Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6 122 1e-21
seq5 114 2e-19
seq3 111 2e-18
seq1 105 1e-16
>seq6
Length=3061052
Score = 122 bits (134), Expect = 1e-21
Identities = 328/502 (65%), Gaps = 15/502 (3%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| | ||||||| ||| ||||| || |||||||| || || ||||||||
Sbjct 2276085 CTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGA 2276026
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||||| || | || || | ||| || | |||
Sbjct 2276025 TGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGACGTTGAGGCC 2275966
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| ||||| ||| |||||||| | ||||| | || || || || ||||| || ||
Sbjct 2275965 GATACCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATC 2275906
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | ||| ||||| || || || | | | || ||
Sbjct 2275905 AATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCTGGGACTGAGGAGTACC 2275846
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|||||||||||| ||||| | || ||| | ||| |||||| | || ||
Sbjct 2275845 GGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATACGT 2275786
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| | |||||| | | | || ||| || || ||||| || ||
Sbjct 2275785 CTCAATGACGCGCTCAA-----TGTT----GTC------TCCCCAGATGCCGACAGCAAC 2275741
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||||| ||| || |||||||||| | || | |||| ||||| ||
Sbjct 2275740 ACGCATGATCATGTGCTGAGGACGCTCGACGATCTTGCCGTCAAGCTTGAGGAGGTACGA 2275681
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| || ||| | ||| |||||| ||| | ||| || |||| | ||||||
Sbjct 2275680 GCGTTCCAAAGTCTTGAAGCCGAAGTACTGATAGTTGAAGTCACGGTCGTAGACGATGGC 2275621
Query 2074020 GGCGTCGAGGGCCTCCTTGTGC 2074041
|| ||| | |||||||||||
Sbjct 2275620 GGAGTCCAATTCCTCCTTGTGC 2275599
Score = 104 bits (114), Expect = 4e-16
Identities = 290/445 (65%), Gaps = 12/445 (3%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||||||||| ||||||| || ||| | || || ||||||| ||||||
Sbjct 2276524 ACTCGATGATCTCGGTGCAGAGGTTGGA--ACTTCGGATTGTTCCGAGGTTCTTCTGGTT 2276467
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| | ||||| | ||||||| |||||| |||| ||| ||||| |||| ||
Sbjct 2276466 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGC 2276407
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGA-GGTCCT-CG--CGCGGCCCT 2071747
| || || | |||| | || |||| || |||| | || |||| ||||
Sbjct 2276406 CTCGAGAATAGAGTACCACA----GCTTCTGGGCCTTGATGGTCTTGCGGCCGCGACCCT 2276351
Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807
| | ||| ||||| | |||||| ||| ||| ||| || |
Sbjct 2276350 CGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTG 2276291
Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867
| ||| ||||| | || | |||||||||| || | || || ||| ||||
Sbjct 2276290 GGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACA 2276231
Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927
| || |||| ||| | | || ||||| || || || ||||||||||||||||
Sbjct 2276230 GATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGT 2276171
Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987
|||| || |||||| | |||| | |||||| ||||| ||||| || ||| |||||
Sbjct 2276170 TCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAA 2276111
Query 2071988 AGGCGCCCTTGCGCTTGCCGCCGCC 2072012
||||||| |||||| ||| ||
Sbjct 2276110 AGGCGCCAGGACGCTTGTTGCCACC 2276086
>seq5
Length=3459663
Score = 114 bits (126), Expect = 2e-19
Identities = 87/103 (84%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| ||||| |||||| |||||||||| ||| | |
Sbjct 2098042 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACAGCGTGCTTGGCCAGTTCACCGGGGAG 2098101
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573
|| ||||| |||| ||||||||||||||||| | ||| |||
Sbjct 2098102 AATGAGGCGAACGGAGGTCTGGATCTCGCGGGAGGAGATGGTG 2098144
>seq3
Length=5051094
Score = 111 bits (122), Expect = 2e-18
Identities = 183/260 (70%), Gaps = 7/260 (3%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||| ||||| || || | || ||| |||||| |||||||||||||| | |
Sbjct 937655 TGACGCCGGCCTTCTGGTAATCAGCTACCCGCTTCTCGAAGAAGTTGGTCTTGCCACCCA 937596
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTC---GCACC 794007
| ||||| |||||| | ||| ||||||| | |||| |||||| || ||
Sbjct 937595 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAGACCTTGTAGATCTTCTCATTGC-CC 937537
Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067
|||| ||| |||| ||| || |||||||| ||||||||||| ||| |||| | ||
Sbjct 937536 AGAGCAACG--AGCAAGCGATCCGCGACGAACTCAATGTACTGCTTCATCAGGGTAGAGT 937479
Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127
||||||||| || || ||||| | ||| | | || || | |||||| |||||
Sbjct 937478 TCATGCCGAGAAGAGCGCAGGGCAATGCCTCAGTCAAGAATTCCTGCTCGATTGTGACGG 937419
Query 794128 CCTCGATGATGATCTGCCTG 794147
| ||| |||| |||| ||||
Sbjct 937418 CATCGGTGATAATCT-CCTG 937400
Score = 102 bits (112), Expect = 1e-15
Identities = 157/222 (71%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| || | ||||||||| | |||||||| |||| || || |||||||||||
Sbjct 936952 AAGCAACGGGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACCAGGTTCTCATTG 936893
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
|| ||||| || ||| ||||| || || |||| ||| || |||| ||| ||
Sbjct 936892 ACAATGCCATCCGAGGCAGCGAAGAAAGCCAGGATGTGAGAGACGAAGTACTTCTCATCA 936833
Query 796261 TCGCTGAG-CGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317
||| |||| || | ||||| | ||| | ||| |||| |||||||||||||
Sbjct 936832 TCGTTGAGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCCTCGGCGGTC 936773
Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359
|| ||||| ||||||||||| |||||||||| ||| ||| ||
Sbjct 936772 CAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTGT 936731
Score = 102 bits (112), Expect = 1e-15
Identities = 96/120 (80%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 794548 GTGTCGATGGCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606
||||||||||| || |||| ||||||| | | | | ||||||| |||||| |||||
Sbjct 937066 GTGTCGATGGCATTGAACAGGTAGGTCCTT-TGGGTCTGCTCCTTGATGTAGGTATCGAT 937008
Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||| || ||||||||||| ||||||||||| || || |||||||||||| || |||||
Sbjct 937007 GAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 936948
Score = 86.0 bits (94), Expect = 1e-10
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| ||| ||| | |||||| ||| || |||||||| ||||| ||||||
Sbjct 937332 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCCACGCTTC 937273
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| ||||| | ||| ||| ||||||||| |||||||| ||||| |||
Sbjct 937272 TTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGCGGCGAAG 937213
Query 794461 CCGACGAGCCGCTCGGCAAAAG 794482
| || || |||| || ||||
Sbjct 937212 GCAACCAGGCGCTGAGCGAAAG 937191
>seq1
Length=6530789
Score = 105 bits (116), Expect = 1e-16
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712
|||||| | ||||||||||||||||| || | || |||||||| ||||||||| | |||
Sbjct 2636414 AACTACTTGGACATCAAGCCCCTCCTAGACGTTGGCTGCAAGACGGTGGCCAACATGATC 2636473
Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||| || || || || || ||||| || |||||||
Sbjct 2636474 AAGGGCAAGTCTCCTGAAGAGATTCGGAAGACTTTCAACATCA 2636516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916235124296534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |