTACCGGCATTGAAGAGTGTGGG 2275828
Query 205579 GCTGGCGTGGCTGAAGCGCTT-CTCG 205603
| |||||| ||||| ||| ||||
Sbjct 2275827 GGAAGCGTGGGTGAAGAACTTGCTCG 2275802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154146419360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |