Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 7e-12 >seq2 Length=5234762 Score = 86.0 bits (94), Expect = 7e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATG 159605 ||| |||||||||||||| || |||| || || || | | | | || | || Sbjct 3856722 TATCATGATTACATATCCTAGCACTTATGGCGTCTTCGAGCCTGAGGTTCGCAAGGTTTG 3856781 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 ||||||| || | |||||||| ||| || | |||||||| || | ||||| || Sbjct 3856782 CGAGATTGTCCACGCACATGGTGGTTTGGTGTACATGGATGGTGCCAACATGAATGCTCA 3856841 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATA 159724 | | || || | | | || | || ||||| ||||| || ||||| ||||| || | Sbjct 3856842 GATCGG-CTTGACATCTCCTGGAGCAATCGGTGCCGATGTTTGCCATCTGAACTTGCACA 3856900 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 |||| || || || ||||| || ||||| |||||||| || || || || ||||| Sbjct 3856901 AGACCTTTTGCATCCCACACGGCGGTGGTGGTCCTGGTGTTGGCCCAATCTGTGTA 3856956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050420832160