Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 7e-31
seq6 138 2e-26
>seq3
Length=5051094
Score = 152 bits (168), Expect = 7e-31
Identities = 240/336 (71%), Gaps = 7/336 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| ||||| ||||||||||||||| |||| |
Sbjct 936734 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATCGATC 936792
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | ||||| || || | ||| || ||| | ||| ||
Sbjct 936793 TCTCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGATGATGAGAAGTACTTCGTCT 936852
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||| || ||| ||||| ||| |||||||| || |||||||||| ||
Sbjct 936853 CTCACATCCTGGC-TTTCTTCGCTGCCTCGGATGGCATTGTCAATGAGAACCTGGTCGAG 936911
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | |||||||| | || ||||| |||| || ||||| |||||||||
Sbjct 936912 CGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 936971
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||||||||| || |||||||| || || ||||| |||||| ||||||| | |
Sbjct 936972 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGCAG 937031
Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106
| | ||||||| |||| || |||||||||||
Sbjct 937032 ACCCA-AAGGACCTACCTGTTCAATGCCATCGACAC 937066
Score = 96.9 bits (106), Expect = 5e-14
Identities = 183/264 (69%), Gaps = 4/264 (2%)
Strand=Plus/Plus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
|| |||| ||| ||| |||||| |||||| | || || | | ||| | ||||
Sbjct 937401 AGGAGATTATCACCGATGCCGTCACAATCGAGCAGGAATTCTTGACTGAGGCATTGCCCT 937460
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
|| || ||||||||||| | ||| || ||| ||||||||||| || ||||| ||
Sbjct 937461 GCGCTCTTCTCGGCATGAACTCTACC-CTGATGAAGCAGTACATTGAGTTC-GTCGCGGA 937518
Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697
||| |||||| || || ||| | ||||| |||| | ||||||| ||| |
Sbjct 937519 TCGCTTGCTCGTTGCTCTGGGCAATG-AGAAGATCTACAAGGTCTCCAACCCCTTCGACT 937577
Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756
|||||| ||||| || | |||||||||||||| |||||| || || || || |
Sbjct 937578 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGGGTAGCTGATT 937637
Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780
|| ||||||||||||| ||||
Sbjct 937638 ACCAGAAGGCCGGCGTCATGGCCA 937661
Score = 86.0 bits (94), Expect = 9e-11
Identities = 115/155 (74%), Gaps = 5/155 (3%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTT-GCCGAG 1456181
|| |||||||| ||||| || |||||| | | ||| | || | |||| || ||
Sbjct 937145 AAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGAC-TC--CTCTTTCGCTCAG 937201
Query 1456182 CGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATC 1456240
|| || || | ||| ||||| |||||||| ||||||||| ||| ||| | | |||
Sbjct 937202 CGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAATC 937261
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| |||||||||||||| ||||| |||||||||||
Sbjct 937262 TTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCT 937296
>seq6
Length=3061052
Score = 138 bits (152), Expect = 2e-26
Identities = 335/503 (67%), Gaps = 17/503 (3%)
Strand=Plus/Plus
Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740
||||||||||| | ||| | |||||| | ||| ||| ||||| ||| ||||||
Sbjct 2275599 GCACAAGGAGGAATTGGACTCCGCCATCGTCTACGACCGTGACTTCAACTATCAGTACTT 2275658
Query 259741 TGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800
|| | ||| ||| || || ||||| ||| | || | ||||||||||
Sbjct 2275659 CGGCTTCAAGACTTTGGAACGCTCGTACCTCCTCAAGCTTGACGGCAAGATCGTCGAGCG 2275718
Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860
|| ||| | ||| |||||||||| || | ||| | |||| || |||||
Sbjct 2275719 TCCTCAGCACATGATCATGCGTGTTGCTGTCGGCA--TCTGGG------GA----GACAA 2275766
Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAG 259919
| |||| ||| | | || || | ||||||| |||| ||| |||||| |
Sbjct 2275767 CA---TTGAGCGCGTCATTGAGACGTATAACCTCATGTCG-AGCAAGTTCTTCACCCACG 2275822
Query 259920 CGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGT 259979
| | ||||| ||||| |||||||| || || | | ||| || || ||||| |||
Sbjct 2275823 CTTCCCCCACACTCTTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGG 2275882
Query 259980 TGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCA 260039
| |||||||||| || || || || ||||||||||| |||||| ||||| | |
Sbjct 2275883 TCGACATGAAGGATGACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGA 2275942
Query 260040 TCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCT 260099
||||||| ||| ||||| ||||| | || ||| | || || | || |||
Sbjct 2275943 TCTCCAAAATGGCTGGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCT 2276002
Query 260100 ACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACG 260159
|| | || || |||||||| |||||||| || || ||||||||||| || || |||
Sbjct 2276003 ACATTGCCGGTACCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACA 2276062
Query 260160 ACACGGCGCGCTACGTCGACCAG 260182
||||||| | || || ||||||
Sbjct 2276063 ACACGGCTAGATATGTTGACCAG 2276085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177800976105172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |