Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq6 280 2e-70
seq3 86.0 8e-12
seq10 82.4 1e-10
>seq6
Length=3061052
Score = 280 bits (310), Expect = 2e-70
Identities = 1020/1579 (65%), Gaps = 37/1579 (2%)
Strand=Plus/Minus
Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584
|| ||||| || || |||||| ||||||||||| | ||||||| | || |||||
Sbjct 2277281 ATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCAGGGATATTGGGAATGTTCTGA 2277222
Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644
|| || || | | | ||| ||| |||||| | | ||||||||||| || |
Sbjct 2277221 ATAGAGCCATTCTCAGCAATGATGCGATTCTTCATGGCATCCGACCAGAGACCCATGTCG 2277162
Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704
|| || |||| | | |||||| | |||||||| || | | | ||||
Sbjct 2277161 ACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAACTCACCAGCCAAGACACGTCTC 2277102
Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764
|||| ||||| | ||||| ||||||||||||||||| || || | ||||| | |||
Sbjct 2277101 TGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTA 2277042
Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824
|||||| ||||| || || | || | ||||| || | ||| | |||||||| |
Sbjct 2277041 CTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCTTGACCTGC 2276982
Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTCAAACT 110882
|| || | ||||| || | || | ||| ||||| |||| ||||||||||||
Sbjct 2276981 TCACGAAGGTCCTCCCACTCCCACA-GATCCGATGGCTTCACGTTCC-ACATGTCAAACT 2276924
Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942
| || | || | ||| || ||||| |||| || | || || | || || ||| |
Sbjct 2276923 GCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAAGGGCCCTGCTCTTTGG 2276864
Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
| | ||| ||| || || ||||| || |||||||||||||| | ||||
Sbjct 2276863 CGAGCTCAACCGAAGCCGTCAAGGCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTTCA 2276804
Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAG 111060
||| || || ||| || || | | || || || ||| |||| |||||
Sbjct 2276803 ACTCACGAGCCTCGGGTGACTCGAAGGGG-AGTCTCAGGGCCAAGAAAG-CATCAGCGAG 2276746
Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120
|||||||||||||| ||||| |||| ||| ||||| || ||||| || || ||
Sbjct 2276745 ACCTTGAACACCCACGCCAATGGGTCGGTGACGCATGTTGCTGTTTCGGGCCTCCTGGAC 2276686
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
||| || || |||||||| | ||| ||||| | || | || |||| ||
Sbjct 2276685 GGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGACCTC 2276626
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACAT---ACTTTGGAAGGGC 111237
||| || || | |||| | || ||| | | | || | ||| || ||
Sbjct 2276625 ATGCAGCTTCTGGAAATCGTAGCAGCC---CTCGTTGTAGTCAACGAAGGATGGCAGAGC 2276569
Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297
| || |||| |||||||| ||| ||| || | |||||| | || || ||
Sbjct 2276568 CAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGT 2276509
Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357
|| | ||||||||| || || || | ||||| ||||| ||||| ||||||
Sbjct 2276508 GCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTG 2276449
Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|||||||||||||||| |||| | || ||||| ||||| | | |||||||| | |||
Sbjct 2276448 ATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCA 2276389
Query 111418 -AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTTGTGT 111473
| | || | | || | |||| || |||| || ||||| ||||||||| |
Sbjct 2276388 CAGCTTCTGGGCCTTG----ATGGTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCAT 2276333
Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533
| | ||| ||||||||||| || ||||| |||||||| || | || || |
Sbjct 2276332 ACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACCTGGGCACTCATTGGGGCACA 2276273
Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593
|| | ||| | || | ||| || ||||||||||| || ||||| ||||| ||||
Sbjct 2276272 TCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGG 2276213
Query 111594 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 111653
| || ||||| | | ||| | || || | || ||||| || || || ||||
Sbjct 2276212 CCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGAGGA 2276153
Query 111654 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 111712
|||| | | || || ||||||||||||||||||| || | | || |||||
Sbjct 2276152 ACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCC---AGGACGCT 2276096
Query 111713 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
||| | || | ||||| | || ||| ||| || || |||||||| || | |
Sbjct 2276095 TGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCA 2276036
Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 111827
||| | ||| || || || || ||| || | | || | | ||||
Sbjct 2276035 GACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGA 2275976
Query 111828 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 111887
|| | || ||||| |||||| || ||||| || || | | || || |||
Sbjct 2275975 CGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCAT 2275916
Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947
||||||| | || ||| ||||| || ||| ||||||||| ||||| ||| || |
Sbjct 2275915 AGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCTG-GGAC 2275857
Query 111948 T-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACA 112004
| || ||||| ||||||||||| || || | ||||| ||| | | |||| ||||
Sbjct 2275856 TGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGA--AGAACTTGCTCGACA 2275799
Query 112005 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCC 112064
| || || ||||| | ||| ||||||| || || |||||||| || || |
Sbjct 2275798 TGAGGTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACAC 2275739
Query 112065 GCATGAACATGTACTGTGG 112083
|||||| ||||| ||| ||
Sbjct 2275738 GCATGATCATGTGCTGAGG 2275720
>seq3
Length=5051094
Score = 86.0 bits (94), Expect = 8e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
|||||| ||||| || || || || || || || |||||| ||||| ||||| || ||
Sbjct 937339 GTGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCC 937280
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||| | ||| | || | | ||||| ||| ||| ||||||||||| |||
Sbjct 937279 ACGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGC 937220
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTG 122848
|| || |||| ||||| | ||||| ||| ||| ||| | | | |||| || |
Sbjct 937219 GGCGAAGGCAACCAGGCGCTGAGCGAAAGAG-GAGTCCTTATCCTGGATCCATCGGATGG 937161
Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGT 122882
|||| | |||||||| ||| || || || ||
Sbjct 937160 CCCAATCGGCCTTCTTGCGAATGCAAGGGACTGT 937127
>seq10
Length=2523473
Score = 82.4 bits (90), Expect = 1e-10
Identities = 155/227 (68%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 181821 AGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAG 181880
|| |||| ||| || | ||| | ||||||||| ||| | |||||| ||||| | ||
Sbjct 21091 AGTCGCGAACCGAAGTTACCGCTTGGCTCAAGGCAGTTGACGTTGTTGGAACCGACAAAG 21150
Query 181881 TCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGAC 181940
| | ||||| || |||||| | ||| || || |||||||||||||| || |
Sbjct 21151 TTCTGCGCCAAACCAATGATGGTCTGTTGAAGCGAAACCTCACCGTGGTGGTAGGCAGTG 21210
Query 181941 TTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTG---AGGTTCTTG 181997
| | | ||| ||| | | ||| | || |||||| | ||| ||| | |||| |
Sbjct 21211 TGGCCACCAATGTATCCAGACAATTCGGCAACCTTC---TGATCCTTGACCAAGTTCCTC 21267
Query 181998 TGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044
| |||||| ||||||| || || || || |||||| ||||||||
Sbjct 21268 TTGAAGCAGCCATACATGACCTTTCTTTGACCAGGCTTCAGACCATC 21314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031167857600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |