Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6 237 2e-57 seq1 154 2e-32 >seq6 Length=3061052 Score = 237 bits (262), Expect = 2e-57 Identities = 833/1296 (64%), Gaps = 5/1296 (0%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | ||| |||||||| || || || Sbjct 1844038 TCATCCTCCTCCTTGTACTTCTCGGCATCCGACAGCATGCGCTCAATGTCCTCCTTGGAG 1843979 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | ||| || || | | |||| || | Sbjct 1843978 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 1843919 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || || | ||||| || |||||||| ||||| | || | ||| || || | Sbjct 1843918 GCGGAGACGTTGATGATACCGTTGGCATCAACGTCGAAGGTAACCTCAATCTGGGGCACA 1843859 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || || | |||| ||| | Sbjct 1843858 CCACGAGGGGCAGGAGGGATACCAGTGAGCTCGAACTTGCCGAGAAGGTTGTTGTCCTTG 1843799 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | || ||||| || ||||| | || ||| |||| || || || Sbjct 1843798 GTGCGTTGGCGCTCACCCTCGTAGACCTGGATAAGCACACCAGGCTGGTTGTCGGAGAAG 1843739 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || || | | |||| Sbjct 1843738 GTAGAGAAGACCTCGGACTTCTTGGTAGGGATGGTGGTGTTGCGAGGGATGAGCTTGGTC 1843679 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || | |||||||| | ||||| | ||| | | Sbjct 1843678 ATCATACCACCAGCGGTCTCGATACCGATGGACAGAGGGGCAACGTCAAGGAGCAGAATC 1843619 Query 6989 TC-TTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || ||| | || | | | || | | || || || || || | || ||| Sbjct 1843618 TCGTTGGTCGACTTGGAAGAAGTGTCGCCAGAGAGAATCGCAGCCTGAACGGCAGCACCG 1843559 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||| ||||| || | || || | || || ||||| || || || Sbjct 1843558 TAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCG 1843499 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | | | | || || ||||| || || || |||||||| | ||||| || | Sbjct 1843498 GTGATGAGCTTCTGGATACGGGGGATACGGGTGGAACCACCGACGAGGACGATCTCGTGG 1843439 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || |||||||| | || || ||||| || | || Sbjct 1843438 ACAAGGCTCTTGTCGATCTTAGCATCAGACAGCACGCGGTCGACGGGCTGGATGGTGGAT 1843379 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | ||| || || ||||| ||||| |||||||| ||||| || ||||| ||| Sbjct 1843378 CGGAAGAGATCCTGGCAAAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCA 1843319 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || ||| | | || || || || || | || || || | ||||| | || ||| Sbjct 1843318 ATACCCTCGAAGAGAGAGTCGATCTCGATCGAGGTCTGAGCAGAAGAAGAGAGGGTACGC 1843259 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| || || || || | |||||| ||||| || ||| | || | ||| Sbjct 1843258 TTGGCACGCTCGCAAGCGGTGCGGAGACGACGCAGGGCTCGGCTGTTGACAGAGAGATCC 1843199 Query 7406 TTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464 ||||| || || || || ||||| || | | ||||| || ||| | ||||| || Sbjct 1843198 TTCTTGTGCTTGCGCTTGAACTCGTTGACA-AAGTGGTTAACGAGACGGTTGTCGAAGTC 1843140 Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524 |||||||||||||| || || || ||||| | ||||| || |||||||| | || || Sbjct 1843139 CTCACCACCCAAGTGAGTGTCACCAGCGGTAGACTTGACCTCGAAGATACCCTCCTCGAT 1843080 Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC 7584 | | | | |||||||| || ||||||||||| || || || ||||| ||||| || Sbjct 1843079 GGTCAGGAGGGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTC 1843020 Query 7585 GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 | | || ||||| || |||||||| || || || || || || ||||| || || || Sbjct 1843019 GCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCGGTGGGTTCGTTGATGAT 1842960 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 ||| || ||| ||||| || || | || || || || || || || || || Sbjct 1842959 ACGGAGGACGTTGAGGCCGGCGATCAAACCGGCGTCCTTGGTAGCCTGACGCTGGCTGTC 1842900 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| |||||||| || || || ||||| |||| |||| | ||||||| || | || Sbjct 1842899 GTTGAAGTAGGCGGGAACGGTAACGACAGCGTTGTTGACGGTGGTACCGAGGTAGGCCTC 1842840 Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT 7824 || | || ||| ||||| || ||||| || || || || || | | || || Sbjct 1842839 AGCAGTCTCACGCATCTTGGTGAGGACCATGGAGGAGATTTCCTCGGGGGTGAAGACCTT 1842780 Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 | | ||||| || || || || || || |||| || Sbjct 1842779 CTTCTCACCCTTGAACTCGACCTCGATGTTGGGCTT 1842744 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/158 (73%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 ||||| | ||||| |||||||| || || ||||| ||||| | ||||||||||| | Sbjct 1842624 AACTTGCGGCCGATCAGACGCTTGGCGTCGAAAACGGTGTTGTGAGGGTTCATGGCGACT 1842565 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 ||||||||||| || || ||||| | ||| || | || || || || ||| |||| Sbjct 1842564 TGGTTCTTCGCGGCATCACCGATCAAACGCTC---GGTGTCGGTGAAAGCAACGAACGAG 1842508 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || || || || ||||| || ||||| || || Sbjct 1842507 GGCGTTGTGCGGTTACCCTGGTCATTGGCAATGATGTC 1842470 >seq1 Length=6530789 Score = 154 bits (170), Expect = 2e-32 Identities = 348/518 (67%), Gaps = 9/518 (2%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| |||| | ||| || | |||||| | | || Sbjct 5198619 AGGTCCTCGAAACGGGCACGGGTGATGGTCATGGTGAAGTCCTCACCGTCGAAGAGAGAG 5198678 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||||||| | || || || | || | || ||||| || ||||| || | Sbjct 5198679 TCAATCTCAATGGTGGCCTGGGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAG 5198736 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | ||||| | |||||| |||||||| | | ||| | || ||||| || | Sbjct 5198737 CGGTTCGGAGACGACGGAGGGCACGGGCATCGCCGCTGAGGTCCTTCTTGGTCTTGCCAG 5198796 Query 7422 TAAAC-TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||| | ||| || ||||| | || | | |||||| |||| |||||||||||| Sbjct 5198797 TAAACGTTTTCTTGCAATGGTCGA-GTAGGTTGGTATCGAAGTCTTGACCACCCAAGTGG 5198855 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || ||||| || ||||| |||| ||| || | ||||| | | || ||| Sbjct 5198856 GTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTTCAGGAGGGAGACA 5198915 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTC 7597 || || ||||||||||| || || | ||||| ||||| || | || ||| Sbjct 5198916 TCGAAGGTACCACCACCGAGATCGTAGATGAGAACGTTGCGCTCCTTCTCAGACTTGCCG 5198975 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 |||||||||| || || || || || || || || || || ||||| || ||| Sbjct 5198976 GAGCCGAGACCGTAGGCAATGGCGGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTG 5199035 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 |||||||| || | | || || || || || || || || ||||| |||||||| Sbjct 5199036 AGGCCAGCGATGGCACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCG 5199095 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| || | ||| || | | || ||||| ||||| Sbjct 5199096 GGGACAGTGATGACAGCCTTCTCAACCTTCTTTCCGAG 5199133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131958449040