Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq6 412 6e-110
seq3 174 3e-38
>seq6
Length=3061052
Score = 412 bits (456), Expect = 6e-110
Identities = 1222/1860 (66%), Gaps = 86/1860 (5%)
Strand=Plus/Minus
Query 212574 GCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCC- 212629
||||| |||| || || || ||||||||||||||||| || || ||| ||||||
Sbjct 2277458 GCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTGAGACCAAGCTT---CCAGCCA 2277402
Query 212630 GTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCA 212688
||| | |||||| |||| ||| |||| | | || || ||||| ||
Sbjct 2277401 GTGAA-GTGCAT-GCTGGTGA---TCTTACCCATGGTA----GG--ATCCTT------CA 2277359
Query 212689 GATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTA 212748
|| | ||| ||||| ||| ||||| ||||| | | | ||||| ||||| | |
Sbjct 2277358 TGTGAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCA 2277299
Query 212749 TGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGA 212808
| | | ||| |||| |||||| ||||||||| ||| |||| || | ||||
Sbjct 2277298 CAACTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGA 2277239
Query 212809 AGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CAT 212860
||| |||||||| | ||| || || ||||| || | ||| |||
Sbjct 2277238 TATTGGGAATGTTCTGAATAGAGCC-------ATTCTCAGCAATG-ATGCGATTCTTCAT 2277187
Query 212861 GTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTG 212920
| | || |||||| ||| || |||| ||||| || |||||||| | |||
Sbjct 2277186 GGCATCCGACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTG 2277127
Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980
||| ||||| | | || | |||||||||| ||| |||||||| || || | || ||
Sbjct 2277126 GAACTCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTC 2277067
Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040
||||| || ||||| || | || |||||||||||||||||||| ||||| | |||||
Sbjct 2277066 ATTGTTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTT 2277007
Query 213041 CCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG 213100
| | |||||||| || | ||||| || |||| |||| ||||
Sbjct 2277006 GCGGATACCGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCC---------ACAG 2276956
Query 213101 GTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCC 213160
||| |||||||||||||||||||||||||| |||||| | | | || ||
Sbjct 2276955 ATCCGATGGCTTCACGTTCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCC 2276896
Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGC 213220
|| | | || ||| ||||| ||||| ||||| ||||| || ||| || ||| ||
Sbjct 2276895 CTTGAATGACTCGTAAGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAGGCGGC 2276836
Query 213221 GTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGG 213280
|| ||| ||||||||||| |||| | |||| | || ||||| || ||| ||||||
Sbjct 2276835 GTGGTAAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGG 2276776
Query 213281 CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTG 213340
| ||| | ||| ||||||| || || || || || | ||| ||||||| |||
Sbjct 2276775 GAGTCTCAGGGCCAAGAAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTG 2276716
Query 213341 TCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400
| || ||| || | ||||| | |||||| |||| ||| ||||| |||||
Sbjct 2276715 ACGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTT 2276656
Query 213401 GAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCC 213460
||| |||||| | | || | ||||| | ||| | || | || | | | ||||
Sbjct 2276655 GAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTA---GCAGCC 2276599
Query 213461 CCC---GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC 213517
| | || | || || ||||| || | |||||||||||||||||||||||
Sbjct 2276598 CTCGTTGTAGTCAACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTC 2276539
Query 213518 CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAG 213577
| || | | |||||| |||||||||||||| |||||| | |||||| || || ||
Sbjct 2276538 GTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAG 2276479
Query 213578 GTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGG 213636
||||| ||| ||| ||||| | |||| |||||||||||||||| ||||| ||||
Sbjct 2276478 GTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGG 2276420
Query 213637 TCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696
|||| ||||| | | || || | ||| || | | |||||||| | ||
Sbjct 2276419 TCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTGA----TGGTCTTG 2276364
Query 213697 CAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755
| || || | | || |||||||| || || | | | || || | ||| ||
Sbjct 2276363 CGGCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAG 2276304
Query 213756 CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGAC 213814
| |||| || || || ||| ||||| ||| ||||||| ||| || |||| |||
Sbjct 2276303 TCGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTC-GAC 2276245
Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874
| || ||||||||| || |||| ||| || || ||| || || | | | ||
Sbjct 2276244 ACGCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTC 2276185
Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934
||| || ||| || |||| || || || || || | ||| || ||||| |||||
Sbjct 2276184 CTCCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTC 2276125
Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991
| ||||||||||||||||| | || | ||||| |||||||| || || |||
Sbjct 2276124 AAGATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGT 2276065
Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051
||||||||| || || | ||| ||||| |||||||| ||||||||| || || ||
Sbjct 2276064 GTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAAT 2276005
Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACT 214107
|| || || | || | || ||| |||| ||| || || || || || |
Sbjct 2276004 GTAGGAACCAGTAGCAC---GGATGC-GGTGGACGTTGAGGCCGATACCGCCAGCCATTT 2275949
Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167
||||||||||||||||| | | | || || ||| || | ||||||||||| | |
Sbjct 2275948 TGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCA 2275889
Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGAGTTGAAAAGCGT 214225
|| | || |||||| || ||||||| | || ||| || | ||||| || ||
Sbjct 2275888 TGTCGACCAGGAAGCAAGAGGACAGCTGGGAC--TGAGGAGTACCGGCATTGAAGAGTGT 2275831
Query 214226 GGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGG 214285
|||| || ||| | | |||||| | || | ||| | || ||||| | |||
Sbjct 2275830 GGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGCTC 2275771
Query 214286 GATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTAT 214345
|||| || ||| | ||| | ||| | ||||||||| || | ||| |
Sbjct 2275770 AATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTGCTGAGGACGCTCGA- 2275712
Query 214346 GGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
| || ||| | | |||||| ||||| ||||| |||| ||||||||| || |||||
Sbjct 2275711 CGATC--TTGCCGTCAAGCTTGAGGAGGTACGAGCGTTCCAAAGTCTTGAAGCCGAAGTA 2275654
>seq3
Length=5051094
Score = 174 bits (192), Expect = 3e-38
Identities = 344/503 (68%), Gaps = 7/503 (1%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || | || | ||||| |||||||| ||||| || ||| |||||||||||
Sbjct 937642 CTGGTAATCAGCTACCCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 937583
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| || || | | | ||| ||||| | ||||
Sbjct 937582 CATGAAGTCGAAGGGGTTGGAGACCTTGTAGATCT-TCTCATTGCCCAGAGCAACGAGCA 937524
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| ||||||||||| |||| ||||| | ||| ||||| ||||||||| | || |
Sbjct 937523 AGCGATCCGCGACGAACTCAATGTACTGCTTCATCAGGGTAGAGTTCATGCCGAGAAGAG 937464
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
|||||| |||| || | || |||| ||| || ||||| || | |||||
Sbjct 937463 CGCAGGGCAATGCCTCAGTCAAGAATTCCTGCTCGATTGTGACGGCATCGGTGATAATCT 937404
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCG-CAGGTGCTTGGCATAGAGCATGCAGGCA 48136
|| || ||| || || || | ||| |||||| | |||||| ||||||
Sbjct 937403 CCTGAATGCGCTGCT-TGCTGGGGCGATGCTTCAGGTGAGAGA---AGAGCAGGCAGGCG 937348
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
||||| |||| | ||| ||||| || ||||||| ||||||||||| ||||| |||
Sbjct 937347 AAGTCGGTGTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 937288
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|| | || | || ||||||||||| |||| ||||| | ||| ||| ||||| |||
Sbjct 937287 ATCAGGCCACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCC 937228
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316
|| || || ||||| || || | || ||||||| | || ||| || ||||||
Sbjct 937227 TCGACAGCGGCGAAGGCAACCAGGCGCTGAGCGAAAGAGGAGTCCTTATCCTGGATCCAT 937168
Query 48317 GAAAGCGCCCAGTCTGCCTTCTT 48339
| ||||| || ||||||||
Sbjct 937167 CGGATGGCCCAATCGGCCTTCTT 937145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531565719040
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