Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6 183 3e-41 seq3 104 2e-17 >seq6 Length=3061052 Score = 183 bits (202), Expect = 3e-41 Identities = 1110/1756 (63%), Gaps = 76/1756 (4%) Strand=Plus/Minus Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345 ||||| | |||||| || || |||||||| || |||||| ||||| | | | Sbjct 2277353 ATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAAC- 2277295 Query 138346 TTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGA-TCACGA-ATATGTCGCGGTA 138400 || || | | |||||||| ||||||||||| ||| || || || | | | || Sbjct 2277294 --TTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATA 2277237 Query 138401 TTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGT 138460 ||| | ||| || ||||| || || | |||||||||||||| ||||| |||| Sbjct 2277236 TTG--GGAATGTTCTGAATAGAGCCATTCTCAGCAATGATGCGATTCTTCATGGCATCCG 2277179 Query 138461 TGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCAC 138520 | ||| || | || || || || | || | ||| | |||||| || |||| Sbjct 2277178 ACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCAC 2277119 Query 138521 CGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTC 138580 | ||||| || || | |||||||||| ||| |||| ||||| |||| ||||| | Sbjct 2277118 CAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGC 2277059 Query 138581 CCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAAC 138640 | ||||| || | || | || || |||||| || |||| | || || | || Sbjct 2277058 CGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATAC 2276999 Query 138641 CGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGT 138700 |||| ||||| | || || | ||| ||||||| ||| || || || Sbjct 2276998 CGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTCACGT 2276939 Query 138701 TCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATA 138760 ||||||| || |||| | || ||| || ||| || | | | || ||||| Sbjct 2276938 TCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAAG 2276879 Query 138761 CACCAAACTCTTGCGCCAACTCGTTGCTCGCC-TCGAGCGCACCATAGTAAATAGTTTCG 138819 || ||||| || | ||| ||| || || || | | |||||| ||||| Sbjct 2276878 GGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAG-GCGGCGTGGTAAATGGTTTCA 2276820 Query 138820 GCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTG 138879 ||||||| || | | || ||||||| |||| | || | | || | | Sbjct 2276819 AAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAAG 2276760 Query 138880 AACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCT 138939 || || || || || ||||| || ||||| || | || || || |||| || ||| Sbjct 2276759 AAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTT----GCT 2276704 Query 138940 TTTGCGG----CTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCAC 138995 || ||| | | || || || | ||| || || ||||||||||| | ||| || || Sbjct 2276703 GTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGAC 2276644 Query 138996 GACCACCTTAGT---CGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGT 139051 ||| |||| ||| | |||| | | | | |||||||| |||| |||||| || Sbjct 2276643 GACGACCTGAGTGACCTCATGC----AGCTTCTGGAAATCGTAGCAGCCCTCGTTGTAGT 2276588 Query 139052 CGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGT 139111 | |||| | || | | || || | || || | |||||| || ||||| |||| Sbjct 2276587 CAACGAAG--GA-----TGGCAGAGCCAGA--GAAGCCAGGTTGCAAACGGCCACCTCGT 2276537 Query 139112 CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAAT 139171 | ||| ||| ||| |||| || |||| || | || || ||| || || | | Sbjct 2276536 CAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGT 2276477 Query 139172 TTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTT 139231 | | || ||||| || ||||| || ||| ||||| ||||| | || | || || | Sbjct 2276476 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCT 2276417 Query 139232 CCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTAT----TTGACGCACG 139287 | || | ||| | ||| | | ||| | | || | || ||| || || Sbjct 2276416 CAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTGATGGTCTTGCGGC-CG 2276358 Query 139288 TAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCA 139347 | | |||| ||||||||| || || | | || || || |||||| ||| Sbjct 2276357 CGAC---CCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCG 2276301 Query 139348 GAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGC 139407 | ||| | | |||| | || ||||| || | ||| |||||||| || ||| ||| Sbjct 2276300 GCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGC 2276241 Query 139408 CTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGC-----CTTCTTAT 139462 ||||||||||||| || ||||| | || || | | ||| || || |||| | Sbjct 2276240 TTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCC 2276181 Query 139463 CTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTT 139522 | ||| | ||||| || || ||||| || || ||||| || |||||||| | Sbjct 2276180 TTGCCGTGGT--TCTTACG---CAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCT 2276126 Query 139523 CCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAG 139579 | ||||||||||| | ||||| || |||||||| || || || | || | | Sbjct 2276125 CAAGATAGATGGCAAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCG 2276066 Query 139580 CATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG- 139638 || ||||| || || | ||| || |||||||| | | |||||||||||| | ||| Sbjct 2276065 TGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTAC--CGGC 2276008 Query 139639 -ATG--GGA--CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAA 139693 ||| ||| | || ||| |||| | || || |||| |||||| ||||| | | Sbjct 2276007 AATGTAGGAACCAGT----AGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCA 2275952 Query 139694 ATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCC 139752 |||||| || | |||| || | | || || || ||||| |||||||| ||| Sbjct 2275951 TTTTGGAGATCATGGCGCAGGTCTTG-AGGGTGTCATAGATACCATCAATGCTGTCATCC 2275893 Query 139753 TGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGA 139812 | ||| |||||| ||||| || || || || | | || ||||| || || Sbjct 2275892 TTCATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACCGGCATTGAAGAGT 2275833 Query 139813 GTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTC 139872 || || ||||| ||||| | | ||||||| | | ||||| || ||| ||| | Sbjct 2275832 GTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATACGTCTCAATGACGCGC 2275773 Query 139873 ACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCG 139932 |||| | ||| ||| ||||||| || ||||| | ||| || || || ||| Sbjct 2275772 TCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTGCTGAGGACGCTCG 2275713 Query 139933 GCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGT 139990 | | | ||| || | || || || | ||| || | |||||| |||| |||| Sbjct 2275712 ACGATCTTGCCGTCAAGCTTGAGGAGGTACGAGCGT--TCCAAAGTCTTGAAGCCGAAGT 2275655 Query 139991 ACCTATAGTTGAAATC 140006 || ||||||||| || Sbjct 2275654 ACTGATAGTTGAAGTC 2275639 >seq3 Length=5051094 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || ||| | ||||| || | | Sbjct 3316088 ATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGTCATCA 3316147 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || || ||||| || ||| Sbjct 3316148 GACACGATTGACAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTGACCAA 3316207 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || || || ||||| ||| | || || || ||| Sbjct 3316208 CAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGCGACTACAAC 3316267 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||| ||||| |||||||| | || ||||| || || Sbjct 3316268 ATTCAGAAGGAAAGCACACTGCACTTGGTTCTCCGCTTGCGTGGCGG 3316314 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || || || || ||||| || || | || Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAGAGCTCC 3315919 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| || || || ||||| || || Sbjct 3315920 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 3315979 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || |||||||| ||||| | | | | || || || ||| Sbjct 3315980 CAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 3316039 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || | || | || |||||||| || Sbjct 3316040 ATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGG 3316086 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || |||||||||||||| | || || ||| ||| | Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 3316376 GATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 3316435 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || |||||||||||| | | || || || ||| Sbjct 3316436 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACAAC 3316495 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| || || ||| |||| Sbjct 3316496 ATTCAGAAGGAGAGCACCCTCCACCTGGT 3316524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897003885680