Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 9e-11 >seq4 Length=4428529 Score = 82.4 bits (90), Expect = 9e-11 Identities = 171/252 (68%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| | | ||| ||||| || ||||| || ||| || ||||| || || || Sbjct 361394 AGTCCCTGGGGACCGTGATAGATGGCGTAGAAGGCACTCATGTTGGCGAGAAGCGCCTGA 361453 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||||||||| ||||| || || || | | ||| |||||||| | ||| || || Sbjct 361454 GCGGTGCAGATGTTGCTGGTCGCCTTTTCACGGCGAATGTGCTGCTCACGAGTCTGCAGC 361513 Query 139380 GCTAATCTGTA-TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGG 139438 || || ||| || | ||| || |||| ||| || || || | ||| || Sbjct 361514 GC-AAGACGTAGCGCGCGGTTGTTGAGGCGGTCCTTGGACACGCCGACGATGCGGCCGGG 361572 Query 139439 TATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCC 139498 ||||| | ||| |||||||| | || ||||| | ||||| || || |||||||| Sbjct 361573 GATCTTGCGCTTGTACTTGTCGGCGCAGGCGAAGAAGCCGGCATGCGGGCCACCGTATCC 361632 Query 139499 CATAGGAATACC 139510 | ||||| ||| Sbjct 361633 AAGAGGAACACC 361644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997632827120