Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 152 7e-31 seq6 138 2e-26 >seq3 Length=5051094 Score = 152 bits (168), Expect = 7e-31 Identities = 240/336 (71%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||||||||| ||||| ||||||||||||||| |||| | Sbjct 936734 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATCGATC 936792 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| || || | ||| || ||| | ||| || Sbjct 936793 TCTCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGATGATGAGAAGTACTTCGTCT 936852 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||| || ||| ||||| ||| |||||||| || |||||||||| || Sbjct 936853 CTCACATCCTGGC-TTTCTTCGCTGCCTCGGATGGCATTGTCAATGAGAACCTGGTCGAG 936911 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | |||||||| | || ||||| |||| || ||||| ||||||||| Sbjct 936912 CGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 936971 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || |||||||| || || ||||| |||||| ||||||| | | Sbjct 936972 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGCAG 937031 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 | | ||||||| |||| || ||||||||||| Sbjct 937032 ACCCA-AAGGACCTACCTGTTCAATGCCATCGACAC 937066 Score = 96.9 bits (106), Expect = 5e-14 Identities = 183/264 (69%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || |||| ||| ||| |||||| |||||| | || || | | ||| | |||| Sbjct 937401 AGGAGATTATCACCGATGCCGTCACAATCGAGCAGGAATTCTTGACTGAGGCATTGCCCT 937460 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || ||||||||||| | ||| || ||| ||||||||||| || ||||| || Sbjct 937461 GCGCTCTTCTCGGCATGAACTCTACC-CTGATGAAGCAGTACATTGAGTTC-GTCGCGGA 937518 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||| |||||| || || ||| | ||||| |||| | ||||||| ||| | Sbjct 937519 TCGCTTGCTCGTTGCTCTGGGCAATG-AGAAGATCTACAAGGTCTCCAACCCCTTCGACT 937577 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756 |||||| ||||| || | |||||||||||||| |||||| || || || || | Sbjct 937578 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGGGTAGCTGATT 937637 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780 || ||||||||||||| |||| Sbjct 937638 ACCAGAAGGCCGGCGTCATGGCCA 937661 Score = 86.0 bits (94), Expect = 9e-11 Identities = 115/155 (74%), Gaps = 5/155 (3%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTT-GCCGAG 1456181 || |||||||| ||||| || |||||| | | ||| | || | |||| || || Sbjct 937145 AAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGAC-TC--CTCTTTCGCTCAG 937201 Query 1456182 CGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATC 1456240 || || || | ||| ||||| |||||||| ||||||||| ||| ||| | | ||| Sbjct 937202 CGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAATC 937261 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||||||||| ||||| ||||||||||| Sbjct 937262 TTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCT 937296 >seq6 Length=3061052 Score = 138 bits (152), Expect = 2e-26 Identities = 335/503 (67%), Gaps = 17/503 (3%) Strand=Plus/Plus Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740 ||||||||||| | ||| | |||||| | ||| ||| ||||| ||| |||||| Sbjct 2275599 GCACAAGGAGGAATTGGACTCCGCCATCGTCTACGACCGTGACTTCAACTATCAGTACTT 2275658 Query 259741 TGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800 || | ||| ||| || || ||||| ||| | || | |||||||||| Sbjct 2275659 CGGCTTCAAGACTTTGGAACGCTCGTACCTCCTCAAGCTTGACGGCAAGATCGTCGAGCG 2275718 Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860 || ||| | ||| |||||||||| || | ||| | |||| || ||||| Sbjct 2275719 TCCTCAGCACATGATCATGCGTGTTGCTGTCGGCA--TCTGGG------GA----GACAA 2275766 Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAG 259919 | |||| ||| | | || || | ||||||| |||| ||| |||||| | Sbjct 2275767 CA---TTGAGCGCGTCATTGAGACGTATAACCTCATGTCG-AGCAAGTTCTTCACCCACG 2275822 Query 259920 CGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGT 259979 | | ||||| ||||| |||||||| || || | | ||| || || ||||| ||| Sbjct 2275823 CTTCCCCCACACTCTTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGG 2275882 Query 259980 TGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCA 260039 | |||||||||| || || || || ||||||||||| |||||| ||||| | | Sbjct 2275883 TCGACATGAAGGATGACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGA 2275942 Query 260040 TCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCT 260099 ||||||| ||| ||||| ||||| | || ||| | || || | || ||| Sbjct 2275943 TCTCCAAAATGGCTGGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCT 2276002 Query 260100 ACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACG 260159 || | || || |||||||| |||||||| || || ||||||||||| || || ||| Sbjct 2276003 ACATTGCCGGTACCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACA 2276062 Query 260160 ACACGGCGCGCTACGTCGACCAG 260182 ||||||| | || || |||||| Sbjct 2276063 ACACGGCTAGATATGTTGACCAG 2276085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177800976105172