Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 3e-54
seq3 113 5e-20
seq10 96.9 4e-15
seq9 93.3 5e-14
>seq6
Length=3061052
Score = 226 bits (250), Expect = 3e-54
Identities = 1127/1775 (63%), Gaps = 41/1775 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| || || |||| || || || ||||||| |||
Sbjct 2275720 CCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTC 2275779
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| ||||| || || ||||| |||| | | ||| ||||| | || || ||||
Sbjct 2275780 ATTGAGACGTATAACCTCATGTCGAGCAAGTTCT--TCACCCACGCTTCCCCCACACTCT 2275837
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
||||||| ||||| || |||| ||||| ||||||||| ||| || ||||| |
Sbjct 2275838 TCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGATG 2275897
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | |||||||||| || || | | || || ||||| || |||||
Sbjct 2275898 ACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAATGGCTG 2275957
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| ||||| || | || |||| | | || | | || ||| || || |
Sbjct 2275958 GCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTACCA 2276017
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| || ||| | ||| | | || |||||||| || || ||| ||| || | ||||
Sbjct 2276018 ACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGATATG 2276077
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| | || | ||| ||||| || | | || ||||||||||||||||||
Sbjct 2276078 TTGACCAGGGTGGCAACAAGCGTCCT---GGCGCCTTTGCCATCTATCTTGAGCCATGGC 2276134
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
| || || | | |||||||| || |||||| ||||| || | ||||| | | ||
Sbjct 2276135 ATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTC-GT 2276193
Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
|| || ||||| |||| || |||||||| |||||||| ||||||||| | || ||| ||
Sbjct 2276194 GCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAG 2276253
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| ||| | ||| | || | || || | || || ||||| |||| | ||
Sbjct 2276254 AACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGGC 2276313
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGG 104870
||||||||||| ||| | || ||||||||| || |||| ||| | || |||
Sbjct 2276314 GAGGAGTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTC--GCGGCCGCAAGACCA 2276371
Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| | || | || | ||||| | |||||||| || | || || ||||| |||| ||
Sbjct 2276372 T-CAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCC 2276430
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| |||||| ||||| || ||| |||| ||||| || || ||||| | || |||
Sbjct 2276431 TTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGAACAATC 2276490
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
|||||||| ||||| || || ||| | || | | | || ||| ||| ||
Sbjct 2276491 CGAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTT 2276550
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107
|| ||||| || || | ||||| || | || || | | | || | | | | |
Sbjct 2276551 TGCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGTTGA-CTACA-ACGAGGGCTGCTACG 2276608
Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167
||| | || || || || || || | ||| | || || |||| | | ||||
Sbjct 2276609 ATTTCCAGAAGCTGCATGAGGTCACTCAGGTCGTCGTCCGCAATCTCAACAAAATCATTG 2276668
Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
| || |||||||| || || || || || ||| | ||||| || ||||
Sbjct 2276669 ACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACCGACCCATTG 2276728
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTC----GCCACGCATTTGAT 105283
| | |||||||| |||||||| |||| | ||||| | | | | | | || ||
Sbjct 2276729 GCGTGGGTGTTCAAGGTCTCGCTGATG----CTTTCTTGGCCCTGAGACTCCCCTTCGAG 2276784
Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343
|| ||| || || | || || || ||||| ||||| || |||||||| |||
Sbjct 2276785 TCACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCGC-CTT 2276843
Query 105344 GAGGCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
|| || ||| ||| | || | | | || || || || | || |||| |||
Sbjct 2276844 GA--CGGCTTCGGTTGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAGGGATCT 2276901
Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTA 105459
|| ||||| | || | || || ||||| |||| |||| |||| ||| | || |
Sbjct 2276902 CCTGCTTCCGAGGGCATCCTGCAGTTTGACATGT-GGAACGTGAAGCCATCGGATCTGTG 2276960
Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519
|| ||||| | || || | |||||||| | ||| | || ||||| | || |
Sbjct 2276961 GGAGTGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTGCTGGT 2277020
Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579
||||| ||||| |||||| ||| | ||||| | || || |||||||||||||||||
Sbjct 2277021 AGCTCCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTTGAACC 2277080
Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 105639
||||| | ||||| || | |||| | | | || || ||||| | | ||||||
Sbjct 2277081 TTACACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGTCAACCC 2277140
Query 105640 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 105699
| | | | || || || || ||||||||||| | | |||||| ||| |||
Sbjct 2277141 GTGGTTGCTCAAGGATCTGGTCGACATGGGTCTCTGGTCGGATGCCATGAAGAATCGCAT 2277200
Query 105700 GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTT 105759
| | | ||| || ||||| || ||| |||| || ||| || |||| |
Sbjct 2277201 CATTGCTGAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCTGATATCAAGAGTCT 2277260
Query 105760 GTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGG 105819
||| || || ||||| ||| | | | || | | ||||| || ||||||||
Sbjct 2277261 CTACAAGACCGTCTGGGAGATCTCGCAGCGTCAAGTTGTGCAGATGGCTGCTGATCGTGG 2277320
Query 105820 TCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879
| |||||||| ||| |||| | || | |||| | ||| || ||| ||
Sbjct 2277321 TGCTTTCATTGACCAATCTCAATCCCTCAACATTCACATGAAGGATCCTACCATGGGTAA 2277380
Query 105880 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 105939
| || | |||||| | | |||||| |||||||| || || ||||| |||||
Sbjct 2277381 GATCACCAGCATGCACTTCACTGGCTGGAAGCTTGGTCTCAAGACCGGCATGTACTACCT 2277440
Query 105940 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974
|| || |||| ||| || ||||| ||||
Sbjct 2277441 GCGTACTCAGGCCGCTGCGGCACCCATTCAATTCA 2277475
>seq3
Length=5051094
Score = 113 bits (124), Expect = 5e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTC 94790
||||| || || |||| ||||| || |||||||| || ||| | | | || | |
Sbjct 937127 ACAGTCCCTTGCATTCGCAAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGAC 937186
Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
| | | || ||| |||| || | || || || ||| ||||||||||| ||| ||
Sbjct 937187 TCCT-CTTTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGG 937245
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
| ||| | | || | |||||||||||||| || || ||||| ||||| ||||||
Sbjct 937246 CGCATTCGCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTC 937305
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
||||||||| ||||||||||||||||| ||||||
Sbjct 937306 CAACGAGCTCATCTCTCGTGACGAGGGCCTCCAC 937339
>seq10
Length=2523473
Score = 96.9 bits (106), Expect = 4e-15
Identities = 227/335 (68%), Gaps = 12/335 (4%)
Strand=Plus/Plus
Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228
||||||||||||||| |||||||| ||| ||| |||||||||||||| | || ||
Sbjct 21805 AGACCCTTGATGTGGCTACCGTCGTAATCCTGATCGGTCATGATCATGAGGTGGCCGTAG 21864
Query 169229 CGAAG-CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286
|| || ||| | ||| ||| ||| |||| || || | ||||| |||||
Sbjct 21865 CGGAGGCTCTTAGT-ATCGGTGTAGACCTGCTTGTGTTTGAGGCCTAGGATCTGCTTGAT 21923
Query 169287 GATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTAC 169346
| || | || || |||||| || | || | ||| ||||| || |||||
Sbjct 21924 GCTC-TGGATTTCCTGGTTTTTGGTAATTTGGTCAAGAGAAGCATCTCGCACATTGAGCA 21982
Query 169347 ACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGA 169406
||| || ||||| |||||||||||| | ||||| | ||| | || | | || | ||
Sbjct 21983 TCTTTCCTCGAAGCGGGAAGACACCGATGCGATCAGGGTCAAGAATGGCGCGCCCAGAGA 22042
Query 169407 CTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA---TTTTCCA-GAT 169462
| || | ||| || |||||||||||||||| || |||||||| | |||| | |
Sbjct 22043 CAGCCAACCCCTTGGCGGAGTCACCCTCGGTGAGAATCAGCGTACAATCGTGTCCACGCT 22102
Query 169463 TGTGCCGTACCCGCCTTGTTCGCATCATCCAATTT 169497
|| ||||| ||| ||| || || |||||||
Sbjct 22103 TG----GTACCTGCCCAGTTGGCCTCCACCAATTT 22133
>seq9
Length=2573079
Score = 93.3 bits (102), Expect = 5e-14
Identities = 158/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||| || ||||| |||||||||| |||||| || ||| | |||| | | | || |
Sbjct 143751 GGCGTCGATCTCGTCAATGAAGATGATGCAGGGCGCATTCTTGCGACCCTCGGCGAACAA 143810
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 9820
|| ||||| || || ||| || ||||||||||||||||| || | | | | ||
Sbjct 143811 GTCTCGTACTCGGGAGGGGCCAACGCCAACAAACATCTCCACGAACTCCGATCCACTGAC 143870
Query 9821 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880
| || ||| || ||| ||||| || || | || |||||| |||||||||||
Sbjct 143871 GCT--GAAGAAAGGCACACCGGATTCTCCGGCGGTAGCCTTGGCGAGGAGAGTCTTACCA 143928
Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|| || || || || |||| |||||||| ||||||||||| ||
Sbjct 143929 GTTCCCGGGGGCCCAGCAAGGATAGCACCTCGAGGAATCTTGGCTCC 143975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260027179440
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