Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq6 289 3e-73
seq3 86.0 7e-12
>seq6
Length=3061052
Score = 289 bits (320), Expect = 3e-73
Identities = 1137/1769 (64%), Gaps = 43/1769 (2%)
Strand=Plus/Minus
Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617
|||| ||||| || ||| |||| || || || |||||||| ||||||||||| |
Sbjct 2277475 TGAATTGAATGGGTGCCGCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTGAGAC 2277416
Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 105677
| | ||||| | | ||||| | || ||| ||| || ||| | ||||
Sbjct 2277415 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTACCCATGGTAGGATCCTTCATGT 2277356
Query 105678 AAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGA 105737
|| || | |||| ||||||||||| |||||| | || ||||| | | |
Sbjct 2277355 GAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAA 2277296
Query 105738 CATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATAT 105797
| | | | ||| ||||| || || ||||||| ||||||||||| | |||||||
Sbjct 2277295 CTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATAT 2277236
Query 105798 CTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCATATCCTTGG 105854
| || || ||||| || || | | || ||| || ||| |||||| | | |
Sbjct 2277235 TGGGAATGTTCTGAATAGAGCCATTCTCAGCAATGA---TGCGATTCTTCATGGCATCCG 2277179
Query 105855 ACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTC 105914
|||| ||||| || | ||||| |||| | | |||||| | | ||||| |
Sbjct 2277178 ACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCAC 2277119
Query 105915 CCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTAC 105974
| || | | | |||| | || ||||| | ||||| ||||||||||||||||| || |
Sbjct 2277118 CAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGC 2277059
Query 105975 CCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGAC 106034
| | ||||| | ||| |||||| ||||| || || | || | ||||| || | ||
Sbjct 2277058 CGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATAC 2276999
Query 106035 CCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACC 106092
| | ||||||| | || || | ||||| || | || | ||| |||||
Sbjct 2276998 CGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACA-GATCCGATGGCTTCACG 2276940
Query 106093 TTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATA 106152
|||| |||| ||||| || || | || | ||| | ||||| |||| |||| ||| ||
Sbjct 2276939 TTCC-ACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTA 2276881
Query 106153 GGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTC 106212
| || || ||| || | ||| ||| || || ||||| || ||||||||
Sbjct 2276880 AGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAGGCGGCGTGGTAAATGGTTTC 2276821
Query 106213 AAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--A 106270
|||||| | |||| ||| || || ||| || || | | || || |
Sbjct 2276820 AAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGG-AGTCTCAGGGCCA 2276762
Query 106271 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 106330
| ||| |||| ||||||||||||||||||| ||||| |||| ||| ||||| ||
Sbjct 2276761 AGAAAG-CATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTG 2276703
Query 106331 TTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 106390
||||| || || ||||| || || |||||||| | ||| ||||| |
Sbjct 2276702 TTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACG 2276643
Query 106391 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 106450
|| | || |||| ||||| || || | |||| | || ||| | | | ||
Sbjct 2276642 ACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGCC---CTCGTTGTAGTCA 2276586
Query 106451 T---ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507
| ||| || || | || |||| |||||||| ||| ||| || | |
Sbjct 2276585 ACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAG 2276526
Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567
||||| | || || || || | ||||||||| || || || | ||||| |||||
Sbjct 2276525 TACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTG 2276466
Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627
||||| |||||| |||||||||||||||| |||| | || ||||| ||||| | |
Sbjct 2276465 CTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCC 2276406
Query 106628 TTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTC 106683
| |||||| | | ||||| | || | | || | |||| || |||| || |||||
Sbjct 2276405 TCGAGAATAGAGTACCACAGCTTCTGGGCCTTG----ATGGTCTTGCGGCCGCGACCCTC 2276350
Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743
||||||||| || | ||| ||||||||||| || ||||| ||||||||
Sbjct 2276349 GCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGG 2276290
Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803
|| | || || | || | ||| | || || ||| || ||||||||||| ||
Sbjct 2276289 GCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAG 2276230
Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTT 106863
||||| ||||| |||| | || ||||| | | ||| | || || | || |||||
Sbjct 2276229 ATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTT 2276170
Query 106864 GAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT 106923
|| || || |||||||| | | || || ||||||||||||||||||| || |
Sbjct 2276169 CTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAA 2276110
Query 106924 AGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| || ||||| ||| | || | ||||| | || ||| ||| || ||
Sbjct 2276109 GGCGCC---AGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGAC 2276053
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037
|||||||| || | | ||| | ||| || || || || ||| || | |
Sbjct 2276052 CCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGT 2275993
Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097
|| | | |||| || | || ||||| |||||| || ||||| || ||
Sbjct 2275992 AGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCA 2275933
Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157
| | || || |||||||||| | || ||| ||||| || ||| ||||||||
Sbjct 2275932 GGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCA 2275873
Query 107158 ACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216
| ||||| ||| || || || ||||| ||||||||||| || || | ||||| |||
Sbjct 2275872 AGAGGACAGCTG-GGACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGA 2275814
Query 107217 ACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 107274
| | |||| ||||| || || ||||| | ||| ||||||| || ||
Sbjct 2275813 --AGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCA 2275756
Query 107275 GATGCCGATGGCCACACGCATAAACATGT 107303
|||||||| || |||||||| | |||||
Sbjct 2275755 GATGCCGACAGCAACACGCATGATCATGT 2275727
>seq3
Length=5051094
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||| ||||| || || || || || || || |||||| || || ||||| || ||
Sbjct 937339 GTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCC 937280
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || | | ||||| ||| ||| ||||||||||| |||
Sbjct 937279 ACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGC 937220
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463
|| || |||| ||||||| ||||| ||| ||| | || | | | |||| || |
Sbjct 937219 GGCGAAGGCAACCAGGCGCTGAGCGAAAGAG-GAGTCCTTATCCTGGATCCATCGGATGG 937161
Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGT 117497
|||| | |||||||| ||| || || || ||
Sbjct 937160 CCCAATCGGCCTTCTTGCGAATGCAAGGGACTGT 937127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980018275440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |