Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 131 2e-25 seq3 129 6e-25 seq7 104 2e-17 >seq5 Length=3459663 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | ||| || ||||| ||||| || |||||||||||| | |||| | Sbjct 1049162 AGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 1049103 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| || || || || |||| |||||||| ||||| || ||||| || Sbjct 1049102 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 1049043 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || ||||| || || || Sbjct 1049042 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTG 1048983 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| ||||| || | || || |||||||| ||||| ||| Sbjct 1048982 ATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 1048941 >seq3 Length=5051094 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||||| ||||| || |||||||||||| | |||| | ||| || Sbjct 3316068 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 3316009 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||||||||| || ||||||| |||||||| || || || || || || || ||||| Sbjct 3316008 AGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGG 3315949 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| ||||| ||| | |||||||| || || |||||||| || || || Sbjct 3315948 ATCTTTGACTTGACATTGTCGATCGTGTCGGAGCTCTCAACCTCGAGAGTGATCGTCTTG 3315889 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || |||||||| ||||| Sbjct 3315888 CCTGTCAAGGTCTTGACGAAAATCTGCAT 3315860 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct 3315858 CCACCTCGGAGGCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3315799 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| |||||||||||||| || || || Sbjct 3315798 AGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGA 3315739 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | || || || || || Sbjct 3315738 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAGCTCTCGACC 3315679 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 |||||||| ||||| || ||||| Sbjct 3315678 TCGAGAGTGATGGTCTTGCCGGT 3315656 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||| |||||| |||||||||||||||| | ||| | ||| ||||| || Sbjct 3316291 GTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTCAAGGTTCGGCCGTCCTCGAGTTG 3316232 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| ||||| || | |||||| || || || || ||||| || || ||||| || || Sbjct 3316231 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCTTGGATCTT 3316172 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||| | ||||| || || || || || | || || || || ||||| Sbjct 3316171 GCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACTTCCAACGTGATCGTCTTGCCGGT 3316112 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| |||||||| Sbjct 3316111 AAGGGTCTTGACGAAGATTTGCAT 3316088 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||| ||||| |||||||||||||||| Sbjct 3316542 CCGCCACGGAGACGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 3316483 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || ||||| || || || || |||| ||||||||| || || || Sbjct 3316482 AAAGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 3316423 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || || || || | || ||| ||||| || Sbjct 3316422 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACC 3316363 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| |||||||| || | || || ||||| |||||||| Sbjct 3316362 TCCAAGGTAATAGTTTTACCCGTCAGGGTCTTGACGAAGATTTGCAT 3316316 >seq7 Length=2782040 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| ||||||||||||||| | ||| | || |||||||| ||||| ||||| | Sbjct 1279511 CCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1279452 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||| || || || || || || || || || || || ||||| || Sbjct 1279451 TCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1279392 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | |||||||| || ||||| ||||| || ||||| || || || | || || |||| Sbjct 1279391 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1279332 Query 134704 AA 134705 || Sbjct 1279331 AA 1279330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397730347120