Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-12
>seq3
Length=5051094
Score = 91.5 bits (100), Expect = 1e-12
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||||||||| |||||||||||||| || | ||| || || ||||||||||| || |||||
Sbjct 3315787 ATCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 3315728
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714
||| |||||||| |||||| || || |||||||
Sbjct 3315727 GTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAG 3315690
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||| |||||||| || || || || || || || || || || || || ||| | ||
Sbjct 3316537 ACGGAGACGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTC-GCTCAAAG 3316479
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | ||| || || ||||| ||||| || || ||||| || || ||||| || || |
Sbjct 3316478 TACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATAC 3316419
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729
| |||||||| |||||||| || || || || ||||| || | || |
Sbjct 3316418 CCTCCTTGTCCTGAATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACCTCCA 3316359
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||||||||||| || || ||||| ||||| |||||
Sbjct 3316358 AGGTAATAGTTTTACCCGTCAGGGTCTTGACGAAGATTTG 3316319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268174653145688
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |