Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq6 419 3e-112 seq3 154 2e-32 seq1 145 1e-29 seq7 141 1e-28 >seq6 Length=3061052 Score = 419 bits (464), Expect = 3e-112 Identities = 861/1274 (68%), Gaps = 11/1274 (1%) Strand=Plus/Plus Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670 ||||||||||| || | ||||| ||||| || || ||||| | | |||||| Sbjct 1842771 GGTGAGAAGAAGGTCTTCACCCCCGAGGAAATCTCCTCCATGGTCCTCACCAAGATGCGT 1842830 Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 |||||||| || | | | | |||| || || || | || || || || || || || Sbjct 1842831 GAGACTGCTGAGGCCTACCTCGGTACCACCGTCAACAACGCTGTCGTTACCGTTCCCGCC 1842890 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || || || ||||| || |||||||| | | || || || || ||| Sbjct 1842891 TACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTTTGATCGCCGGCCTCAAC 1842950 Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 || | || ||||| ||||| || || ||||| ||||| || ||||| |||||||| Sbjct 1842951 GTCCTCCGTATCATCAACGAACCCACCGCCGCTGCCATTGCCTACGGTCTTGACAAGAAG 1843010 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 || | || || || | ||||| ||||| ||||||||||| || ||||| || Sbjct 1843011 GTCGAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGTGGTACCTTCGATGTTTCC 1843070 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || || | || || | ||||| ||||| || ||| |||| |||||||| ||||| | Sbjct 1843071 CTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCTACCGCTGGTGACACTCACTTG 1843130 Query 195971 GGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAA 196029 |||||||| || ||||| ||||| | || |||||| | |||||| || || Sbjct 1843131 GGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTTGTC-AACGAGTTCAAGCGCAA 1843189 Query 196030 GAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGA 196089 | | ||||| ||| | |||| || | || || ||||| || | || || || || Sbjct 1843190 GCACAAGAAGGATCTCTCTGTCAACAGCCGAGCCCTGCGTCGTCTCCGCACCGCTTGCGA 1843249 Query 196090 ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTT 196149 |||||||| || || ||||||||| | ||||| || | | ||||| || || | || Sbjct 1843250 GCGTGCCAAGCGTACCCTCTCTTCTTCTGCTCAGACCTCGATCGAGATCGACTCTCTCTT 1843309 Query 196150 TGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGA 196209 || || ||||||||||| || | || |||||||| ||||| || ||| | | || Sbjct 1843310 CGAGGGTATTGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTTTGCCAGGA 1843369 Query 196210 TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAA 196269 | | || | || | || || || | || || ||| || ||||| || || Sbjct 1843370 TCTCTTCCGATCCACCATCCAGCCCGTCGACCGCGTGCTGTCTGATGCTAAGATCGACAA 1843429 Query 196270 GTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACA 196329 | || | || || ||||| || || || || |||||||| || || || | Sbjct 1843430 GAGCCTTGTCCACGAGATCGTCCTCGTCGGTGGTTCCACCCGTATCCCCCGTATCCAGAA 1843489 Query 196330 GATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGC 196389 | | | | || |||||| || || ||||| | |||||||| ||||| || Sbjct 1843490 GCTCATCACCGACTACTTCAACGGAAAGGAGCCCAACAAGTCCATCAACCCTGATGAGGC 1843549 Query 196390 AGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAAT---AA 196446 ||||| || ||||| |||||||||||||| |||||||| || |||| | | || Sbjct 1843550 TGTTGCCTACGGTGCTGCCGTTCAGGCTGCGATTCTCTC---TGGCGACACTTCTTCCAA 1843606 Query 196447 --CGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGC 196503 || |||| || ||||||| ||||| ||||| || | ||| | ||| | || || || Sbjct 1843607 GTCGACCAACGAGATTCTGCTCCTTGACGTTGCCCCTCTGTCCATCGGTATCGAGACCGC 1843666 Query 196504 GGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACA 196563 |||||| | ||||| || | || | | ||||| || || || || |||||| | Sbjct 1843667 TGGTGGTATGATGACCAAGCTCATCCCTCGCAACACCACCATCCCTACCAAGAAGTCCGA 1843726 Query 196564 AGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGA 196623 ||||| || || | ||||| || || || ||||| | ||| || || || || || || Sbjct 1843727 GGTCTTCTCTACCTTCTCCGACAACCAGCCTGGTGTGCTTATCCAGGTCTACGAGGGTGA 1843786 Query 196624 ACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGC 196683 ||| || | ||||| ||| | || || || | ||||| | || || || || | Sbjct 1843787 GCGCCAACGCACCAAGGACAACAACCTTCTCGGCAAGTTCGAGCTCACTGGTATCCCTCC 1843846 Query 196684 TGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCT 196743 ||| || | ||||| || |||||| | ||| |||||| | || || || || || | Sbjct 1843847 TGCCCCTCGTGGTGTGCCCCAGATTGAGGTTACCTTCGACGTTGATGCCAACGGTATCAT 1843906 Query 196744 AAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGA 196803 |||||| | || | || |||| ||||||| || | |||||||| || ||||| || Sbjct 1843907 CAACGTCTCCGCCGTCGAGAAGGGCACTGGCAAGTCCAACAAGATTGTCATCACCAACGA 1843966 Query 196804 CAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAG 196863 |||||| || || || |||||||| ||||| || ||| | ||||| || ||||||| Sbjct 1843967 CAAGGGCCGTCTCTCCAAGGAGGACATTGAGCGCATGCTGTCGGATGCCGAGAAGTACAA 1844026 Query 196864 GGAAGAAGACGAGG 196877 ||| || || |||| Sbjct 1844027 GGAGGAGGATGAGG 1844040 >seq3 Length=5051094 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||| | || || || || ||||| |||||||||||| || Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTCC 3315919 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| | ||||| ||||| ||||| || || || || || ||| Sbjct 3315920 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 3315979 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| ||||||||||| || || || |||||| | || |||||| Sbjct 3315980 CAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 3316039 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || || || ||||| | | || |||||| Sbjct 3316040 ATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGGT 3316087 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || ||||| |||||||| ||| || || || ||||| || |||| | Sbjct 3315656 ACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGATACCATCGACAATGTCAAGTCG 3315715 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| || ||||| |||||||| || || ||||| || | || |||||||| || Sbjct 3315716 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGATCTTTGCTGGAAAG 3315775 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||||||||| || ||||| | || |||||| | || |||||||| || || ||| Sbjct 3315776 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3315835 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| || | || || ||||| Sbjct 3315836 CTTGTGCTTCGCCTCCGAGGTGG 3315858 Score = 140 bits (154), Expect = 4e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || |||||||| || || || ||||| | || || |||| Sbjct 3316083 GTGGTATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGT 3316142 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| || || ||| | || |||||| ||||||||||| ||||| || || | Sbjct 3316143 CATCAGACACGATTGACAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTG 3316202 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || || || ||||| |||||||| || || || || || || || ||| | || | Sbjct 3316203 ACCAACAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGCGACT 3316262 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| |||| ||||| || || ||| | ||||| Sbjct 3316263 ACAACATTCAGAAGGAAAGCACACTGCACTTGGTTCT 3316299 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || || ||||| || || |||||||| ||| | ||||| || || Sbjct 3316314 GTATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCA 3316373 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 || || ||||||||| | || ||||||||| || ||||| || || || || || | Sbjct 3316374 GCGATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACC 3316433 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || || |||||||| ||||| || ||||| ||||| | || |||| Sbjct 3316434 AGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACA 3316493 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || |||| |||||| || || ||||| || || Sbjct 3316494 ACATTCAGAAGGAGAGCACCCTCCACCTGGTCCT 3316527 Score = 93.3 bits (102), Expect = 6e-14 Identities = 168/242 (69%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 || || ||||| || ||||| |||| | || || || | ||| || |||| | Sbjct 3093907 CAGCGCCAGGCCACCAAGGATGCTGGTATCATCGCCGGCTTGAACGTCCTCCGAATCGTG 3093966 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || || || ||||||||||||| || | || || | | Sbjct 3093967 AACGAGCCCACCGCTGCCGCTATCGCCTATGGTCTGGACAGGACAACCGAGGA-GCGCCA 3094025 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || || | ||| ||||| ||||||||||| || |||||||| || || | |||| Sbjct 3094026 GATC-ATCG-TCTACGATCTGGGTGGTGGTACTTTCGATGTCTCCCTCCTGTCTCTTGAC 3094083 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 |||| | ||||| || |||||| || ||||| || || || |||||||| |||||| Sbjct 3094084 CATGGTGTCTTCGAGGTTCTGGCTACCGCCGGTGACACCCACCTGGGTGGTGAGGATTTC 3094143 Query 195986 GA 195987 || Sbjct 3094144 GA 3094145 >seq1 Length=6530789 Score = 145 bits (160), Expect = 1e-29 Identities = 469/721 (65%), Gaps = 13/721 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||||| || || || ||||| || |||||||| | ||| || Sbjct 5199103 ACTGTCCCCGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGTGCCATC 5199044 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || || || || || ||||| || ||| Sbjct 5199043 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCCGCCATTGCCTACGGT 5198984 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| || | || || || | |||| ||||||||||||||| Sbjct 5198983 CTCGGCTCCGGCAAGTCTGAGAAGGAGCGCAACGTTCTCATCTACGATCTCGGTGGTGGT 5198924 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| || || || || | || ||| | ||| || ||||| || ||| Sbjct 5198923 ACCTTCGATGTCTCCCTCCTGAACATCCAGGGCGGTGTCTTCACCGTCAAGGCCACCGCT 5198864 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT 196015 ||||| || || | |||||| |||| |||||| | || || || | ||| || Sbjct 5198863 GGTGACACCCACTTGGGTGGTCAAGACTTCGATACCAACCTACT-CGACCATTGCAAGAA 5198805 Query 196016 GA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCT 196074 | ||| | | |||| ||||| || | || || | | || || ||||| || Sbjct 5198804 AACGTTTACTGGCAAGACCAAGAAGGACCTCAGCGGCGATGCCCGTGCCCTCCGTCGTCT 5198745 Query 196075 TAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTT 196132 | || || || || |||||||| || || || || | || || || | | || Sbjct 5198744 CCGAACCGCTTGCGAGCGTGCCAAGCGTACCCTGTC--CAGCGGTGCCCAGGCCACCATT 5198687 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 |||||||| || | || ||||| |||||| | || || |||||||| ||||| Sbjct 5198686 GAGATTGACTCTCTCTTCGACGGTGAGGACTTCACCATGACCATCACCCGTGCCCGTTTC 5198627 Query 196193 GAAGAGTTAAACTC--TGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 || || | ||| | | | | || | | || ||||| | || || || Sbjct 5198626 GAGGACCTTAACGCCAAGGCCTTCTCCGGCA--CCCTCGAGCCTGTCGCCCAGGTCCTCA 5198569 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 ||||| || || ||| | || || || ||||| || || || || || |||| Sbjct 5198568 AGGACGCTGCCATCGAGAAGAGTGCCGTCGACGAGATTGTGCTCGTCGGTGGTTCCACCC 5198509 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370 |||| || |||||||| || | || || |||||||| || | | | || | Sbjct 5198508 GTATCCCCAAGATTCAGAAGCTCCTGTCCGAGTTCTTCAACGGCAAGAAGCTCGAGAAGA 5198449 Query 196371 CGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAG 196430 |||||||| ||||| || ||||| |||||||| ||||| ||||| | ||| ||||| | Sbjct 5198448 GCATCAACCCTGATGAGGCTGTTGCCTATGGTGCCGCCGTCCAGGCCGGTATCCTCTCCG 5198389 Query 196431 G 196431 | Sbjct 5198388 G 5198388 >seq7 Length=2782040 Score = 141 bits (156), Expect = 1e-28 Identities = 140/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || || |||||||||||||| ||||| || ||||| ||| Sbjct 1279331 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1279390 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || |||| ||||||| || || ||||| || || || || || ||||| || || Sbjct 1279391 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTG 1279450 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || |||||||| || ||||| || ||||| || ||||| | || |||||| |||| ||| Sbjct 1279451 ATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAG 1279510 Query 172051 G 172051 | Sbjct 1279511 G 1279511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861528332320