Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 82.4 9e-11
>seq4
Length=4428529
Score = 82.4 bits (90), Expect = 9e-11
Identities = 171/252 (68%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
||||| | | ||| ||||| || ||||| || ||| || ||||| || || ||
Sbjct 361394 AGTCCCTGGGGACCGTGATAGATGGCGTAGAAGGCACTCATGTTGGCGAGAAGCGCCTGA 361453
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| ||||||||||| ||||| || || || | | ||| |||||||| | ||| || ||
Sbjct 361454 GCGGTGCAGATGTTGCTGGTCGCCTTTTCACGGCGAATGTGCTGCTCACGAGTCTGCAGC 361513
Query 139380 GCTAATCTGTA-TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGG 139438
|| || ||| || | ||| || |||| ||| || || || | ||| ||
Sbjct 361514 GC-AAGACGTAGCGCGCGGTTGTTGAGGCGGTCCTTGGACACGCCGACGATGCGGCCGGG 361572
Query 139439 TATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCC 139498
||||| | ||| |||||||| | || ||||| | ||||| || || ||||||||
Sbjct 361573 GATCTTGCGCTTGTACTTGTCGGCGCAGGCGAAGAAGCCGGCATGCGGGCCACCGTATCC 361632
Query 139499 CATAGGAATACC 139510
| ||||| |||
Sbjct 361633 AAGAGGAACACC 361644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997632827120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |