Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3 132 9e-26 >seq3 Length=5051094 Score = 132 bits (146), Expect = 9e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | |||||| ||||| | || || || || || ||||| || || || || | Sbjct 3316088 TACCACCGCGCAAACGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 3316029 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||| || || ||||| ||||| || || || | || || || |||| Sbjct 3316028 AGAGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAG 3315969 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || || ||||| ||||| ||||||| || ||||| || ||||| || || | || Sbjct 3315968 GGATACCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGG-AGCTCTCA 3315910 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||| ||||||||||||||||| ||||| || || |||||||| Sbjct 3315909 ACCTCGAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAAATCTGCAT 3315860 Score = 132 bits (146), Expect = 9e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || ||||| |||||||| || ||| ||||| || || || || Sbjct 3316316 TACCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGC 3316257 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||||| || ||||| || ||||||||||| || | ||||| || |||| Sbjct 3316256 TCAAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAG 3316197 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||||||||| ||||| ||| || || || |||||||| || | || Sbjct 3316196 GGATGCCCTCCTTATCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCTGATGACTCG 3316138 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || ||||||||||| || | ||||| || || || ||||| Sbjct 3316137 ACTTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || || || || | | || Sbjct 3315846 CGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 3315787 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || |||||||||||||| | | || || || ||||| || || ||||| Sbjct 3315786 TCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTG 3315727 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || |||||||| | || ||||| || || |||||| || | || || || | ||| || Sbjct 3315726 TCCTGAATCTTCGACTTGACATTGTCGATGGTATCA-GAGCTCTCGACCTCGAGAGTGAT 3315668 Query 82775 CGTCTTGCCTGTCA 82788 |||||||| |||| Sbjct 3315667 GGTCTTGCCGGTCA 3315654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825866555934