Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 7e-12
>seq2
Length=5234762
Score = 86.0 bits (94), Expect = 7e-12
Identities = 162/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATG 159605
||| |||||||||||||| || |||| || || || | | | | || | ||
Sbjct 3856722 TATCATGATTACATATCCTAGCACTTATGGCGTCTTCGAGCCTGAGGTTCGCAAGGTTTG 3856781
Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665
||||||| || | |||||||| ||| || | |||||||| || | ||||| ||
Sbjct 3856782 CGAGATTGTCCACGCACATGGTGGTTTGGTGTACATGGATGGTGCCAACATGAATGCTCA 3856841
Query 159666 GGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATA 159724
| | || || | | | || | || ||||| ||||| || ||||| ||||| || |
Sbjct 3856842 GATCGG-CTTGACATCTCCTGGAGCAATCGGTGCCGATGTTTGCCATCTGAACTTGCACA 3856900
Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780
|||| || || || ||||| || ||||| |||||||| || || || || |||||
Sbjct 3856901 AGACCTTTTGCATCCCACACGGCGGTGGTGGTCCTGGTGTTGGCCCAATCTGTGTA 3856956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050420832160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |