Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6 259 6e-64 seq3 107 2e-18 >seq6 Length=3061052 Score = 259 bits (286), Expect = 6e-64 Identities = 1076/1686 (64%), Gaps = 35/1686 (2%) Strand=Plus/Minus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857 |||| | |||| ||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct 2277482 TCAACGGTGAATTGAATGGGTGCCGCAGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 2277423 Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917 ||||| || |||||||| || | ||||| || | ||| | ||| ||| Sbjct 2277422 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTACCCATGGTAGGATCC 2277363 Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977 | |||| | ||| | ||| ||||| || ||||| || ||||| || ||||| Sbjct 2277362 TTCATGTGAATGTTGAGGGATTGAGATTGGTCAATGAAAGCACCACGATCAGCAGCCATC 2277303 Query 117978 TCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037 | | || | | | ||| ||||| || ||| ||||||| |||| |||||| | Sbjct 2277302 TGCACAACTTGACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGACTCTTGATATCAGCA 2277243 Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCC 118097 ||||||| || || || || || ||| | | | ||| ||| |||||| | Sbjct 2277242 GGGATATTGGGAATGTTCTGAATAGAGCCATTCTCAGCAATGATGCGATTCTTCATGGCA 2277183 Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 118157 | ||||||||||| || | ||||||| | | | ||||| || ||| Sbjct 2277182 TCCGACCAGAGACCCATGTCGACCAGATCCTTGAGCAACCACGGGTTGACGACCTGGAAC 2277123 Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217 ||||| || | | |||||| | || || |||| ||||| || |||||||| |||||| Sbjct 2277122 TCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTCAAAGCATTCATTG 2277063 Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 || || | ||||| | || ||||||||||||||| || | || | |||||| ||| Sbjct 2277062 TTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGTTGCGG 2277003 Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 118337 | ||| | ||| | | | || || | ||||| || | | || || | Sbjct 2277002 ATACCGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGATGGCTTC 2276943 Query 118338 CCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCA 118397 | | |||||| |||||||| ||||| || | ||| || || ||||||| |||| ||| Sbjct 2276942 ACGTTCCACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGAATGACTCG 2276883 Query 118398 TATGGGCCCTCAACCTCCGCCA----ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 || ||||||| | | || | | || ||| || | | ||| ||||| || || Sbjct 2276882 TAAGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGC-CGTC---AAGGCGGCGTGGTAAAT 2276827 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC---G 118510 |||||||| || | |||| | |||||| || || || | ||||| | Sbjct 2276826 GGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTCTCAG 2276767 Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570 | ||| || |||| ||||||||||| ||||| | |||||| || || || | ||| Sbjct 2276766 GGCCAA---GAAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCAT 2276710 Query 118571 ATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 || || || || || ||||| || || || || | | || ||||| Sbjct 2276709 GTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGATT 2276650 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690 | ||| |||| |||| ||||| ||||| | | |||| | | || ||| | Sbjct 2276649 GCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGC---CCTCGTT 2276593 Query 118691 ATTGACATACTTAGGA----AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 118746 | | || || |||| || || | || ||||| || || || | ||| || Sbjct 2276592 GTAGTCA-ACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAG 2276534 Query 118747 TATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCT 118806 | |||||| || || || ||||| | ||| ||||| || || || | ||||| Sbjct 2276533 GGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAACTTCGGATTGTTCCGAGGTTCT 2276474 Query 118807 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 118866 | || || ||| ||| || ||||||||| |||||| | || | || ||||| | Sbjct 2276473 TCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAG 2276414 Query 118867 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC 118925 | |||| || |||||||| | ||| | | || | || | | || | | | || Sbjct 2276413 TCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTG-ATGGTCTTGCGGCCGCGA 2276355 Query 118926 CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 118985 ||||| ||||||||| || | ||| |||||||| || || | || | || Sbjct 2276354 CCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGA 2276295 Query 118986 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 ||||| || || ||||| | || | ||| | || || ||| || ||||||||| Sbjct 2276294 CCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 2276235 Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105 || || |||||||||||||| ||| |||| ||||| ||| ||| |||| || | || Sbjct 2276234 AACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCG 2276175 Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 119165 || || |||||| || | || || | | || || ||||| || || || || | Sbjct 2276174 TGGTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATG 2276115 Query 119166 GCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219 || | | || | |||| ||| |||||| ||||| || || ||| ||| Sbjct 2276114 GCAAAGGCGCC---AGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTG 2276058 Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGAC 119279 || || |||||||| || | | ||| | |||| || || || || ||| || Sbjct 2276057 AAGACCCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAA 2275998 Query 119280 TTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 119339 | | || | || ||||| || | || ||||| || ||| || ||||| Sbjct 2275997 CCAGTAGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATG 2275938 Query 119340 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 119399 ||||| | |||| || | ||||| ||||| || |||| |||| | ||| ||| Sbjct 2275937 GCGCAGGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGG 2275878 Query 119400 AAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 ||||| |||| || || ||| || ||||| || |||||||| || || | ||||| Sbjct 2275877 AAGCAAGAGGACAGCTG-GGACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTG 2275819 Query 119459 GATGAA 119464 | |||| Sbjct 2275818 GGTGAA 2275813 >seq3 Length=5051094 Score = 107 bits (118), Expect = 2e-18 Identities = 296/450 (66%), Gaps = 18/450 (4%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 |||||||||||||||||||| ||||| || ||| | ||| |||||||| || || || Sbjct 937629 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAG 937570 Query 129797 GGGTT------CTTTGAGTTC--CAAATTGCTGGCACTCCAATCTGTTTGAGGAGACGAT 129848 ||||| ||| || || | ||||| || ||| ||| | |||| Sbjct 937569 GGGTTGGAGACCTTGTAGATCTTCTCATTGCC--CAGAGCAAC------GAGCAAGCGAT 937518 Query 129849 CCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATG 129908 ||| |||| |||||||||||| |||| |||||||| |||| || || | Sbjct 937517 CCGCGACGAACTCAATGTACTGCTTCATCAGGGTAGAGTTCATGCCGAGAAGAGCGCAGG 937458 Query 129909 GGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAA 129968 | | || || | ||| ||| ||| || || || || | || | |||| Sbjct 937457 GCAATGCCTCAGTCAAGAATTCCTGCTCGATTGTGACGGCATCGGTGATAATCTCCTGAA 937398 Query 129969 TGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCTGG 130027 || || | ||| || | || || | || |||||| ||| || || | Sbjct 937397 TGCGCTGCTTGCTGGGGCGAT-GCTTCAGGTGAGAGAAGAGCAGGCAGGCGAAGTCGGTG 937339 Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 ||||| ||||||||||| |||||||| || || |||||| |||||| ||||| || || Sbjct 937338 TGGAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCCA 937279 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 |||||||| | |||||| || | |||| ||| ||| ||||| ||||| ||| Sbjct 937278 CGCTTCTTGAGCCAGAAGATTGAGGCGAATGCGCCGCTGAAAAAGATACCCTCGACAGCG 937219 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAG 130177 ||||| |||| || |||| ||| || ||| Sbjct 937218 GCGAAGGCAACCAGGCGCTGAGCGAAAGAG 937189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434380573360