Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6 226 3e-54 seq3 113 5e-20 seq10 96.9 4e-15 seq9 93.3 5e-14 >seq6 Length=3061052 Score = 226 bits (250), Expect = 3e-54 Identities = 1127/1775 (63%), Gaps = 41/1775 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || |||| || || || ||||||| ||| Sbjct 2275720 CCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTC 2275779 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||| || || ||||| |||| | | ||| ||||| | || || |||| Sbjct 2275780 ATTGAGACGTATAACCTCATGTCGAGCAAGTTCT--TCACCCACGCTTCCCCCACACTCT 2275837 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||| ||||| || |||| ||||| ||||||||| ||| || ||||| | Sbjct 2275838 TCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGATG 2275897 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||||| || || | | || || ||||| || ||||| Sbjct 2275898 ACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAATGGCTG 2275957 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | ||||| || | || |||| | | || | | || ||| || || | Sbjct 2275958 GCGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTACCA 2276017 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || ||| | ||| | | || |||||||| || || ||| ||| || | |||| Sbjct 2276018 ACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGATATG 2276077 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| ||||| || | | || |||||||||||||||||| Sbjct 2276078 TTGACCAGGGTGGCAACAAGCGTCCT---GGCGCCTTTGCCATCTATCTTGAGCCATGGC 2276134 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 | || || | | |||||||| || |||||| ||||| || | ||||| | | || Sbjct 2276135 ATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTC-GT 2276193 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || || ||||| |||| || |||||||| |||||||| ||||||||| | || ||| || Sbjct 2276194 GCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAG 2276253 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| | || | || || | || || ||||| |||| | || Sbjct 2276254 AACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGGC 2276313 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGG 104870 ||||||||||| ||| | || ||||||||| || |||| ||| | || ||| Sbjct 2276314 GAGGAGTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTC--GCGGCCGCAAGACCA 2276371 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | || | || | ||||| | |||||||| || | || || ||||| |||| || Sbjct 2276372 T-CAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCC 2276430 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| || ||| |||| ||||| || || ||||| | || ||| Sbjct 2276431 TTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGAACAATC 2276490 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 |||||||| ||||| || || ||| | || | | | || ||| ||| || Sbjct 2276491 CGAAGTTCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTT 2276550 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107 || ||||| || || | ||||| || | || || | | | || | | | | | Sbjct 2276551 TGCAACCTGGCTTCTCTGGCTCTGCCATCCTTCGTTGA-CTACA-ACGAGGGCTGCTACG 2276608 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| | || || || || || || | ||| | || || |||| | | |||| Sbjct 2276609 ATTTCCAGAAGCTGCATGAGGTCACTCAGGTCGTCGTCCGCAATCTCAACAAAATCATTG 2276668 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || |||||||| || || || || || ||| | ||||| || |||| Sbjct 2276669 ACGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACCGACCCATTG 2276728 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTC----GCCACGCATTTGAT 105283 | | |||||||| |||||||| |||| | ||||| | | | | | | || || Sbjct 2276729 GCGTGGGTGTTCAAGGTCTCGCTGATG----CTTTCTTGGCCCTGAGACTCCCCTTCGAG 2276784 Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343 || ||| || || | || || || ||||| ||||| || |||||||| ||| Sbjct 2276785 TCACCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCGC-CTT 2276843 Query 105344 GAGGCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || || ||| ||| | || | | | || || || || | || |||| ||| Sbjct 2276844 GA--CGGCTTCGGTTGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAGGGATCT 2276901 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTA 105459 || ||||| | || | || || ||||| |||| |||| |||| ||| | || | Sbjct 2276902 CCTGCTTCCGAGGGCATCCTGCAGTTTGACATGT-GGAACGTGAAGCCATCGGATCTGTG 2276960 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 || ||||| | || || | |||||||| | ||| | || ||||| | || | Sbjct 2276961 GGAGTGGGAGGACCTTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTGCTGGT 2277020 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||||| ||||| |||||| ||| | ||||| | || || ||||||||||||||||| Sbjct 2277021 AGCTCCCATGCCCACAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTTGAACC 2277080 Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 105639 ||||| | ||||| || | |||| | | | || || ||||| | | |||||| Sbjct 2277081 TTACACTTCCAACATTTACCAGAGACGTGTCTTGGCTGGTGAGTTCCAGGTCGTCAACCC 2277140 Query 105640 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 105699 | | | | || || || || ||||||||||| | | |||||| ||| ||| Sbjct 2277141 GTGGTTGCTCAAGGATCTGGTCGACATGGGTCTCTGGTCGGATGCCATGAAGAATCGCAT 2277200 Query 105700 GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTT 105759 | | | ||| || ||||| || ||| |||| || ||| || |||| | Sbjct 2277201 CATTGCTGAGAATGGCTCTATTCAGAACATTCCCAATATCCCTGCTGATATCAAGAGTCT 2277260 Query 105760 GTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGG 105819 ||| || || ||||| ||| | | | || | | ||||| || |||||||| Sbjct 2277261 CTACAAGACCGTCTGGGAGATCTCGCAGCGTCAAGTTGTGCAGATGGCTGCTGATCGTGG 2277320 Query 105820 TCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879 | |||||||| ||| |||| | || | |||| | ||| || ||| || Sbjct 2277321 TGCTTTCATTGACCAATCTCAATCCCTCAACATTCACATGAAGGATCCTACCATGGGTAA 2277380 Query 105880 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 105939 | || | |||||| | | |||||| |||||||| || || ||||| ||||| Sbjct 2277381 GATCACCAGCATGCACTTCACTGGCTGGAAGCTTGGTCTCAAGACCGGCATGTACTACCT 2277440 Query 105940 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 || || |||| ||| || ||||| |||| Sbjct 2277441 GCGTACTCAGGCCGCTGCGGCACCCATTCAATTCA 2277475 >seq3 Length=5051094 Score = 113 bits (124), Expect = 5e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTC 94790 ||||| || || |||| ||||| || |||||||| || ||| | | | || | | Sbjct 937127 ACAGTCCCTTGCATTCGCAAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGAC 937186 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | | || ||| |||| || | || || || ||| ||||||||||| ||| || Sbjct 937187 TCCT-CTTTCGCTCAGCGCCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGG 937245 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 | ||| | | || | |||||||||||||| || || ||||| ||||| |||||| Sbjct 937246 CGCATTCGCCTCAATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTC 937305 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||||| ||||||||||||||||| |||||| Sbjct 937306 CAACGAGCTCATCTCTCGTGACGAGGGCCTCCAC 937339 >seq10 Length=2523473 Score = 96.9 bits (106), Expect = 4e-15 Identities = 227/335 (68%), Gaps = 12/335 (4%) Strand=Plus/Plus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 ||||||||||||||| |||||||| ||| ||| |||||||||||||| | || || Sbjct 21805 AGACCCTTGATGTGGCTACCGTCGTAATCCTGATCGGTCATGATCATGAGGTGGCCGTAG 21864 Query 169229 CGAAG-CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286 || || ||| | ||| ||| ||| |||| || || | ||||| ||||| Sbjct 21865 CGGAGGCTCTTAGT-ATCGGTGTAGACCTGCTTGTGTTTGAGGCCTAGGATCTGCTTGAT 21923 Query 169287 GATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTAC 169346 | || | || || |||||| || | || | ||| ||||| || ||||| Sbjct 21924 GCTC-TGGATTTCCTGGTTTTTGGTAATTTGGTCAAGAGAAGCATCTCGCACATTGAGCA 21982 Query 169347 ACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGA 169406 ||| || ||||| |||||||||||| | ||||| | ||| | || | | || | || Sbjct 21983 TCTTTCCTCGAAGCGGGAAGACACCGATGCGATCAGGGTCAAGAATGGCGCGCCCAGAGA 22042 Query 169407 CTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA---TTTTCCA-GAT 169462 | || | ||| || |||||||||||||||| || |||||||| | |||| | | Sbjct 22043 CAGCCAACCCCTTGGCGGAGTCACCCTCGGTGAGAATCAGCGTACAATCGTGTCCACGCT 22102 Query 169463 TGTGCCGTACCCGCCTTGTTCGCATCATCCAATTT 169497 || ||||| ||| ||| || || ||||||| Sbjct 22103 TG----GTACCTGCCCAGTTGGCCTCCACCAATTT 22133 >seq9 Length=2573079 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || ||||| |||||||||| |||||| || ||| | |||| | | | || | Sbjct 143751 GGCGTCGATCTCGTCAATGAAGATGATGCAGGGCGCATTCTTGCGACCCTCGGCGAACAA 143810 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 9820 || ||||| || || ||| || ||||||||||||||||| || | | | | || Sbjct 143811 GTCTCGTACTCGGGAGGGGCCAACGCCAACAAACATCTCCACGAACTCCGATCCACTGAC 143870 Query 9821 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880 | || ||| || ||| ||||| || || | || |||||| ||||||||||| Sbjct 143871 GCT--GAAGAAAGGCACACCGGATTCTCCGGCGGTAGCCTTGGCGAGGAGAGTCTTACCA 143928 Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 || || || || || |||| |||||||| ||||||||||| || Sbjct 143929 GTTCCCGGGGGCCCAGCAAGGATAGCACCTCGAGGAATCTTGGCTCC 143975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260027179440