Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6 423 2e-113 seq3 129 6e-25 >seq6 Length=3061052 Score = 423 bits (468), Expect = 2e-113 Identities = 956/1427 (67%), Gaps = 30/1427 (2%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCT- 78565 |||||| || |||| | || | | |||| ||||||| ||||| || || ||||| | Sbjct 2277126 GAACTCACCAGCCAAGACACGTCTCTGGTAAATGTTGGAAGTGTAAGGTTC-AAAGCATT 2277068 Query 78566 CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAAT 78625 | ||||| || | || || | ||| ||| || |||||||| || ||||| | | Sbjct 2277067 CATTGTTGCCGAGAATTTGCGAGGTACTGGCTGTGGGCATGGGAGCTACCAGCAAGCTGT 2277008 Query 78626 TCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCA-------AAATTCATTC 78678 | || | ||| ||| ||||| || | ||| | ||||| | || | | Sbjct 2277007 TGCGGATACCGTGCTCCTTGACCTGCTCACGAAGGTCCTCCCACTCCCACAGATCCGATG 2276948 Query 78679 GC--CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGA 78736 || | || ||| ||||||| || ||||| |||||||| || || || ||||||| Sbjct 2276947 GCTTCACGTTCC---ACATGTCAAACTGCAGGATGCCCTCGGAAGCAGGAGATCCCTTGA 2276891 Query 78737 ACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGT 78796 | | |||||||| |||| ||| |||||||| || || | || ||| ||||||| Sbjct 2276890 ATGACTCGTAAGGGCCCTGCTCTTTGGCGAGCTCAACCGAAGCCGTCAAGGCGGCGTGGT 2276831 Query 78797 ACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGC 78856 | | | || ||||| |||||| | ||| || |||| || ||||| | || | Sbjct 2276830 AAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCGAAGGGGAGTC 2276771 Query 78857 CGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCA 78916 || || ||| |||| || || || || || || | | || |||||||| |||| Sbjct 2276770 TCAGGGCCAAGAAAGCATCAGCGAGACCTTGAACACCCACGCCAATGGGTCGGTGACGCA 2276711 Query 78917 TGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGT 78976 ||||||| ||||||||| ||| | ||||| ||| || |||| ||| || | Sbjct 2276710 TGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACGTCAATGATTTTGTTGAGAT 2276651 Query 78977 TACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAAT-GATTTCCTTTG 79035 | || ||||||| |||| ||||| | || || |||||| | | || || Sbjct 2276650 TGCGGACGACGACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGCAGCCCTCGTTGT 2276591 Query 79036 A-TGAAAGTCGGTAGGCACAGC----GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGC 79090 | | || | || |||| ||| || ||||||||||| |||||| |||||| ||| Sbjct 2276590 AGTCAACGAAGGATGGCAGAGCCAGAGAAGCCAGGTTGCAAACGGCCACCTCGTCAGGGG 2276531 Query 79091 TAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT--GATGGTGCCGATGTTCTT 79148 | ||||||||| || ||||| | || || |||| ||| || |||| |||||| Sbjct 2276530 CGCAGTACTCGATGATCTCGGTGCAGAGGTTGGA--ACTTCGGATTGTTCCGAGGTTCTT 2276473 Query 79149 CTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAAC 79208 |||||||||||| ||| ||| ||||||||| |||| | || | ||||||||| Sbjct 2276472 CTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCAGT 2276413 Query 79209 CTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACC 79268 ||| || ||||| || ||| | | | ||||| || ||| | ||||| Sbjct 2276412 CTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGGCCTTGATGGTCTTGCGGCCGCGACC 2276353 Query 79269 CTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCC 79328 || ||||| || ||||| | | || |||| || ||| |||| ||| || Sbjct 2276352 CTCGCTCTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGACC 2276293 Query 79329 CGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAA 79388 |||||||| | |||||||||||| |||||| ||| |||||| || || |||||| Sbjct 2276292 TGGGCACTCATTGGGGCACATCAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAA 2276233 Query 79389 GAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTG 79448 || || |||||||| |||||| ||| || || || ||| | ||||| | ||| || Sbjct 2276232 CAGATCTGGGATCCAGAGGGCCAAGAAAAGATCACGAGCACGAACTTCCTCCTTGCCGTG 2276173 Query 79449 GTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGC 79508 |||| ||||| ||||| || || | | |||||| ||||| ||||| ||||||||||| Sbjct 2276172 GTTCTTACGCAAGTCGAGGAACTCGAATACGTCGGCATGCCATGGCTCAAGATAGATGGC 2276113 Query 79509 GAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAAC 79568 || | || |||||| ||| ||||||| || || | |||||||||||||| || Sbjct 2276112 AAAGGCGCCAGGACGCTTGTTGCCACCCTGGTCAACATATCTAGCCGTGTTGTTGAAGAC 2276053 Query 79569 TCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCT 79628 || |||||||| || | |||| || ||||| || ||| || | ||| | Sbjct 2276052 CCGAAGCATGGGGACCAGACCGTTGGATGTTCCGTTGGTACCGGCAATGTAGGAACCAGT 2275993 Query 79629 CGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCA 79688 || || ||| | || || ||||| || || | | |||||||| ||||| Sbjct 2275992 AGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCAGCCATTTTGGAGATCATGGCGCA 2275933 Query 79689 CTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748 |||||| || || ||||| || || || ||| |||||||| ||||||||||||| Sbjct 2275932 GGTCTTGAGGGTGTCATAGATACCATCAATGCTGTCATCCTTCATGTCGACCAGGAAGCA 2275873 Query 79749 GCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 |||| ||| | | |||||||| |||||||| || || | ||||| ||||| Sbjct 2275872 AGAGGACAGCTGGGACTGAGGAGTACCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAA 2275813 Query 79809 GAACTTTTGGCT---CATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTG 79865 |||||| ||| ||| || | |||||||| |||||||| | || ||| || Sbjct 2275812 GAACTT---GCTCGACATGAGGTTATACGTCTCAATGACGCGCTCAATGTTGTCTCCCCA 2275756 Query 79866 GATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCGCCGA 79912 ||||||||| || || ||||||| | || ||| || |||| ||| Sbjct 2275755 GATGCCGACAGCAACACGCATGATCATGTGCTGAGGACGCTCGACGA 2275709 Score = 401 bits (444), Expect = 7e-107 Identities = 944/1413 (67%), Gaps = 24/1413 (2%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | ||||||| || || ||||||||| || ||| || | ||| ||| Sbjct 2275720 CCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTC 2275779 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 ||||| || |||| ||| | || ||||||||||| ||||| | || || || || Sbjct 2275780 ATTGAGACGTATAACCTCATGT-CGAGCAAGTTCTTCACCCACGCTTCCCCCACACTCTT 2275838 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 ||| |||||||| | | ||| |||| || ||||| || | ||||||||||| Sbjct 2275839 CAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGATGA 2275898 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 ||||||||| || ||||| || || |||||| ||||| |||||||| | | || Sbjct 2275899 CAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAATGGCTGG 2275958 Query 19342 GGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 |||||||| || || | ||||| | | |||| | || || || || Sbjct 2275959 CGGTATCGGCCTCAACGTCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTACCAA 2276018 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 |||| | || ||||| | ||||| ||||| || ||||||||||||||||| || || || Sbjct 2276019 CGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGATATGT 2276078 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 ||||||| ||| ||| || ||| | || |||||||| || ||||||||||| || Sbjct 2276079 TGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTATCTTGAGCCATGGCATGC 2276138 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 ||||| | || |||||||| |||| |||||| || | ||||| | || ||| Sbjct 2276139 CGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCGTGCTCG 2276198 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || || ||| |||| | ||||| || || || |||||| || || |||||| ||| Sbjct 2276199 TGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAGAACGG 2276258 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || ||| |||||||||||| | || ||||| || || ||||| ||||||||||| Sbjct 2276259 CGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTGCTACGGCGAGGA 2276318 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 ||| | | ||||| || |||| | |||| || | ||| || ||| Sbjct 2276319 GTTTGAGGCCTTGTATGAGAAGTACGAGAGCGAGGGTCGCGGCCGCAAGACCATCAAGGC 2276378 Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821 || | | | ||| || | ||| | |||| |||||||| | || | |||| Sbjct 2276379 CCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCCTTCATGCT 2276438 Query 19822 CTACAAGGA-CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTC 19878 ||||||||| | | || ||| |||| || ||||||||| |||| | ||| |||| Sbjct 2276439 CTACAAGGATCACTGC-AACCGCAAGAGCAACCAGAAGAACCTCGGAACAATCCGAAGT- 