Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq6 237 2e-57
seq1 154 2e-32
>seq6
Length=3061052
Score = 237 bits (262), Expect = 2e-57
Identities = 833/1296 (64%), Gaps = 5/1296 (0%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || ||||| | ||| |||||||| || || ||
Sbjct 1844038 TCATCCTCCTCCTTGTACTTCTCGGCATCCGACAGCATGCGCTCAATGTCCTCCTTGGAG 1843979
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || |||||| | ||| || || | | |||| || |
Sbjct 1843978 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 1843919
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || || | ||||| || |||||||| ||||| | || | ||| || || |
Sbjct 1843918 GCGGAGACGTTGATGATACCGTTGGCATCAACGTCGAAGGTAACCTCAATCTGGGGCACA 1843859
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || || | |||| ||| |
Sbjct 1843858 CCACGAGGGGCAGGAGGGATACCAGTGAGCTCGAACTTGCCGAGAAGGTTGTTGTCCTTG 1843799
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| | || ||||| || ||||| | || ||| |||| || || ||
Sbjct 1843798 GTGCGTTGGCGCTCACCCTCGTAGACCTGGATAAGCACACCAGGCTGGTTGTCGGAGAAG 1843739
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | || || || || || | || || | | ||||
Sbjct 1843738 GTAGAGAAGACCTCGGACTTCTTGGTAGGGATGGTGGTGTTGCGAGGGATGAGCTTGGTC 1843679
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| || |||| || | |||||||| | ||||| | ||| | |
Sbjct 1843678 ATCATACCACCAGCGGTCTCGATACCGATGGACAGAGGGGCAACGTCAAGGAGCAGAATC 1843619
Query 6989 TC-TTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045
|| ||| | || | | | || | | || || || || || | || |||
Sbjct 1843618 TCGTTGGTCGACTTGGAAGAAGTGTCGCCAGAGAGAATCGCAGCCTGAACGGCAGCACCG 1843559
Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105
|| || || |||||||| ||||| || | || || | || || ||||| || || ||
Sbjct 1843558 TAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCG 1843499
Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165
| | | | || || ||||| || || || |||||||| | ||||| || |
Sbjct 1843498 GTGATGAGCTTCTGGATACGGGGGATACGGGTGGAACCACCGACGAGGACGATCTCGTGG 1843439
Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225
|| || |||||||| | || || ||||| || | ||
Sbjct 1843438 ACAAGGCTCTTGTCGATCTTAGCATCAGACAGCACGCGGTCGACGGGCTGGATGGTGGAT 1843379
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
||||| | ||| || || ||||| ||||| |||||||| ||||| || ||||| |||
Sbjct 1843378 CGGAAGAGATCCTGGCAAAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCA 1843319
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345
| || ||| | | || || || || || | || || || | ||||| | || |||
Sbjct 1843318 ATACCCTCGAAGAGAGAGTCGATCTCGATCGAGGTCTGAGCAGAAGAAGAGAGGGTACGC 1843259
Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405
|| || ||||| || || || || | |||||| ||||| || ||| | || | |||
Sbjct 1843258 TTGGCACGCTCGCAAGCGGTGCGGAGACGACGCAGGGCTCGGCTGTTGACAGAGAGATCC 1843199
Query 7406 TTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464
||||| || || || || ||||| || | | ||||| || ||| | ||||| ||
Sbjct 1843198 TTCTTGTGCTTGCGCTTGAACTCGTTGACA-AAGTGGTTAACGAGACGGTTGTCGAAGTC 1843140
Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524
|||||||||||||| || || || ||||| | ||||| || |||||||| | || ||
Sbjct 1843139 CTCACCACCCAAGTGAGTGTCACCAGCGGTAGACTTGACCTCGAAGATACCCTCCTCGAT 1843080
Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC 7584
| | | | |||||||| || ||||||||||| || || || ||||| ||||| ||
Sbjct 1843079 GGTCAGGAGGGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTC 1843020
Query 7585 GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644
| | || ||||| || |||||||| || || || || || || ||||| || || ||
Sbjct 1843019 GCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCGGTGGGTTCGTTGATGAT 1842960
Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704
||| || ||| ||||| || || | || || || || || || || || ||
Sbjct 1842959 ACGGAGGACGTTGAGGCCGGCGATCAAACCGGCGTCCTTGGTAGCCTGACGCTGGCTGTC 1842900
Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764
||| |||||||| || || || ||||| |||| |||| | ||||||| || | ||
Sbjct 1842899 GTTGAAGTAGGCGGGAACGGTAACGACAGCGTTGTTGACGGTGGTACCGAGGTAGGCCTC 1842840
Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT 7824
|| | || ||| ||||| || ||||| || || || || || | | || ||
Sbjct 1842839 AGCAGTCTCACGCATCTTGGTGAGGACCATGGAGGAGATTTCCTCGGGGGTGAAGACCTT 1842780
Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
| | ||||| || || || || || || |||| ||
Sbjct 1842779 CTTCTCACCCTTGAACTCGACCTCGATGTTGGGCTT 1842744
Score = 95.1 bits (104), Expect = 2e-14
Identities = 116/158 (73%), Gaps = 3/158 (2%)
Strand=Plus/Minus
Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987
||||| | ||||| |||||||| || || ||||| ||||| | ||||||||||| |
Sbjct 1842624 AACTTGCGGCCGATCAGACGCTTGGCGTCGAAAACGGTGTTGTGAGGGTTCATGGCGACT 1842565
Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047
||||||||||| || || ||||| | ||| || | || || || || ||| ||||
Sbjct 1842564 TGGTTCTTCGCGGCATCACCGATCAAACGCTC---GGTGTCGGTGAAAGCAACGAACGAG 1842508
Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|| || || || || || ||||| || ||||| || ||
Sbjct 1842507 GGCGTTGTGCGGTTACCCTGGTCATTGGCAATGATGTC 1842470
>seq1
Length=6530789
Score = 154 bits (170), Expect = 2e-32
Identities = 348/518 (67%), Gaps = 9/518 (2%)
Strand=Plus/Plus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| |||| | ||| || | |||||| | | ||
Sbjct 5198619 AGGTCCTCGAAACGGGCACGGGTGATGGTCATGGTGAAGTCCTCACCGTCGAAGAGAGAG 5198678
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| |||||||| | || || || | || | || ||||| || ||||| || |
Sbjct 5198679 TCAATCTCAATGGTGGCCTGGGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAG 5198736
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| ||||| | |||||| |||||||| | | ||| | || ||||| || |
Sbjct 5198737 CGGTTCGGAGACGACGGAGGGCACGGGCATCGCCGCTGAGGTCCTTCTTGGTCTTGCCAG 5198796
Query 7422 TAAAC-TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480
||||| | ||| || ||||| | || | | |||||| |||| ||||||||||||
Sbjct 5198797 TAAACGTTTTCTTGCAATGGTCGA-GTAGGTTGGTATCGAAGTCTTGACCACCCAAGTGG 5198855
Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540
|| || || ||||| || ||||| |||| ||| || | ||||| | | || |||
Sbjct 5198856 GTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTTCAGGAGGGAGACA 5198915
Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTC 7597
|| || ||||||||||| || || | ||||| ||||| || | || |||
Sbjct 5198916 TCGAAGGTACCACCACCGAGATCGTAGATGAGAACGTTGCGCTCCTTCTCAGACTTGCCG 5198975
Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657
|||||||||| || || || || || || || || || || ||||| || |||
Sbjct 5198976 GAGCCGAGACCGTAGGCAATGGCGGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTG 5199035
Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717
|||||||| || | | || || || || || || || || ||||| ||||||||
Sbjct 5199036 AGGCCAGCGATGGCACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCG 5199095
Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| || | ||| || | | || ||||| |||||
Sbjct 5199096 GGGACAGTGATGACAGCCTTCTCAACCTTCTTTCCGAG 5199133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131958449040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |