Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 3e-27
seq3 109 5e-19
>seq6
Length=3061052
Score = 136 bits (150), Expect = 3e-27
Identities = 418/637 (66%), Gaps = 21/637 (3%)
Strand=Plus/Minus
Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672
|||| ||||| || | ||| ||||||||| || || |||||||| |||| ||| || |
Sbjct 2276281 TGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGA 2276222
Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTT---TTTCTCTTCTGTACCCATAAtttttt 131729
||| | || | || ||||| | ||| || ||| | || || | || ||
Sbjct 2276221 TCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCT-TG---CCGTGGTTCTTA 2276166
Query 131730 t-CAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788
||| | | || || || | ||| |||||||| || || | ||| | || | |||
Sbjct 2276165 CGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCG 2276106
Query 131789 CCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845
|| ||||| || || || | ||||| | | || |||||||| | || || | |
Sbjct 2276105 CCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGC 2276046
Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905
||||| ||| |||||||| |||| ||||| | ||||||| ||| | || | |
Sbjct 2276045 ATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGG 2275986
Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGT 131964
|| ||| |||||||| || ||||| || ||| | ||| ||||| | ||||| | |
Sbjct 2275985 ATGCGGTGGACGTTGAGGCCGATACCGCCAGCCAT-TTTGGAGATCATGGCGCAGGTCTT 2275927
Query 131965 TAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGA 132024
|| |||| ||||||||| || | |||||| | |||||||| | |||||||||||
Sbjct 2275926 GAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGA 2275867
Query 132025 CAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTT 132084
|| ||| ||| || ||||| || | ||||||| ||||| || || | ||
Sbjct 2275866 CAGCTGGGACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTT 2275807
Query 132085 TTTGGCCATGCACCGATACGATTGTATAGCGGACTCGATATCG----CCCAGATGTATGG 132140
| | |||| ||||| | || || ||| || | | |||||||| |
Sbjct 2275806 GCTCGACATGAGGTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCAGATG--CCG 2275749
Query 132141 TCAATGCGACCCGCATGTACATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGATTTTGA 132200
|| || || |||||| |||||| ||| |||||| | | |||||||| | ||||
Sbjct 2275748 ACA--GCAACACGCATGATCATGTGCTGAGGACGCTCGACGATCTTGCCGTCAAGCTTGA 2275691
Query 132201 TCAAATAACCGTTTTCCAAAGTTTTGAAACCAAAATA 132237
| || | ||||||||| ||||| || || ||
Sbjct 2275690 GGAGGTACGAGCGTTCCAAAGTCTTGAAGCCGAAGTA 2275654
>seq3
Length=5051094
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || ||||| || | ||||| || | || || || ||||| ||||||||||||
Sbjct 3316314 CCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTC 3316255
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || |||| ||||| || || || || | || ||||||||||| || || ||
Sbjct 3316254 AAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGG 3316195
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| ||||| ||||||| | |||| | | || | ||||||| | || |||
Sbjct 3316194 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACT 3316135
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | || || | ||||| || || || || || ||||||||||||
Sbjct 3316134 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCATA 3316087
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || ||||| ||||||||||||| | || | || || ||||| ||||| ||| |
Sbjct 3316506 TCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCCTCCAGCTGCTTACCAGCGAAG 3316447
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
|| |||||||| || || || || | |||||| || || |||||| | |||| | |
Sbjct 3316446 ATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTA 3316387
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | || || ||| ||| || || | || |||| ||| |||||||| || || ||
Sbjct 3316386 TCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTTTTACCCGTCAGGGTCTTGACG 3316327
Query 27237 AAGATTTGCATA 27248
||||||||||||
Sbjct 3316326 AAGATTTGCATA 3316315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933851037872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |