Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq6 279 6e-70
seq3 86.0 7e-12
>seq6
Length=3061052
Score = 279 bits (308), Expect = 6e-70
Identities = 1056/1638 (64%), Gaps = 33/1638 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || || |||||||| || || ||||||| |||
Sbjct 2275720 CCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTC 2275779
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| || || ||||| |||| | | ||| ||||| | || || ||||
Sbjct 2275780 ATTGAGACGTATAACCTCATGTCGAGCAAGTTCT--TCACCCACGCTTCCCCCACACTCT 2275837
Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||||| ||||| || || || ||| ||||| ||||||||| ||| || |||||
Sbjct 2275838 TCAATGCCGGTACTCCTCAGTCC-CAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGAT 2275896
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||||| || || | | || || ||||| || ||||
Sbjct 2275897 GACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAATGGCT 2275956
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| ||||| || | || |||| | | || | | || ||| || ||
Sbjct 2275957 GGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTACC 2276016
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| || ||| | ||| | | || |||||||| || || ||| ||| || | |||
Sbjct 2276017 AACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGATAT 2276076
Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| | || | || ||||| || || | || |||| | || ||||||
Sbjct 2276077 GTTGACCAGGGTGGCAACAAGCGTCCT---GGCGCCTTTGCCATCTATCTTGAGCCATGG 2276133
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|||||||| | | |||||||| || || || ||||| || | || || | |||
Sbjct 2276134 CATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCGT 2276193
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | ||||| || | |||| ||||| ||||| || ||||||||||| || ||| ||
Sbjct 2276194 GCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAG 2276253
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||| | || | || || | || |||||||| ||||| ||
Sbjct 2276254 AACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGGC 2276313
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGACTGT 75861
||||||||||| ||| | || ||||| || ||| |||||| | | | ||| |
Sbjct 2276314 GAGGAGTTTGAGGCCTTGTATGAGAAGTACGA-GAGCGAGGGTCGCGGCCGCAAGACCAT 2276372
Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
| || | | || | | ||| | |||||||| | | ||||| ||||| || | || |
Sbjct 2276373 -CAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCCT 2276431
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
||||| ||||||||| || ||| ||||| ||||| ||||| | |||||||||
Sbjct 2276432 TCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGAACAATCC 2276491
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
|| || || || ||||| || || | |||||| | || ||| ||| ||||
Sbjct 2276492 GAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTTT 2276551
Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA-CTCGCACTTTT--G 76097
|||| |||| || | || || ||| | || ||| | | | | || | |
Sbjct 2276552 GCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGT---TGACTACAACGAGGGCTGCTACG 2276608
Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157
||| | || || ||||| |||| || | || | ||||| ||| | ||||||
Sbjct 2276609 ATTTCCAGAAGCTGCATGAGGTCACTCAGGTCGTCGTCCGCAATCTCAACAAAATCATTG 2276668
Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217
|| || || ||||| || || ||||| || ||||| ||| |||| ||||
Sbjct 2276669 ACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACCGACCCATTG 2276728
Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA--TTTGATTC 76275
| ||||||||||||||||||| |||| || || | | | || | || || ||
Sbjct 2276729 GCGTGGGTGTTCAAGGTCTCGCTGATGCTTTC--TTGGCCCTGAGACTCCCCTTCGAGTC 2276786
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335
| || || ||| |||| | |||||||||||||| || ||||| || ||
Sbjct 2276787 ACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCGCCTTGAC 2276846
Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395
||| ||| | || ||| || || | || ||| |||| |||| ||||| ||
Sbjct 2276847 GGCTTCGGTTGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAGGGATCTCCTGC 2276906
Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--AC 76453
||| | || | || |||||||| |||||| || ||||| ||| | | || | |
Sbjct 2276907 TTCCGAGGGCATCCTGCAGTTTGACATGTGG-AACGTGAAGCCAT-CGGATCTGTGGGAG 2276964
Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513
||||| | || || | |||||||| | ||| | || ||||| | || | ||
Sbjct 2276965 TGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTGCTGGTAGCT 2277024
Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573
|| ||||| |||||| ||| | ||||| | || || ||||||||||||||||| |||
Sbjct 2277025 CCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTTGAACCTTAC 2277084
Query 76574 ACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC 76633
|| | ||||| |||| |||| | | | || |||||||| | |||||| |
Sbjct 2277085 ACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGTCAACCCGTGG 2277144
Query 76634 CTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 76693
| |||| || || | || ||||||||||| | | |||||| ||| ||| |
Sbjct 2277145 TTGCTCAAGGATCTGGTCGACATGGGTCTCTGGTCGGATGCCATGAAGAATCGCATCATT 2277204
Query 76694 AAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTAC 76753
| | ||| || ||||| || || | ||||||| | ||||||||||| |||||||
Sbjct 2277205 GCTGAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCTGATATCAAGAGTCTCTAC 2277264
Query 76754 CGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGC 76813
|| || ||||| ||| | | | || | | ||||| || |||||||||
Sbjct 2277265 AAGACCGTCTGGGAGATCTCGCAGCGTCAAGTTGTGCAGATGGCTGCTGATCGTGGTGCT 2277324
Query 76814 TTCATTGATCAAAGTCAA 76831
|||||||| ||| ||||
Sbjct 2277325 TTCATTGACCAATCTCAA 2277342
>seq3
Length=5051094
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 65005 ACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTC 65063
|| || || || ||| |||||||| | ||||| || |||| | | | || | |
Sbjct 937127 ACAGTCCCTTGCATTCGCAAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGAC 937186
Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123
|| ||| ||||| ||||||| |||| || || ||| ||||||||||| ||| |||
Sbjct 937187 TC-CTCTTTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGG 937245
Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183
||||| | | || | ||| | |||||||| || || ||||| || || ||||||
Sbjct 937246 CGCATTCGCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTC 937305
Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|| || || || || || || ||||| ||||||
Sbjct 937306 CAACGAGCTCATCTCTCGTGACGAGGGCCTCCAC 937339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568809545280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |