Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq6 183 3e-41
seq3 104 2e-17
>seq6
Length=3061052
Score = 183 bits (202), Expect = 3e-41
Identities = 1110/1756 (63%), Gaps = 76/1756 (4%)
Strand=Plus/Minus
Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345
||||| | |||||| || || |||||||| || |||||| ||||| | | |
Sbjct 2277353 ATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAAC- 2277295
Query 138346 TTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGA-TCACGA-ATATGTCGCGGTA 138400
|| || | | |||||||| ||||||||||| ||| || || || | | | ||
Sbjct 2277294 --TTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATA 2277237
Query 138401 TTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGT 138460
||| | ||| || ||||| || || | |||||||||||||| ||||| ||||
Sbjct 2277236 TTG--GGAATGTTCTGAATAGAGCCATTCTCAGCAATGATGCGATTCTTCATGGCATCCG 2277179
Query 138461 TGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCAC 138520
| ||| || | || || || || | || | ||| | |||||| || ||||
Sbjct 2277178 ACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCAC 2277119
Query 138521 CGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTC 138580
| ||||| || || | |||||||||| ||| |||| ||||| |||| ||||| |
Sbjct 2277118 CAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGC 2277059
Query 138581 CCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAAC 138640
| ||||| || | || | || || |||||| || |||| | || || | ||
Sbjct 2277058 CGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATAC 2276999
Query 138641 CGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGT 138700
|||| ||||| | || || | ||| ||||||| ||| || || ||
Sbjct 2276998 CGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTCACGT 2276939
Query 138701 TCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATA 138760
||||||| || |||| | || ||| || ||| || | | | || |||||
Sbjct 2276938 TCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAAG 2276879
Query 138761 CACCAAACTCTTGCGCCAACTCGTTGCTCGCC-TCGAGCGCACCATAGTAAATAGTTTCG 138819
|| ||||| || | ||| ||| || || || | | |||||| |||||
Sbjct 2276878 GGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAG-GCGGCGTGGTAAATGGTTTCA 2276820
Query 138820 GCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTG 138879
||||||| || | | || ||||||| |||| | || | | || | |
Sbjct 2276819 AAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAAG 2276760
Query 138880 AACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCT 138939
|| || || || || ||||| || ||||| || | || || || |||| || |||
Sbjct 2276759 AAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTT----GCT 2276704
Query 138940 TTTGCGG----CTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCAC 138995
|| ||| | | || || || | ||| || || ||||||||||| | ||| || ||
Sbjct 2276703 GTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGAC 2276644
Query 138996 GACCACCTTAGT---CGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGT 139051
||| |||| ||| | |||| | | | | |||||||| |||| |||||| ||
Sbjct 2276643 GACGACCTGAGTGACCTCATGC----AGCTTCTGGAAATCGTAGCAGCCCTCGTTGTAGT 2276588
Query 139052 CGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGT 139111
| |||| | || | | || || | || || | |||||| || ||||| ||||
Sbjct 2276587 CAACGAAG--GA-----TGGCAGAGCCAGA--GAAGCCAGGTTGCAAACGGCCACCTCGT 2276537
Query 139112 CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAAT 139171
| ||| ||| ||| |||| || |||| || | || || ||| || || | |
Sbjct 2276536 CAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGT 2276477
Query 139172 TTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTT 139231
| | || ||||| || ||||| || ||| ||||| ||||| | || | || || |
Sbjct 2276476 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCT 2276417
Query 139232 CCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTAT----TTGACGCACG 139287
| || | ||| | ||| | | ||| | | || | || ||| || ||
Sbjct 2276416 CAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTGATGGTCTTGCGGC-CG 2276358
Query 139288 TAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCA 139347
| | |||| ||||||||| || || | | || || || |||||| |||
Sbjct 2276357 CGAC---CCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCG 2276301
Query 139348 GAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGC 139407
| ||| | | |||| | || ||||| || | ||| |||||||| || ||| |||
Sbjct 2276300 GCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGC 2276241
Query 139408 CTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGC-----CTTCTTAT 139462
||||||||||||| || ||||| | || || | | ||| || || |||| |
Sbjct 2276240 TTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCC 2276181
Query 139463 CTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTT 139522
| ||| | ||||| || || ||||| || || ||||| || |||||||| |
Sbjct 2276180 TTGCCGTGGT--TCTTACG---CAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCT 2276126
Query 139523 CCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAG 139579
| ||||||||||| | ||||| || |||||||| || || || | || | |
Sbjct 2276125 CAAGATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCG 2276066
Query 139580 CATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG- 139638
|| ||||| || || | ||| || |||||||| | | |||||||||||| | |||
Sbjct 2276065 TGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTAC--CGGC 2276008
Query 139639 -ATG--GGA--CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAA 139693
||| ||| | || ||| |||| | || || |||| |||||| ||||| | |
Sbjct 2276007 AATGTAGGAACCAGT----AGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCA 2275952
Query 139694 ATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCC 139752
|||||| || | |||| || | | || || || ||||| |||||||| |||
Sbjct 2275951 TTTTGGAGATCATGGCGCAGGTCTTG-AGGGTGTCATAGATACCATCAATGCTGTCATCC 2275893
Query 139753 TGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGA 139812
| ||| |||||| ||||| || || || || | | || ||||| || ||
Sbjct 2275892 TTCATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACCGGCATTGAAGAGT 2275833
Query 139813 GTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTC 139872
|| || ||||| ||||| | | ||||||| | | ||||| || ||| ||| |
Sbjct 2275832 GTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGC 2275773
Query 139873 ACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCG 139932
|||| | ||| ||| ||||||| || ||||| | ||| || || || |||
Sbjct 2275772 TCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTGCTGAGGACGCTCG 2275713
Query 139933 GCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGT 139990
| | | ||| || | || || || | ||| || | |||||| |||| ||||
Sbjct 2275712 ACGATCTTGCCGTCAAGCTTGAGGAGGTACGAGCGT--TCCAAAGTCTTGAAGCCGAAGT 2275655
Query 139991 ACCTATAGTTGAAATC 140006
|| ||||||||| ||
Sbjct 2275654 ACTGATAGTTGAAGTC 2275639
>seq3
Length=5051094
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| || || || ||| | ||||| || | |
Sbjct 3316088 ATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGTCATCA 3316147
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || ||||| || |||
Sbjct 3316148 GACACGATTGACAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTGACCAA 3316207
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || || || ||||| ||| | || || || |||
Sbjct 3316208 CAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGCGACTACAAC 3316267
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||||| ||||| |||||||| | || ||||| || ||
Sbjct 3316268 ATTCAGAAGGAAAGCACACTGCACTTGGTTCTCCGCTTGCGTGGCGG 3316314
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | || || || || || || ||||| || || | ||
Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTCC 3315919
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||| || || || ||||| || ||
Sbjct 3315920 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 3315979
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| || || || |||||||| ||||| | | | | || || || |||
Sbjct 3315980 CAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 3316039
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || | || | || |||||||| ||
Sbjct 3316040 ATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGG 3316086
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || |||||||||||||| | || || ||| ||| |
Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 3316376 GATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 3316435
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || |||||||||||| | | || || || |||
Sbjct 3316436 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACAAC 3316495
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || || ||| ||||
Sbjct 3316496 ATTCAGAAGGAGAGCACCCTCCACCTGGT 3316524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897003885680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |