Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq5 134 3e-26
seq3 131 4e-25
seq7 120 7e-22
>seq5
Length=3459663
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| |||| || || | || || ||||||||
Sbjct 1049148 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 1049089
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| || || ||||| || ||||| || || ||
Sbjct 1049088 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 1049029
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || || |||||||||||| ||||| |||||||| | ||||| || ||
Sbjct 1049028 GGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGT 1048969
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 1048968 GAGGGTCTTGACGAAAATCTGCAT 1048945
>seq3
Length=5051094
Score = 131 bits (144), Expect = 4e-25
Identities = 141/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| |||| || || | ||||||||
Sbjct 3315840 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCA 3315781
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| | || || ||||| ||||||||||| || ||||| |||
Sbjct 3315780 AGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 3315721
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || ||||| || || || || || || || || | |||||
Sbjct 3315720 ATCTTCGACTTGACATTGTCGATGGTATCAGAGCTCTCGACCTCGAGAGTGATGGTCTTG 3315661
Query 195112 CCTGTCA 195118
|| ||||
Sbjct 3315660 CCGGTCA 3315654
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || ||||| ||||| ||| | ||| | ||||| ||
Sbjct 3316524 ACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCCTCC 3316465
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| |||||||| || || || ||||| || || || || || ||||| |||
Sbjct 3316464 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGA 3316405
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| || ||||| || ||| || || | ||||| || ||
Sbjct 3316404 ATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTTTTA 3316345
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | ||||||
Sbjct 3316344 CCCGTCAGGGTCTTGACGAAGATTTGCAT 3316316
>seq7
Length=2782040
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| ||||| ||||| |||| || |||| ||||| ||||||||||| || || |||||
Sbjct 1279509 TTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 1279450
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| ||||| || || || ||||| || || || |||||| || ||
Sbjct 1279449 AGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1279390
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|||||||| ||| ||||| || ||||| | ||||| || |||| || || |||||
Sbjct 1279389 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1279331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480093185302
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |