Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 291 8e-74 seq3 140 3e-28 seq5 132 5e-26 seq7 116 4e-21 >seq6 Length=3061052 Score = 291 bits (322), Expect = 8e-74 Identities = 1120/1745 (64%), Gaps = 57/1745 (3%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTATCTTCATC 148118 ||||||||||| || ||||| ||||| ||||| | ||| | |||| | ||| Sbjct 2277335 TGGTCAATGAAAGCACCACGATCAGCAGCCATCTGCACAACTTGACGCTG---CGAGATC 2277279 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 |||||| | |||||||| || | |||||||| | | || || | ||| ||| | Sbjct 2277278 TCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATATTGGGAATGTTCTGAATA 2277219 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238 ||||| | |||| || |||| ||| | |||| | || | |||| | Sbjct 2277218 GAGCCATTCTCAGCAATGATGCGATTCTTCATGGCATCCGACCAGAGACCCATGTCGACC 2277159 Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 || || | || || || | || || ||||| ||||| || || | || || | | | Sbjct 2277158 AGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCACCAGCCAAGACACGTCTCTGG 2277099 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||| || | |||||||| | || |||||||| | ||| |||| ||| | Sbjct 2277098 TAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTG 2277039 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || ||||||||| |||||||||| |||||| | |||| | | || | | || | Sbjct 2277038 GCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCTTGACCT-GCTC 2276980 Query 148419 TTCAGAG-CCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477 | | || |||| ||||| || ||| || |||||||||||||||| ||||||| Sbjct 2276979 ACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTCACGTTCCACATGTCAAACTGCAG 2276920 Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||||| | ||| || |||| | | || ||| || || ||| | || || Sbjct 2276919 GATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAAGGGCCCTGCTCTTTGGCGAG 2276860 Query 148538 TT----CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 | || ||| | || || ||| ||| |||||| || || || ||| |||| Sbjct 2276859 CTCAACCGAAGC---CGTCAAG-GCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTT-- 2276806 Query 148594 GCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650 || | | | |||| | ||| | || | | ||| || || || || || | Sbjct 2276805 -CAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAAGAAAGCATCAGCGA 2276747 Query 148651 GGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGA 148710 | || || || |||||||||||||| ||||| |||||| | || || || || Sbjct 2276746 GACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTGTTTCGGGCCTCCTGGA 2276687 Query 148711 GCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTC 148770 || ||||||||| ||| ||||| |||| |||||||| || || |||| || | Sbjct 2276686 CGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGACCT 2276627 Query 148771 TGCGCAGCAATTCAAAATCGTA---------CTTGTCATCTACGATGCATCGGTTCACGG 148821 ||||| | |||||||| |||| || |||| | || | || | Sbjct 2276626 CATGCAGCTTCTGGAAATCGTAGCAGCCCTCGTTGTAGTCAACGAAGGATGG---CAGAG 2276570 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 | | ||| || || ||||| |||||| ||| || ||||||| |||||| | |||||||| Sbjct 2276569 CCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGG 2276510 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACG 148941 ||| || ||| | | ||| || | |||||| || |||||||||| |||||| Sbjct 2276509 TGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 2276450 Query 148942 CGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACC 148998 |||||||| |||||| | || || || || ||| | || | || | ||| Sbjct 2276449 GATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACC 2276390 Query 148999 GATGCAGGTCCTGCGCGCGCACTTGCTGCTC-----GTAGCGACCCTCCTGCTCGTATAA 149053 ||| | ||| || |||| || || | ||||||||| |||||| Sbjct 2276389 ---ACAGCTTCTGGGC-----CTTGATGGTCTTGCGGCCGCGACCCTCGCTCTCGTACTT 2276338 Query 149054 AGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGG 149113 ||||| ||| ||| ||||||||||||| ||| | ||||| ||||||| | || Sbjct 2276337 CTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGG 2276278 Query 149114 GCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCA 149173 |||||| || | ||| |||||| | | || |||||||| |||||||| || | ||| Sbjct 2276277 GCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCA 2276218 Query 149174 GAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTT 149233 ||| || | | || || || || || || ||| ||| |||| || Sbjct 2276217 GAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTC 2276158 Query 149234 GAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG 149293 ||| | ||||| ||| || ||||| ||||||| || | || | ||||| || Sbjct 2276157 GAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACG 2276098 Query 149294 C---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTC 149350 | ||||| |||||||| || | | || ||||||| || || |||| ||| || | Sbjct 2276097 CTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGAC 2276038 Query 149351 AATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 | || ||| || ||||| ||| | |||| || || || | ||| Sbjct 2276037 CAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTG 2275978 Query 149411 CACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCG 149469 ||||||| |||||| ||||| ||| | || ||||| |||||| ||| || Sbjct 2275977 GACGTTGAGGCCGATACCGCCAGCCAT-TTTGGAGATCATGGCGCAGGTCTTGAGGGTGT 2275919 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||||| || || |||||||| ||||||| | ||| ||||| ||| ||| || | Sbjct 2275918 CATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCTGGG 2275859 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTC 149588 | | || ||||| ||| | |||||| ||||| || || | || || | | Sbjct 2275858 ACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCG-AC 2275800 Query 149589 ATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACG 149648 || | | |||| ||| | ||||| || |||| || || |||||| | || || Sbjct 2275799 ATGAGGTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACA 2275740 Query 149649 CGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCG 149708 ||||| | ||| ||||| || ||||| | | ||| ||| ||||| | ||| | Sbjct 2275739 CGCATGATCATGTGCTGAGGACGCTCGACGATCTTGCCGTCAAGCTTGAGGAGGTACGAG 2275680 Query 149709 TTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 ||| | |||||| |||| ||||||| |||| ||||| ||| ||| | | |||||| Sbjct 2275679 CGTTCCAAAGTCTTGAAGCCGAAGTACTGATAGTTGAAGTCACGGTCGTAGACGATGGCG 2275620 Query 149769 GCGTC 149773 | ||| Sbjct 2275619 GAGTC 2275615 >seq3 Length=5051094 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || ||||| ||| | ||| |||||| ||||| Sbjct 3316063 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTG 3316004 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||||| ||| |||| || ||||||||||| |||||||| || |||||||| |||||| Sbjct 3316003 TTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTT 3315944 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||||| | || | |||||||| | ||| || |||| |||| || ||||| || Sbjct 3315943 TGACTTGACATTGTCGATCGTGTCGGAGCTCTCAACCTCGAGAGTGATCGTCTTGCCTGT 3315884 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||||||||||||| Sbjct 3315883 CAAGGTCTTGACGAAAATCTGCATG 3315859 Score = 104 bits (114), Expect = 2e-17 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 || ||||| || ||||| |||| || || || || |||||||| |||||||| || Sbjct 3316278 TCCTTCTGAATGTTGTAGTCGCTCAAGGTTCGGCCG--TCCTCGAGTTGCTTGCCAGCAA 3316221 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||| ||||| ||||||||||| ||||| || |||||| ||| | | Sbjct 3316220 AGATAAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGT 3316161 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| |||||| | | ||| || || | |||| || |||||||| || || || | Sbjct 3316160 TGTCAATCGTGTCTGATGACTCGACTTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGA 3316101 Query 133648 CGAAAATCTGCAT 133660 |||| || ||||| Sbjct 3316100 CGAAGATTTGCAT 3316088 Score = 102 bits (112), Expect = 8e-17 Identities = 336/520 (65%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || | || || ||||| || ||||| || ||||| ||| || ||||| | Sbjct 937642 CTGGTAATCAGCTACCCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 937583 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || ||| | ||||| ||||||| Sbjct 937582 CATGAAGTCGAAGGGGTTGGAGACCTTGTAGATCTTCTCATTGCCCAGAGCAACGAGCAA 937523 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 || ||||| || ||||||||||||| ||| | ||||||||| || | || Sbjct 937522 GCGATCCGCGACGAACTCAATGTACTGCTTCATCAGGGTAGAGTTCATGCCGAGAAGAGC 937463 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 ||||| ||| || || || |||| ||| || || || || ||| || | Sbjct 937462 GCAGGGCAATGCCTCAGTCAAGAATTCCTGCTCGATTGTGACGGCATCGGTGATAATCTC 937403 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC-GGT------AGTACAGGC 120643 | || || || | || | |||||| ||| ||| || ||||| Sbjct 937402 CTGAAT------GCGCTGCTTGCTGGGG-CGATGC---TTCAGGTGAGAGAAGAGCAGGC 937353 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | || ||||| ||||| ||||||||||| || || || ||||||||| || ||||| | Sbjct 937352 AGGCGAAGTCGGTGTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGAC 937293 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 ||||||| | ||| | |||||| |||| || | ||| || ||| || || | Sbjct 937292 CGGGCATCAGGCCACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGA 937233 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 ||||| || ||| ||||| |||| ||||| || || | | ||| | || Sbjct 937232 TACCCTCGACAGCGGCGAAGGCAACCAGGCGCTGAGCGAAAGAGGAGTCCTTATCCTGGA 937173 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 |||| |||||||| |||||||| ||||| | ||| || Sbjct 937172 TCCATCGGATGGCCCAATCGGCCTTCTTGCGAATGCAAGG 937133 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| || || ||| | ||||| |||||||| | Sbjct 3316513 GGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCA-TCCTCCAGCTGCTTAC 3316455 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || ||||| || |||||||| ||||| || Sbjct 3316454 CAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCT 3316395 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || ||| ||| || || || | ||| | ||||| || ||||| | Sbjct 3316394 TCACGTTATCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTTTTACCCGTCAGGG 3316335 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 3316334 TCTTGACGAAGATTTGCAT 3316316 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || ||| | | | || || |||||||| | Sbjct 3315829 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAGCTGCTTTC 3315771 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||| ||||| ||||| |||||||| ||||| || Sbjct 3315770 CAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACT 3315711 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | || || | | ||| || |||| |||| ||| |||||||||| Sbjct 3315710 TGACATTGTCGATGGTATCAGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTCA 3315654 >seq5 Length=3459663 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||| ||||| || ||||| ||| | ||| |||||||||| Sbjct 1049150 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGC 1049091 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || || |||||||||||||| |||||||| |||||||| |||| Sbjct 1049090 TGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATC 1049031 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||| | | |||||| || | ||||| ||| || || Sbjct 1049030 TTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCC 1048971 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || |||||||||||||| Sbjct 1048970 GTGAGGGTCTTGACGAAAATCTGCAT 1048945 >seq7 Length=2782040 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | || || ||||||||||| |||||||| || |||||| Sbjct 1279476 TCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTG 1279417 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| |||| ||||| | Sbjct 1279416 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATG 1279357 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 1279356 GTCTTGCCCGTCAGGGTCTTCACGAAA 1279330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420159467440