2276496 Query 19879 GTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAA 19938 |||||||| || || || ||||| ||| | | || |||||| ||||| || || Sbjct 2276497 -TCCAACCTCTGCACCGAGATCATCGAGTACTGCGCCCCTGACGAGGTGGCCGTTTGCAA 2276555 Query 19939 TCTGGCGTCCCTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCGACTTTGC 19992 ||||| || ||| ||||| | ||||| ||| | || || ||| || Sbjct 2276556 CCTGGCTTCTCTGGCTCTGCCATCCTTCGTTGACTACAACGAGGGCTGCTACGATTTCCA 2276615 Query 19993 CAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAA 20052 || || | ||||| || | ||||||| || ||||| || |||| || || Sbjct 2276616 GAAGCTGCATGAGGTCACTCAGGTCGTCGTCCGCAATCTCAACAAAATCATTGACGTCAA 2276675 Query 20053 CTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGG 20112 | ||||| | ||| ||| || || || ||||| ||||| || || | | || Sbjct 2276676 CCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGTCACCGACCCATTGGCGTGGG 2276735 Query 20113 CGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGC 20172 || || || || || || | |||| || || | ||| | ||||| ||| |||| Sbjct 2276736 TGTTCAAGGTCTCGCTGATGCTTTCTTGGCCCTGAGACTCCCCTTCGAGTCACCCGAGGC 2276795 Query 20173 GCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTG 20232 || ||| | |||||| ||||| || || | |||||||| ||| | || ||| Sbjct 2276796 TCGTGAGTTGAACAAGCAGATCTTTGAAACCATTTACCACGCCGCCTTGACGGCTTCGGT 2276855 Query 20233 CGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGG 20292 || |||||||||||| | ||||| |||||| | |||||||| || || || |||||||| Sbjct 2276856 TGAGCTCGCCAAAGAGCAGGGCCCTTACGAGTCATTCAAGGGATCTCCTGCTTCCGAGGG 2276915 Query 20293 TATCCTCCAGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCC 20345 ||||| ||| ||||||||| ||| | | || || | | |||| | || Sbjct 2276916 CATCCTGCAGTTTGACATGTGGAACGTGAAGCCATCGGATCTGTGGGAGTGGGAG-GACC 2276974 Query 20346 TCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGA 20405 | | || ||||| ||||| | |||||| ||||| || || |||||||| | Sbjct 2276975 TTCGTGAGCAGGTCAAGGAGCACGGTATCCGCAACAGCTTGCTGGTAGCTCCCATGCCCA 2277034 Query 20406 CCGCCTCGACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAAC 20464 | ||| ||| | || || | || ||||| | | ||||| || || ||||| ||||| Sbjct 2277035 CAGCCAGTACCTCGCAAATTCTCGGCAACAATGAATGCTTT-GAACCTTACACTTCCAAC 2277093 Query 20465 ATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 || ||| | | ||| |||| ||||||||| Sbjct 2277094 ATTTACCAGAGACGTGTCTTGGCTGGTGAGTTC 2277126 >seq3 Length=5051094 Score = 129 bits (142), Expect = 6e-25 Identities = 290/426 (68%), Gaps = 20/426 (5%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || || || ||||| ||| ||| | ||| | || ||||||||||| ||||||||| Sbjct 937223 GTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAATCTTCTGGCTCAAGAAGCGTGGC 937282 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 || ||||| || |||| |||||||||||||| || || || |||||||||||||| Sbjct 937283 CTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCCTCCACACC 937342 Query 60123 GAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAAT-GCCCTTCCAAGGA---TA 60177 || || || || | ||||| || ||||| ||| || |||| |||| | | Sbjct 937343 GACTTCGC-CTGCCTGCTCTTCTCTCACCT----GAAGCATCGCCCCAGCAAGCAGCGCA 937397 Query 60178 TTCACAAGATTGTTCAGTGGGCTTGTGA-AGTGGAGAGCGAGTTCATCACAGAAGCGCTT 60236 |||| ||||| ||| | || | | | ||| || ||| | || || || | Sbjct 937398 TTCAGGAGATT-ATCACCGATGCCGTCACAATCGAGCAGGAATTCTTGACTGAGGCATTG 937456 Query 60237 CCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCG 60296 || ||| || | || ||| || || |||| |||||||||| |||| |||||| Sbjct 937457 CCCTGCGCTCTTCTCGGCATGAACTCTACCCTGATGAAGCAGTACATTGAGTTCGTCGCG 937516 Query 60297 GACCGC---CTCATGGCCCAGTTTGGAGAAGGACCA-ATTTACGGCGTGAATAACCCTTT 60352 || ||| ||| | || | ||| || || | || ||| || ||||| || Sbjct 937517 GATCGCTTGCTCGTTGC----TCTGGGCAATGAGAAGATCTACAAGGTCTCCAACCCCTT 937572 Query 60353 CGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGG 60412 ||||| ||||||| |||||| ||| || |||||||||||||| ||||||||||| | Sbjct 937573 CGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGGGTAGC 937632 Query 60413 GGATTA 60418 ||||| Sbjct 937633 TGATTA 937638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524073204640