Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6 289 3e-73 seq3 86.0 7e-12 >seq6 Length=3061052 Score = 289 bits (320), Expect = 3e-73 Identities = 1137/1769 (64%), Gaps = 43/1769 (2%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617 |||| ||||| || ||| |||| || || || |||||||| ||||||||||| | Sbjct 2277475 TGAATTGAATGGGTGCCGCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTGAGAC 2277416 Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 105677 | | ||||| | | ||||| | || ||| ||| || ||| | |||| Sbjct 2277415 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTACCCATGGTAGGATCCTTCATGT 2277356 Query 105678 AAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGA 105737 || || | |||| ||||||||||| |||||| | || ||||| | | | Sbjct 2277355 GAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAA 2277296 Query 105738 CATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATAT 105797 | | | | ||| ||||| || || ||||||| ||||||||||| | ||||||| Sbjct 2277295 CTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATAT 2277236 Query 105798 CTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCATATCCTTGG 105854 | || || ||||| || || | | || ||| || ||| |||||| | | | Sbjct 2277235 TGGGAATGTTCTGAATAGAGCCATTCTCAGCAATGA---TGCGATTCTTCATGGCATCCG 2277179 Query 105855 ACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTC 105914 |||| ||||| || | ||||| |||| | | |||||| | | ||||| | Sbjct 2277178 ACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCAC 2277119 Query 105915 CCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTAC 105974 | || | | | |||| | || ||||| | ||||| ||||||||||||||||| || | Sbjct 2277118 CAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGC 2277059 Query 105975 CCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGAC 106034 | | ||||| | ||| |||||| ||||| || || | || | ||||| || | || Sbjct 2277058 CGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATAC 2276999 Query 106035 CCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACC 106092 | | ||||||| | || || | ||||| || | || | ||| ||||| Sbjct 2276998 CGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACA-GATCCGATGGCTTCACG 2276940 Query 106093 TTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATA 106152 |||| |||| ||||| || || | || | ||| | ||||| |||| |||| ||| || Sbjct 2276939 TTCC-ACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTA 2276881 Query 106153 GGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTC 106212 | || || ||| || | ||| ||| || || ||||| || |||||||| Sbjct 2276880 AGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAGGCGGCGTGGTAAATGGTTTC 2276821 Query 106213 AAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--A 106270 |||||| | |||| ||| || || ||| || || | | || || | Sbjct 2276820 AAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGG-AGTCTCAGGGCCA 2276762 Query 106271 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 106330 | ||| |||| ||||||||||||||||||| ||||| |||| ||| ||||| || Sbjct 2276761 AGAAAG-CATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTG 2276703 Query 106331 TTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 106390 ||||| || || ||||| || || |||||||| | ||| ||||| | Sbjct 2276702 TTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACG 2276643 Query 106391 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 106450 || | || |||| ||||| || || | |||| | || ||| | | | || Sbjct 2276642 ACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGCC---CTCGTTGTAGTCA 2276586 Query 106451 T---ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 | ||| || || | || |||| |||||||| ||| ||| || | | Sbjct 2276585 ACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAG 2276526 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | || || || || | ||||||||| || || || | ||||| ||||| Sbjct 2276525 TACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTG 2276466 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 ||||| |||||| |||||||||||||||| |||| | || ||||| ||||| | | Sbjct 2276465 CTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCC 2276406 Query 106628 TTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTC 106683 | |||||| | | ||||| | || | | || | |||| || |||| || ||||| Sbjct 2276405 TCGAGAATAGAGTACCACAGCTTCTGGGCCTTG----ATGGTCTTGCGGCCGCGACCCTC 2276350 Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743 ||||||||| || | ||| ||||||||||| || ||||| |||||||| Sbjct 2276349 GCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGG 2276290 Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803 || | || || | || | ||| | || || ||| || ||||||||||| || Sbjct 2276289 GCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAG 2276230 Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTT 106863 ||||| ||||| |||| | || ||||| | | ||| | || || | || ||||| Sbjct 2276229 ATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTT 2276170 Query 106864 GAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT 106923 || || || |||||||| | | || || ||||||||||||||||||| || | Sbjct 2276169 CTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAA 2276110 Query 106924 AGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | || ||||| ||| | || | ||||| | || ||| ||| || || Sbjct 2276109 GGCGCC---AGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGAC 2276053 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037 |||||||| || | | ||| | ||| || || || || ||| || | | Sbjct 2276052 CCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGT 2275993 Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097 || | | |||| || | || ||||| |||||| || ||||| || || Sbjct 2275992 AGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCA 2275933 Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157 | | || || |||||||||| | || ||| ||||| || ||| |||||||| Sbjct 2275932 GGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCA 2275873 Query 107158 ACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 | ||||| ||| || || || ||||| ||||||||||| || || | ||||| ||| Sbjct 2275872 AGAGGACAGCTG-GGACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGA 2275814 Query 107217 ACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 107274 | | |||| ||||| || || ||||| | ||| ||||||| || || Sbjct 2275813 --AGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCA 2275756 Query 107275 GATGCCGATGGCCACACGCATAAACATGT 107303 |||||||| || |||||||| | ||||| Sbjct 2275755 GATGCCGACAGCAACACGCATGATCATGT 2275727 >seq3 Length=5051094 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || || || || || || || |||||| || || ||||| || || Sbjct 937339 GTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCC 937280 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | | ||||| ||| ||| ||||||||||| ||| Sbjct 937279 ACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGC 937220 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| ||||||| ||||| ||| ||| | || | | | |||| || | Sbjct 937219 GGCGAAGGCAACCAGGCGCTGAGCGAAAGAG-GAGTCCTTATCCTGGATCCATCGGATGG 937161 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGT 117497 |||| | |||||||| ||| || || || || Sbjct 937160 CCCAATCGGCCTTCTTGCGAATGCAAGGGACTGT 937127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980018275440