Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 2e-25
seq3 129 6e-25
seq7 104 2e-17
>seq5
Length=3459663
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| | ||| || ||||| ||||| || |||||||||||| | |||| |
Sbjct 1049162 AGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 1049103
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || || || |||| |||||||| ||||| || ||||| ||
Sbjct 1049102 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 1049043
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | ||||| || || ||||| || || ||
Sbjct 1049042 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTG 1048983
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| ||||| || | || || |||||||| ||||| |||
Sbjct 1048982 ATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 1048941
>seq3
Length=5051094
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||||| ||||| || |||||||||||| | |||| | ||| ||
Sbjct 3316068 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 3316009
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||||||||| || ||||||| |||||||| || || || || || || || |||||
Sbjct 3316008 AGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGG 3315949
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| ||| ||||| ||| | |||||||| || || |||||||| || || ||
Sbjct 3315948 ATCTTTGACTTGACATTGTCGATCGTGTCGGAGCTCTCAACCTCGAGAGTGATCGTCTTG 3315889
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || |||||||| |||||
Sbjct 3315888 CCTGTCAAGGTCTTGACGAAAATCTGCAT 3315860
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | ||| ||||| || ||||| ||||| || ||||||||||||
Sbjct 3315858 CCACCTCGGAGGCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3315799
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| || || ||||| |||||||||||||| || || ||
Sbjct 3315798 AGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGA 3315739
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | || || || || ||
Sbjct 3315738 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAGCTCTCGACC 3315679
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|||||||| ||||| || |||||
Sbjct 3315678 TCGAGAGTGATGGTCTTGCCGGT 3315656
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||| |||||| |||||||||||||||| | ||| | ||| ||||| ||
Sbjct 3316291 GTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTCAAGGTTCGGCCGTCCTCGAGTTG 3316232
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| ||||| || | |||||| || || || || ||||| || || ||||| || ||
Sbjct 3316231 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCTTGGATCTT 3316172
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | ||||| || || || || || | || || || || |||||
Sbjct 3316171 GCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACTTCCAACGTGATCGTCTTGCCGGT 3316112
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| ||||||||
Sbjct 3316111 AAGGGTCTTGACGAAGATTTGCAT 3316088
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||| ||||| ||||||||||||||||
Sbjct 3316542 CCGCCACGGAGACGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 3316483
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || ||||| || || || || |||| ||||||||| || || ||
Sbjct 3316482 AAAGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 3316423
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || || || || | || ||| ||||| ||
Sbjct 3316422 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACC 3316363
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||| |||||||| || | || || ||||| ||||||||
Sbjct 3316362 TCCAAGGTAATAGTTTTACCCGTCAGGGTCTTGACGAAGATTTGCAT 3316316
>seq7
Length=2782040
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| ||||||||||||||| | ||| | || |||||||| ||||| ||||| |
Sbjct 1279511 CCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1279452
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||||||||| || || || || || || || || || || || ||||| ||
Sbjct 1279451 TCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1279392
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||||| || ||||| ||||| || ||||| || || || | || || ||||
Sbjct 1279391 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1279332
Query 134704 AA 134705
||
Sbjct 1279331 AA 1279330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397730347120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |