Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6 279 6e-70 seq3 86.0 7e-12 >seq6 Length=3061052 Score = 279 bits (308), Expect = 6e-70 Identities = 1056/1638 (64%), Gaps = 33/1638 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || |||||||| || || ||||||| ||| Sbjct 2275720 CCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTC 2275779 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||| || || ||||| |||| | | ||| ||||| | || || |||| Sbjct 2275780 ATTGAGACGTATAACCTCATGTCGAGCAAGTTCT--TCACCCACGCTTCCCCCACACTCT 2275837 Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||||| ||||| || || || ||| ||||| ||||||||| ||| || ||||| Sbjct 2275838 TCAATGCCGGTACTCCTCAGTCC-CAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGAT 2275896 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | |||||||||| || || | | || || ||||| || |||| Sbjct 2275897 GACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAATGGCT 2275956 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || ||||| || | || |||| | | || | | || ||| || || Sbjct 2275957 GGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTACC 2276016 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || ||| | ||| | | || |||||||| || || ||| ||| || | ||| Sbjct 2276017 AACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGATAT 2276076 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || | || ||||| || || | || |||| | || |||||| Sbjct 2276077 GTTGACCAGGGTGGCAACAAGCGTCCT---GGCGCCTTTGCCATCTATCTTGAGCCATGG 2276133 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 |||||||| | | |||||||| || || || ||||| || | || || | ||| Sbjct 2276134 CATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCGT 2276193 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | ||||| || | |||| ||||| ||||| || ||||||||||| || ||| || Sbjct 2276194 GCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAG 2276253 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||| | || | || || | || |||||||| ||||| || Sbjct 2276254 AACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGGC 2276313 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGACTGT 75861 ||||||||||| ||| | || ||||| || ||| |||||| | | | ||| | Sbjct 2276314 GAGGAGTTTGAGGCCTTGTATGAGAAGTACGA-GAGCGAGGGTCGCGGCCGCAAGACCAT 2276372 Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | || | | || | | ||| | |||||||| | | ||||| ||||| || | || | Sbjct 2276373 -CAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCCT 2276431 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||| ||||||||| || ||| ||||| ||||| ||||| | ||||||||| Sbjct 2276432 TCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGAACAATCC 2276491 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || || || || ||||| || || | |||||| | || ||| ||| |||| Sbjct 2276492 GAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTTT 2276551 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA-CTCGCACTTTT--G 76097 |||| |||| || | || || ||| | || ||| | | | | || | | Sbjct 2276552 GCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGT---TGACTACAACGAGGGCTGCTACG 2276608 Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 ||| | || || ||||| |||| || | || | ||||| ||| | |||||| Sbjct 2276609 ATTTCCAGAAGCTGCATGAGGTCACTCAGGTCGTCGTCCGCAATCTCAACAAAATCATTG 2276668 Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217 || || || ||||| || || ||||| || ||||| ||| |||| |||| Sbjct 2276669 ACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACCGACCCATTG 2276728 Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA--TTTGATTC 76275 | ||||||||||||||||||| |||| || || | | | || | || || || Sbjct 2276729 GCGTGGGTGTTCAAGGTCTCGCTGATGCTTTC--TTGGCCCTGAGACTCCCCTTCGAGTC 2276786 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335 | || || ||| |||| | |||||||||||||| || ||||| || || Sbjct 2276787 ACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCGCCTTGAC 2276846 Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395 ||| ||| | || ||| || || | || ||| |||| |||| ||||| || Sbjct 2276847 GGCTTCGGTTGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAGGGATCTCCTGC 2276906 Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--AC 76453 ||| | || | || |||||||| |||||| || ||||| ||| | | || | | Sbjct 2276907 TTCCGAGGGCATCCTGCAGTTTGACATGTGG-AACGTGAAGCCAT-CGGATCTGTGGGAG 2276964 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513 ||||| | || || | |||||||| | ||| | || ||||| | || | || Sbjct 2276965 TGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTGCTGGTAGCT 2277024 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 || ||||| |||||| ||| | ||||| | || || ||||||||||||||||| ||| Sbjct 2277025 CCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTTGAACCTTAC 2277084 Query 76574 ACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC 76633 || | ||||| |||| |||| | | | || |||||||| | |||||| | Sbjct 2277085 ACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGTCAACCCGTGG 2277144 Query 76634 CTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 76693 | |||| || || | || ||||||||||| | | |||||| ||| ||| | Sbjct 2277145 TTGCTCAAGGATCTGGTCGACATGGGTCTCTGGTCGGATGCCATGAAGAATCGCATCATT 2277204 Query 76694 AAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTAC 76753 | | ||| || ||||| || || | ||||||| | ||||||||||| ||||||| Sbjct 2277205 GCTGAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCTGATATCAAGAGTCTCTAC 2277264 Query 76754 CGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGC 76813 || || ||||| ||| | | | || | | ||||| || ||||||||| Sbjct 2277265 AAGACCGTCTGGGAGATCTCGCAGCGTCAAGTTGTGCAGATGGCTGCTGATCGTGGTGCT 2277324 Query 76814 TTCATTGATCAAAGTCAA 76831 |||||||| ||| |||| Sbjct 2277325 TTCATTGACCAATCTCAA 2277342 >seq3 Length=5051094 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 65005 ACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTC 65063 || || || || ||| |||||||| | ||||| || |||| | | | || | | Sbjct 937127 ACAGTCCCTTGCATTCGCAAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGAC 937186 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 || ||| ||||| ||||||| |||| || || ||| ||||||||||| ||| ||| Sbjct 937187 TC-CTCTTTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGG 937245 Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 ||||| | | || | ||| | |||||||| || || ||||| || || |||||| Sbjct 937246 CGCATTCGCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTC 937305 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || || || || || ||||| |||||| Sbjct 937306 CAACGAGCTCATCTCTCGTGACGAGGGCCTCCAC 937339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568809545280