Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6 250 3e-61 >seq6 Length=3061052 Score = 250 bits (276), Expect = 3e-61 Identities = 1002/1546 (65%), Gaps = 55/1546 (4%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA-TACACTTTTG 109565 || ||||| || || ||||| |||||||||||| ||||| | | | | || | Sbjct 2277344 GATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAACTTGACGCT-- 2277287 Query 109566 GCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGT 109624 || | || |||||||| |||||||| | | ||||||||||| | || || | |||| Sbjct 2277286 GCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATATTGGGAATGT 2277227 Query 109625 TTTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGAC 109681 | |||||||||||| |||| | | || ||| |||||| | | ||||||||||| Sbjct 2277226 TCTGAATAGAGCCATTCTCAGCAATGA---TGCGATTCTTCATGGCATCCGACCAGAGAC 2277170 Query 109682 CGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCA 109737 | | | ||||| | |||| | | |||||| || || |||||||| Sbjct 2277169 CCATGTCGACCAGATCCTTGAGCAACCA----CGGGTTGACGACCTGGAACTCACCAGCC 2277114 Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797 | |||| |||| ||||| | ||||| ||||| || || ||||||||||| || Sbjct 2277113 AAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGA 2277054 Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC 109857 ||||| | || ||||||||||||||||| | || | ||||| |||| ||| | | Sbjct 2277053 ATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGC 2276994 Query 109858 GTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCA 109917 ||| ||| ||||||| | | ||||| || | || | | | | | |||| Sbjct 2276993 TCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATC-CGA----TGGCTTCACGT 2276939 Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 ||| |||| || || || | ||||| | ||||||||| |||||||| |||||| Sbjct 2276938 TCC-ACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAA 2276880 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATACATAGTCTC 110036 | |||| | | ||| | ||| |||||| || || || || || || || || || Sbjct 2276879 GGGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAG-GCGGCGTGGTAAATGGTTTC 2276821 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAA 110095 ||| || || |||| |||| ||| | |||||||| || | || || Sbjct 2276820 AAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAA 2276761 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 ||| |||| || ||||| |||||||| | |||||||| || || |||||| | Sbjct 2276760 GAAAG-CATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTGT 2276702 Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215 ||| || | |||||||| |||| ||| |||| |||||||| | Sbjct 2276701 TTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACGA 2276642 Query 110216 CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAAC--GTTTTCGTC-TCCTTATTGA 110272 | || |||| ||||| || || | | ||||| | | |||| | | | || Sbjct 2276641 CGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGCCCTCGTTGTAGTCAACGA 2276582 Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332 || || ||||| | ||| || || ||||| || | |||||| | || || Sbjct 2276581 AGGAT---GGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGT 2276525 Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392 | || | || || || || | ||||||||| || || | ||||||||| || Sbjct 2276524 ACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGC 2276465 Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452 ||| |||||| |||||| ||||||||| | ||| |||| || || ||||| | || Sbjct 2276464 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCT 2276405 Query 110453 TGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCT 110509 |||||| | | ||| | | || | ||| || || |||| |||| ||| || Sbjct 2276404 CGAGAATAGAGTACCACAGCTTCTG-GGCCTTGATGGTCTTGCGGCCGCGAC-CCTCGCT 2276347 Query 110510 CCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCG 110569 | |||||||| |||||| ||||||| |||| ||||| || | ||||| | | Sbjct 2276346 C-TCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACC-TGGG 2276289 Query 110570 C-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 | || | ||| || | |||| ||| | || || ||| || | |||||||||||| Sbjct 2276288 CACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGA 2276229 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688 || || ||||| | ||| ||||||| ||||| |||| | || || | || ||||| Sbjct 2276228 TCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTC 2276169 Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATG 110748 || | || | || || | | || | |||||||| || ||||||| || | | Sbjct 2276168 TTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAG 2276109 Query 110749 GATCCCTTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACC 110802 | || | |||| || |||||| |||||| | || ||| ||||||||| Sbjct 2276108 GCGCC---AGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACC 2276052 Query 110803 CTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTG 110862 | ||||| || | | || | |||| || || ||||| ||| ||| | | Sbjct 2276051 CGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGTA 2275992 Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 ||||| ||| ||||| | | || ||||| || ||| || || || || Sbjct 2275991 GCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCAG 2275932 Query 110923 -TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCA 110981 ||| |||| || |||| ||||||||||| || |||| || | | || ||||| Sbjct 2275931 GTCT-TGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCA 2275873 Query 110982 AGAAGACATCTGAGGAC-GAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 ||| |||| ||| |||| |||| || || |||||||||||||| || Sbjct 2275872 AGAGGACAGCTG-GGACTGAGGAGTACCGGCATTGAAGAGTGTGGG 2275828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975219606800