Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq6 300 3e-76
seq3 134 3e-26
>seq6
Length=3061052
Score = 300 bits (332), Expect = 3e-76
Identities = 850/1280 (66%), Gaps = 47/1280 (4%)
Strand=Plus/Minus
Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGG 221474
||||| ||| |||||||| ||||| ||||||||| |||||| | ||| | |||||||
Sbjct 2276847 CGTCAAGGCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTTCAA-CTCACGAGCCTCGG 2276789
Query 221475 GAGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
| || |||||| | | ||| | ||||| | || || || || || || || |
Sbjct 2276788 GTGACTCGAAGGGGAGTCTCAGGGCCAAGAAAG-CATCAGCGAGACCTTGAACACCCACG 2276730
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||| | | ||||| | ||| | || |||| ||||| || |||||
Sbjct 2276729 CCAATGGGTCGGTGACGCATGTTGCTGTTTCGGGC-CTCCTGG-ACGGGGTAGTGGTTGA 2276672
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
|||| || | |||||||| || | || ||| | | ||||| ||||||||||
Sbjct 2276671 CGTCAATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGA 2276612
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
|| | | || ||| |||| | | || || || | || || |
Sbjct 2276611 AATCGTA---------GCAGCCCTCGTTGTAG---TCAACGAAGGATGGCAGAGCCAGAG 2276564
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
|||||||| || |||||||||||||| | | |||| |||||||| || ||||
Sbjct 2276563 AAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGA 2276504
Query 221772 GGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-T 221828
||||| | |||| ||| || || |||| || || || |||||| ||| ||| | |
Sbjct 2276503 GGTTG--GAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGAT 2276447
Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888
||||||||||||| ||||| || ||||| ||| ||| | ||||| || ||| |
Sbjct 2276446 CCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCACA 2276387
Query 221889 GTTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAG 221947
| | ||||| || | || | | || ||||||| ||| | | | | || |
Sbjct 2276386 GCT-TCTGGGCCTTGATGGTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCA-TACAA 2276329
Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007
|| | |||||| || ||||| ||| |||| ||||| ||| ||| ||||||
Sbjct 2276328 GGCCT--CAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGGGCACATC 2276271
Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067
|| |||||| ||| | | ||| | || |||||| || || |||||||| || |||
Sbjct 2276270 AGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGGCC 2276211
Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127
|| ||||| | | || |||||| ||||| ||| || | || || | |||
Sbjct 2276210 AAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGAGGAAC 2276151
Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187
|| || | ||| || ||||| ||||| ||||||| ||| | ||||| || |||||||||
Sbjct 2276150 TCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGCTTGTTG 2276091
Query 222188 CCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247
|||||||| || || || || |||||||| ||||| | || ||||| |||
Sbjct 2276090 CCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCG 2276031
Query 222248 TTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC 222307
|||||| |||||||| || |||||| | ||| || | || | | || |||
Sbjct 2276030 TTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCAC---GGATGC-GGTGGAC 2275975
Query 222308 ----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363
| ||||||||| || || ||| ||||||||||||||| ||||||| |||||
Sbjct 2275974 GTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATA 2275915
Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423
||| || || || ||| ||||| | || | ||| || ||||| |||| ||| || |
Sbjct 2275914 GATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTG 2275855
Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483
| | || ||| || || || ||||| ||||| || ||| | || ||||| ||
Sbjct 2275854 AGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAG 2275795
Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCA 222542
| |||||||| | ||| | | |||||||| ||| || | | | || | ||
Sbjct 2275794 GTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCG-ACAGCAACACGCA 2275736
Query 222543 TGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATT 222599
|| ||||| ||| || | ||| || | | || | |||| ||| ||||||||
Sbjct 2275735 TGATCATGTGCTGAGGACGCTCGAC-GATCTTGCCGTCAAGCT--TGAGGAGGTACGAGC 2275679
Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659
||||| ||||||||| || ||||| | || ||||| | | ||| || | |||||
Sbjct 2275678 GTTCCAAAGTCTTGAAGCCGAAGTACTGATAGTTGAAGTCACGGTCGTAGACGATGGCGG 2275619
Query 222660 CGTCCAGCTCCGACTTGTGC 222679
||||| ||| |||||||
Sbjct 2275618 AGTCCAATTCCTCCTTGTGC 2275599
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 221072 TCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCACTTGGAAA 221131
|||| ||| |||||| | || |||| |||||| || | ||| || || |||||
Sbjct 2277182 TCCGACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAAC 2277123
Query 221132 TCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTG 221191
|| || | | || | |||||||| | ||| |||||| | ||||| | || || |||
Sbjct 2277122 TCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTG 2277063
Query 221192 TTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCG 221250
||||| || || || | || ||||| ||||||||||| || ||||||| ||||||||
Sbjct 2277062 TTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCG 2277004
>seq3
Length=5051094
Score = 134 bits (148), Expect = 3e-26
Identities = 127/162 (78%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| ||||| ||||| || ||||| ||||| |||||||||||||| | || || | |
Sbjct 937200 AGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAA 937259
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
|||||||||||||| || || |||||||| ||| ||| |||||||||||||||
Sbjct 937260 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCT 937319
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038
| |||||||| ||||||| || || |||||||||||||
Sbjct 937320 CTCGTGACGAGGGCCTCCACACCGACTTCGCCTGCCTGCTCT 937361
Score = 104 bits (114), Expect = 4e-17
Identities = 163/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || |||||||||||| ||||| |||||
Sbjct 936735 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATCGATCTC 936794
Query 25537 GCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
|||||||| | ||| |||| || ||| | | || ||| || | || ||
Sbjct 936795 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGATGATGAGAAGTACTTCGTCTCT 936854
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | |||| ||||| || ||||| ||||| || || || ||||| ||| |||| ||
Sbjct 936855 CACATCCTGGCTTTCTTCGCTGCCTCGGATGGCATTGTCAATGAGAACCTGGTCGAGCGA 936914
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | | || || ||| | |||||| || |||||||| ||||||||
Sbjct 936915 TTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 936967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843569280640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |