Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq6 250 3e-61
>seq6
Length=3061052
Score = 250 bits (276), Expect = 3e-61
Identities = 1002/1546 (65%), Gaps = 55/1546 (4%)
Strand=Plus/Minus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA-TACACTTTTG 109565
|| ||||| || || ||||| |||||||||||| ||||| | | | | || |
Sbjct 2277344 GATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAACTTGACGCT-- 2277287
Query 109566 GCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGT 109624
|| | || |||||||| |||||||| | | ||||||||||| | || || | ||||
Sbjct 2277286 GCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATATTGGGAATGT 2277227
Query 109625 TTTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGAC 109681
| |||||||||||| |||| | | || ||| |||||| | | |||||||||||
Sbjct 2277226 TCTGAATAGAGCCATTCTCAGCAATGA---TGCGATTCTTCATGGCATCCGACCAGAGAC 2277170
Query 109682 CGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCA 109737
| | | ||||| | |||| | | |||||| || || ||||||||
Sbjct 2277169 CCATGTCGACCAGATCCTTGAGCAACCA----CGGGTTGACGACCTGGAACTCACCAGCC 2277114
Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797
| |||| |||| ||||| | ||||| ||||| || || ||||||||||| ||
Sbjct 2277113 AAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGA 2277054
Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC 109857
||||| | || ||||||||||||||||| | || | ||||| |||| ||| | |
Sbjct 2277053 ATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGC 2276994
Query 109858 GTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCA 109917
||| ||| ||||||| | | ||||| || | || | | | | | ||||
Sbjct 2276993 TCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATC-CGA----TGGCTTCACGT 2276939
Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977
||| |||| || || || | ||||| | ||||||||| |||||||| ||||||
Sbjct 2276938 TCC-ACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAA 2276880
Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATACATAGTCTC 110036
| |||| | | ||| | ||| |||||| || || || || || || || || ||
Sbjct 2276879 GGGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAG-GCGGCGTGGTAAATGGTTTC 2276821
Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAA 110095
||| || || |||| |||| ||| | |||||||| || | || ||
Sbjct 2276820 AAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAA 2276761
Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155
||| |||| || ||||| |||||||| | |||||||| || || |||||| |
Sbjct 2276760 GAAAG-CATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTGT 2276702
Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215
||| || | |||||||| |||| ||| |||| |||||||| |
Sbjct 2276701 TTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACGA 2276642
Query 110216 CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAAC--GTTTTCGTC-TCCTTATTGA 110272
| || |||| ||||| || || | | ||||| | | |||| | | | ||
Sbjct 2276641 CGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGCCCTCGTTGTAGTCAACGA 2276582
Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332
|| || ||||| | ||| || || ||||| || | |||||| | || ||
Sbjct 2276581 AGGAT---GGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGT 2276525
Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392
| || | || || || || | ||||||||| || || | ||||||||| ||
Sbjct 2276524 ACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGC 2276465
Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452
||| |||||| |||||| ||||||||| | ||| |||| || || ||||| | ||
Sbjct 2276464 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCT 2276405
Query 110453 TGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCT 110509
|||||| | | ||| | | || | ||| || || |||| |||| ||| ||
Sbjct 2276404 CGAGAATAGAGTACCACAGCTTCTG-GGCCTTGATGGTCTTGCGGCCGCGAC-CCTCGCT 2276347
Query 110510 CCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCG 110569
| |||||||| |||||| ||||||| |||| ||||| || | ||||| | |
Sbjct 2276346 C-TCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACC-TGGG 2276289
Query 110570 C-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628
| || | ||| || | |||| ||| | || || ||| || | ||||||||||||
Sbjct 2276288 CACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGA 2276229
Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688
|| || ||||| | ||| ||||||| ||||| |||| | || || | || |||||
Sbjct 2276228 TCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTC 2276169
Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATG 110748
|| | || | || || | | || | |||||||| || ||||||| || | |
Sbjct 2276168 TTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAG 2276109
Query 110749 GATCCCTTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACC 110802
| || | |||| || |||||| |||||| | || ||| |||||||||
Sbjct 2276108 GCGCC---AGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACC 2276052
Query 110803 CTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTG 110862
| ||||| || | | || | |||| || || ||||| ||| ||| | |
Sbjct 2276051 CGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGTA 2275992
Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922
||||| ||| ||||| | | || ||||| || ||| || || || ||
Sbjct 2275991 GCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCAG 2275932
Query 110923 -TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCA 110981
||| |||| || |||| ||||||||||| || |||| || | | || |||||
Sbjct 2275931 GTCT-TGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCA 2275873
Query 110982 AGAAGACATCTGAGGAC-GAGGCGTTCCCGCATTGAAGAGTGTAGG 111026
||| |||| ||| |||| |||| || || |||||||||||||| ||
Sbjct 2275872 AGAGGACAGCTG-GGACTGAGGAGTACCGGCATTGAAGAGTGTGGG 2275828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975219606800
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