Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 419 3e-112
seq3 154 2e-32
seq1 145 1e-29
seq7 141 1e-28
>seq6
Length=3061052
Score = 419 bits (464), Expect = 3e-112
Identities = 861/1274 (68%), Gaps = 11/1274 (1%)
Strand=Plus/Plus
Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670
||||||||||| || | ||||| ||||| || || ||||| | | ||||||
Sbjct 1842771 GGTGAGAAGAAGGTCTTCACCCCCGAGGAAATCTCCTCCATGGTCCTCACCAAGATGCGT 1842830
Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730
|||||||| || | | | | |||| || || || | || || || || || || ||
Sbjct 1842831 GAGACTGCTGAGGCCTACCTCGGTACCACCGTCAACAACGCTGTCGTTACCGTTCCCGCC 1842890
Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790
||||||| || || || ||||| || |||||||| | | || || || || |||
Sbjct 1842891 TACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTTTGATCGCCGGCCTCAAC 1842950
Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850
|| | || ||||| ||||| || || ||||| ||||| || ||||| ||||||||
Sbjct 1842951 GTCCTCCGTATCATCAACGAACCCACCGCCGCTGCCATTGCCTACGGTCTTGACAAGAAG 1843010
Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910
|| | || || || | ||||| ||||| ||||||||||| || ||||| ||
Sbjct 1843011 GTCGAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGTGGTACCTTCGATGTTTCC 1843070
Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970
|| || | || || | ||||| ||||| || ||| |||| |||||||| ||||| |
Sbjct 1843071 CTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCTACCGCTGGTGACACTCACTTG 1843130
Query 195971 GGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAA 196029
|||||||| || ||||| ||||| | || |||||| | |||||| || ||
Sbjct 1843131 GGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTTGTC-AACGAGTTCAAGCGCAA 1843189
Query 196030 GAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGA 196089
| | ||||| ||| | |||| || | || || ||||| || | || || || ||
Sbjct 1843190 GCACAAGAAGGATCTCTCTGTCAACAGCCGAGCCCTGCGTCGTCTCCGCACCGCTTGCGA 1843249
Query 196090 ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTT 196149
|||||||| || || ||||||||| | ||||| || | | ||||| || || | ||
Sbjct 1843250 GCGTGCCAAGCGTACCCTCTCTTCTTCTGCTCAGACCTCGATCGAGATCGACTCTCTCTT 1843309
Query 196150 TGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGA 196209
|| || ||||||||||| || | || |||||||| ||||| || ||| | | ||
Sbjct 1843310 CGAGGGTATTGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTTTGCCAGGA 1843369
Query 196210 TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAA 196269
| | || | || | || || || | || || ||| || ||||| || ||
Sbjct 1843370 TCTCTTCCGATCCACCATCCAGCCCGTCGACCGCGTGCTGTCTGATGCTAAGATCGACAA 1843429
Query 196270 GTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACA 196329
| || | || || ||||| || || || || |||||||| || || || |
Sbjct 1843430 GAGCCTTGTCCACGAGATCGTCCTCGTCGGTGGTTCCACCCGTATCCCCCGTATCCAGAA 1843489
Query 196330 GATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGC 196389
| | | | || |||||| || || ||||| | |||||||| ||||| ||
Sbjct 1843490 GCTCATCACCGACTACTTCAACGGAAAGGAGCCCAACAAGTCCATCAACCCTGATGAGGC 1843549
Query 196390 AGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAAT---AA 196446
||||| || ||||| |||||||||||||| |||||||| || |||| | | ||
Sbjct 1843550 TGTTGCCTACGGTGCTGCCGTTCAGGCTGCGATTCTCTC---TGGCGACACTTCTTCCAA 1843606
Query 196447 --CGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGC 196503
|| |||| || ||||||| ||||| ||||| || | ||| | ||| | || || ||
Sbjct 1843607 GTCGACCAACGAGATTCTGCTCCTTGACGTTGCCCCTCTGTCCATCGGTATCGAGACCGC 1843666
Query 196504 GGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACA 196563
|||||| | ||||| || | || | | ||||| || || || || |||||| |
Sbjct 1843667 TGGTGGTATGATGACCAAGCTCATCCCTCGCAACACCACCATCCCTACCAAGAAGTCCGA 1843726
Query 196564 AGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGA 196623
||||| || || | ||||| || || || ||||| | ||| || || || || || ||
Sbjct 1843727 GGTCTTCTCTACCTTCTCCGACAACCAGCCTGGTGTGCTTATCCAGGTCTACGAGGGTGA 1843786
Query 196624 ACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGC 196683
||| || | ||||| ||| | || || || | ||||| | || || || || |
Sbjct 1843787 GCGCCAACGCACCAAGGACAACAACCTTCTCGGCAAGTTCGAGCTCACTGGTATCCCTCC 1843846
Query 196684 TGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCT 196743
||| || | ||||| || |||||| | ||| |||||| | || || || || || |
Sbjct 1843847 TGCCCCTCGTGGTGTGCCCCAGATTGAGGTTACCTTCGACGTTGATGCCAACGGTATCAT 1843906
Query 196744 AAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGA 196803
|||||| | || | || |||| ||||||| || | |||||||| || ||||| ||
Sbjct 1843907 CAACGTCTCCGCCGTCGAGAAGGGCACTGGCAAGTCCAACAAGATTGTCATCACCAACGA 1843966
Query 196804 CAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAG 196863
|||||| || || || |||||||| ||||| || ||| | ||||| || |||||||
Sbjct 1843967 CAAGGGCCGTCTCTCCAAGGAGGACATTGAGCGCATGCTGTCGGATGCCGAGAAGTACAA 1844026
Query 196864 GGAAGAAGACGAGG 196877
||| || || ||||
Sbjct 1844027 GGAGGAGGATGAGG 1844040
>seq3
Length=5051094
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || ||| | || || || || ||||| |||||||||||| ||
Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTCC 3315919
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| | ||||| ||||| ||||| || || || || || |||
Sbjct 3315920 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 3315979
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || ||||| ||||| ||||||||||| || || || |||||| | || ||||||
Sbjct 3315980 CAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 3316039
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||| || || || || ||||| | | || ||||||
Sbjct 3316040 ATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGGT 3316087
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || ||||| |||||||| ||| || || || ||||| || |||| |
Sbjct 3315656 ACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGATACCATCGACAATGTCAAGTCG 3315715
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| || ||||| |||||||| || || ||||| || | || |||||||| ||
Sbjct 3315716 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGATCTTTGCTGGAAAG 3315775
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|||||||||||||| || ||||| | || |||||| | || |||||||| || || |||
Sbjct 3315776 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3315835
Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088
||||| || | || || |||||
Sbjct 3315836 CTTGTGCTTCGCCTCCGAGGTGG 3315858
Score = 140 bits (154), Expect = 4e-28
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || |||||||| || || || ||||| | || || ||||
Sbjct 3316083 GTGGTATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGT 3316142
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| |||||||| || || ||| | || |||||| ||||||||||| ||||| || || |
Sbjct 3316143 CATCAGACACGATTGACAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTG 3316202
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| || || || ||||| |||||||| || || || || || || || ||| | || |
Sbjct 3316203 ACCAACAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGCGACT 3316262
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
||||| |||| ||||| || || ||| | |||||
Sbjct 3316263 ACAACATTCAGAAGGAAAGCACACTGCACTTGGTTCT 3316299
Score = 138 bits (152), Expect = 1e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||||||||| || || ||||| || || |||||||| ||| | ||||| || ||
Sbjct 3316314 GTATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCA 3316373
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
|| || ||||||||| | || ||||||||| || ||||| || || || || || |
Sbjct 3316374 GCGATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACC 3316433
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || || || || |||||||| ||||| || ||||| ||||| | || ||||
Sbjct 3316434 AGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACA 3316493
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
|| |||| |||||| || || ||||| || ||
Sbjct 3316494 ACATTCAGAAGGAGAGCACCCTCCACCTGGTCCT 3316527
Score = 93.3 bits (102), Expect = 6e-14
Identities = 168/242 (69%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
|| || ||||| || ||||| |||| | || || || | ||| || |||| |
Sbjct 3093907 CAGCGCCAGGCCACCAAGGATGCTGGTATCATCGCCGGCTTGAACGTCCTCCGAATCGTG 3093966
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
|| || || || || || || || || ||||||||||||| || | || || | |
Sbjct 3093967 AACGAGCCCACCGCTGCCGCTATCGCCTATGGTCTGGACAGGACAACCGAGGA-GCGCCA 3094025
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
|| || | ||| ||||| ||||||||||| || |||||||| || || | ||||
Sbjct 3094026 GATC-ATCG-TCTACGATCTGGGTGGTGGTACTTTCGATGTCTCCCTCCTGTCTCTTGAC 3094083
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
|||| | ||||| || |||||| || ||||| || || || |||||||| ||||||
Sbjct 3094084 CATGGTGTCTTCGAGGTTCTGGCTACCGCCGGTGACACCCACCTGGGTGGTGAGGATTTC 3094143
Query 195986 GA 195987
||
Sbjct 3094144 GA 3094145
>seq1
Length=6530789
Score = 145 bits (160), Expect = 1e-29
Identities = 469/721 (65%), Gaps = 13/721 (2%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| || || ||||||| || || || ||||| || |||||||| | ||| ||
Sbjct 5199103 ACTGTCCCCGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGTGCCATC 5199044
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| || | || ||||| || || || || || || ||||| || |||
Sbjct 5199043 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCCGCCATTGCCTACGGT 5198984
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| || | || || || | |||| |||||||||||||||
Sbjct 5198983 CTCGGCTCCGGCAAGTCTGAGAAGGAGCGCAACGTTCTCATCTACGATCTCGGTGGTGGT 5198924
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| || || || || | || ||| | ||| || ||||| || |||
Sbjct 5198923 ACCTTCGATGTCTCCCTCCTGAACATCCAGGGCGGTGTCTTCACCGTCAAGGCCACCGCT 5198864
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT 196015
||||| || || | |||||| |||| |||||| | || || || | ||| ||
Sbjct 5198863 GGTGACACCCACTTGGGTGGTCAAGACTTCGATACCAACCTACT-CGACCATTGCAAGAA 5198805
Query 196016 GA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCT 196074
| ||| | | |||| ||||| || | || || | | || || ||||| ||
Sbjct 5198804 AACGTTTACTGGCAAGACCAAGAAGGACCTCAGCGGCGATGCCCGTGCCCTCCGTCGTCT 5198745
Query 196075 TAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTT 196132
| || || || || |||||||| || || || || | || || || | | ||
Sbjct 5198744 CCGAACCGCTTGCGAGCGTGCCAAGCGTACCCTGTC--CAGCGGTGCCCAGGCCACCATT 5198687
Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192
|||||||| || | || ||||| |||||| | || || |||||||| |||||
Sbjct 5198686 GAGATTGACTCTCTCTTCGACGGTGAGGACTTCACCATGACCATCACCCGTGCCCGTTTC 5198627
Query 196193 GAAGAGTTAAACTC--TGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250
|| || | ||| | | | | || | | || ||||| | || || ||
Sbjct 5198626 GAGGACCTTAACGCCAAGGCCTTCTCCGGCA--CCCTCGAGCCTGTCGCCCAGGTCCTCA 5198569
Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310
||||| || || ||| | || || || ||||| || || || || || ||||
Sbjct 5198568 AGGACGCTGCCATCGAGAAGAGTGCCGTCGACGAGATTGTGCTCGTCGGTGGTTCCACCC 5198509
Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370
|||| || |||||||| || | || || |||||||| || | | | || |
Sbjct 5198508 GTATCCCCAAGATTCAGAAGCTCCTGTCCGAGTTCTTCAACGGCAAGAAGCTCGAGAAGA 5198449
Query 196371 CGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAG 196430
|||||||| ||||| || ||||| |||||||| ||||| ||||| | ||| ||||| |
Sbjct 5198448 GCATCAACCCTGATGAGGCTGTTGCCTATGGTGCCGCCGTCCAGGCCGGTATCCTCTCCG 5198389
Query 196431 G 196431
|
Sbjct 5198388 G 5198388
>seq7
Length=2782040
Score = 141 bits (156), Expect = 1e-28
Identities = 140/181 (77%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930
|| ||||| ||||| || || || || |||||||||||||| ||||| || ||||| |||
Sbjct 1279331 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1279390
Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990
|| || |||| ||||||| || || ||||| || || || || || ||||| || ||
Sbjct 1279391 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTG 1279450
Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050
|| |||||||| || ||||| || ||||| || ||||| | || |||||| |||| |||
Sbjct 1279451 ATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAG 1279510
Query 172051 G 172051
|
Sbjct 1279511 G 1279511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861528332320
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