Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 3e-27
seq5 118 2e-21
seq7 96.9 8e-15
>seq3
Length=5051094
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || |||||| || | ||||||||| |||||| | |||||
Sbjct 3316527 AGGACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCC 3316468
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || |||||||| |||||||||||||| || || || || |||
Sbjct 3316467 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 3316408
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||||||| |||| ||| || | | ||| || ||||| || || ||
Sbjct 3316407 TGAATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTT 3316348
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || || |||||
Sbjct 3316347 TTACCCGTCAGGGTCTTGACGAAGATTTG 3316319
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||||||||| || |||||||| |||| ||||||||| | || || | ||||||
Sbjct 3315843 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 3315784
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| || ||||| | |||||||||||| ||| ||| || || |||
Sbjct 3315783 TCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 3315724
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| || |||| ||| || | | || || || | ||||| |||
Sbjct 3315723 TGAATCTTCGACTTGACATTGTCGATGGTATCAGAGCTCTCGACCTCGAGAGTGATGGTC 3315664
Query 199598 TTACCCGT 199605
|| || ||
Sbjct 3315663 TTGCCGGT 3315656
Score = 100 bits (110), Expect = 7e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| || | ||||||||| ||| || | || || || || ||||| || || |||
Sbjct 3316278 TCCTTCTGAATGTTGTAGTCGCTCAAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAG 3316219
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
|| |||||||| ||||| ||| || || || || || ||||| |||||||
Sbjct 3316218 ATAAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTG 3316159
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618
|| | ||||||| || || || ||||||||||||||||| || || || || || ||
Sbjct 3316158 TCAATCGTGTCTGATGACTCGACTTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACG 3316099
Query 199619 AAAATTTG 199626
|| |||||
Sbjct 3316098 AAGATTTG 3316091
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || ||||| || |||||||| |||| ||||||||| | | || | || ||
Sbjct 3316071 AGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 3316012
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || || ||||| || || ||||||||||| ||| || || || ||
Sbjct 3316011 TCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCT 3315952
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| || |||| ||||| | | || || || | |||||||||
Sbjct 3315951 TGGATCTTTGACTTGACATTGTCGATCGTGTCGGAGCTCTCAACCTCGAGAGTGATCGTC 3315892
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || || ||||| ||
Sbjct 3315891 TTGCCTGTCAAGGTCTTGACGAAAATCTG 3315863
>seq5
Length=3459663
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | ||| || || |||||||| |||| ||||||||| | | ||
Sbjct 1049165 CGCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 1049106
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||||||||||||||| || ||||||||||| || || ||
Sbjct 1049105 CGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCC 1049046
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| |||||| | | || || || |
Sbjct 1049045 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGG 1048986
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| |||||||||||||| || || || ||||| ||
Sbjct 1048985 GTGATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTG 1048948
>seq7
Length=2782040
Score = 96.9 bits (106), Expect = 8e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| || | ||||||||| | || || | ||||| || |||||||| || || ||||
Sbjct 1279511 CCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1279452
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| |||||||||||||| ||| || || || ||||| ||||| ||| || |
Sbjct 1279451 TCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1279392
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||| | | || || || | ||||| ||||| ||||| || || ||||| |
Sbjct 1279391 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1279332
Query 199620 AAATTTGG 199627
|| | |||
Sbjct 1279331 AACTGTGG 1279324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919998877102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |