Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq6 149 2e-30
seq3 125 2e-23
seq5 96.9 1e-14
seq7 95.1 4e-14
seq1 86.0 2e-11
>seq6
Length=3061052
Score = 149 bits (164), Expect = 2e-30
Identities = 515/801 (64%), Gaps = 2/801 (0%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||| ||||| || || ||||| | || ||| || | |||||| || || |
Sbjct 1842792 CCCGAGGAAATCTCCTCCATGGTCCTCACCAAGATGCGTGAGACTGCTGAGGCCTACCTC 1842851
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
||| || || | | ||||| |||| || || ||||| || || || |||||||
Sbjct 1842852 GGTACCACCGTCAACAACGCTGTCGTTACCGTTCCCGCCTACTTCAACGACAGCCAGCGT 1842911
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || || || || || || || | || || || | || || || |||
Sbjct 1842912 CAGGCTACCAAGGACGCCGGTTTGATCGCCGGCCTCAACGTCCTCCGTATCATCAACGAA 1842971
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
||||| || || || ||||| || || ||||| || | | || || || |
Sbjct 1842972 CCCACCGCCGCTGCCATTGCCTACGGTCTTGACAAGAAGGTCGAGGGCGAGCGCAACGTC 1843031
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
|| || || ||| | ||||||||||| || ||||| || || || || | || |||||
Sbjct 1843032 CTCATCTTCGATCTTGGTGGTGGTACCTTCGATGTTTCCCTCCTGACCATCGAGGAGGGT 1843091
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891
|| || || || || | || |||||||| || || | ||||| || || || || ||
Sbjct 1843092 ATCTTCGAGGTCAAGTCTACCGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAAC 1843151
Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGA 349950
||||||||| || ||||| || || || ||||| ||||| || | ||| | |
Sbjct 1843152 CGTCTCGTTAACCACTTTGTCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTCTCTGT 1843210
Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010
|| |||| ||||||| || | || || || || ||||| |||||| || | ||
Sbjct 1843211 CAACAGCCGAGCCCTGCGTCGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTC 1843270
Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070
||| || | || ||||| || || || || ||||| || || | || |||| |
Sbjct 1843271 TTCTTCTGCTCAGACCTCGATCGAGATCGACTCTCTCTTCGAGGGTATTGACTTCTACAC 1843330
Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130
|| || || |||||||| || || || | || |||||| || || | || || |
Sbjct 1843331 CTCCATCACCCGTGCTCGTTTCGAGGAGCTTTGCCAGGATCTCTTCCGATCCACCATCCA 1843390
Query 350131 TCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGT 350190
|| || || || | ||||| || || ||| | | | | || | ||
Sbjct 1843391 GCCCGTCGACCGCGTGCTGTCTGATGCTAAGATCGACAAGAGCCTTGTCCACGAGATCGT 1843450
Query 350191 TTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAA 350250
| || |||||||| || ||||| || | || || | | | || | || ||
Sbjct 1843451 CCTCGTCGGTGGTTCCACCCGTATCCCCCGTATCCAGAAGCTCATCACCGACTACTTCAA 1843510
Query 350251 TGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGT 350310
|| || || || | || || || || ||||| |||||||| || |||||||| ||
Sbjct 1843511 CGGAAAGGAGCCCAACAAGTCCATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGT 1843570
Query 350311 TCAGGCATCTATTTTATCTGG 350331
|||||| | ||| | |||||
Sbjct 1843571 TCAGGCTGCGATTCTCTCTGG 1843591
>seq3
Length=5051094
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | | || ||||| || || || ||||| || || || || || ||
Sbjct 3315862 CATGCCACCTCGGAGGCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3315803
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||||||||| || |||||||||||||| | ||| ||||| |||||
Sbjct 3315802 GGACAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGG 3315743
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || |||||||| || | || ||||| || || | |||||| ||
Sbjct 3315742 AGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAGCTCTC 3315683
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| || || || | ||||| |||||
Sbjct 3315682 GACCTCGAGAGTGATGGTCTTGCCGGT 3315656
Score = 122 bits (134), Expect = 3e-22
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || || | ||||| ||||| || || ||||| || || || || |
Sbjct 3316094 TTTGCATACCACCGCGCAAACGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGT 3316035
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || || ||||| ||||| ||||| || || || || ||||| |
Sbjct 3316034 AGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGT 3315975
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || || || || || || | || ||||| || |||| || ||
Sbjct 3315974 CAGGAGGGATACCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGAGC 3315915
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || || | ||||| || || | || || || |||||||||||
Sbjct 3315914 TCTCAACCTCGAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAAATCTGCAT 3315860
Score = 116 bits (128), Expect = 1e-20
Identities = 169/236 (72%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| ||||| || | ||||| | || || || || || ||||| || |
Sbjct 3316322 TTTGCATACCGCCACGCAAGCGGAGAACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGT 3316263
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || ||||| || || || ||||| || ||||||||||| ||||| || || |
Sbjct 3316262 AGTCGCTCAAGGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGT 3316203
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
||||||| || || || ||||| || || || ||| || || || ||||||| || |||
Sbjct 3316202 CAGGAGGGATGCCCTCCTTATCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCTGAT 3316144
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || ||||| | || | ||||| ||||| || || || || || || |||||
Sbjct 3316143 GACTCGACTTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088
>seq5
Length=3459663
Score = 96.9 bits (106), Expect = 1e-14
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | || || || ||||| || || || || || || ||
Sbjct 1049172 ACCACCACGCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1049113
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || || || || || || ||||| || ||||| || || ||||| || || ||
Sbjct 1049112 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 1049053
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || || ||||| || || | || ||||| || || | || || | || ||
Sbjct 1049052 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCAC 1048993
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || || |||||||||||
Sbjct 1048992 CTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 1048945
>seq7
Length=2782040
Score = 95.1 bits (104), Expect = 4e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| ||||| || || || || | ||||| ||||| || || || || |||||||||||
Sbjct 1279509 TTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 1279450
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
||||| ||||| |||||||| || || || || ||||| || || | || ||||| ||
Sbjct 1279449 AGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1279390
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| | || || | || || || || || | ||||| || || || || || || |||
Sbjct 1279389 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 1279330
>seq1
Length=6530789
Score = 86.0 bits (94), Expect = 2e-11
Identities = 99/133 (74%), Gaps = 3/133 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| |||||||| | || || ||| || || | |||||| || || |||||||| ||
Sbjct 5178223 CGAGGCACACCGAGGGTGACGTTC---TTGGAGGAAACACCGGCGAAATGGAAAGTGTTC 5178167
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
| || | ||||| | ||||||||||| ||||| || || | || |||||||||||
Sbjct 5178166 AACGTCATCTGAGTCGCAGGCTCACCAATGGACTGAGCGGCCAAGACACCAACCATTTCA 5178107
Query 377578 CCAGGATTGACAA 377590
||||| |||||||
Sbjct 5178106 CCAGGGTTGACAA 5178094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252342095118
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