Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6 226 3e-54 seq10 122 1e-22 >seq6 Length=3061052 Score = 226 bits (250), Expect = 3e-54 Identities = 520/772 (67%), Gaps = 16/772 (2%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || || | || ||| || ||| || ||| ||| Sbjct 2275720 CCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAGCGCGTC 2275779 Query 53240 CGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 ||||||||| || | ||| ||| |||| ||| || ||||| | || || || Sbjct 2275780 ATTGAGACGTATAACCTCATGTCGAGC---AAGTTCTTCACCCACGCTTCCCCCACACTC 2275836 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 ||||| || ||||| ||| | ||| |||| ||||||||||| | ||||||||| Sbjct 2275837 TTCAATGCCGGTACTCCTCAGTCCCAGCTGTCCTCTTGCTTCCTGGTCGACATGAAGGAT 2275896 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 ||| || || || ||||| || || |||||| || ||| |||||||| | | Sbjct 2275897 GACAGCATTGATGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAAATGGCT 2275956 Query 53417 GGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGA 53474 || |||||||| || || || | || ||||||| | || | || || | Sbjct 2275957 GGCGGTATCGGCCTCAACG--TCCACCGCATCCGTGCTACTGGTTCCTACATTGCCGGTA 2276014 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 | ||||| || | || | || || ||||| || ||||||||||||||||| | | Sbjct 2276015 CCAACGGAACATCCAACGGTCTGGTCCCCATGCTTCGGGTCTTCAACAACACGGCTAGAT 2276074 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 | || |||||||||| ||||| || | || |||||||| || ||||| |||| Sbjct 2276075 ATGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCCTTTGCCATCTATCTTGAGCCATGGC 2276134 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 | |||||| | | ||||| ||||| ||||| ||| || || | || || | || | Sbjct 2276135 ATGCCGACGTATTCGAGTTCCTCGACTTGCGTAAGAACCACGGCAAGGAGGAAGTTCG-T 2276193 Query 53655 GC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713 || ||||| || || || || ||||| || || || |||||| | || |||||| Sbjct 2276194 GCTCGTGATCTTTTCTTGGCCCTCTGGATCCCAGATCTGTTCATGAAGCGTGTCGAGAAG 2276253 Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGG 53772 ||| || ||| |||||||||||| || |||||||| || || | | || |||||| Sbjct 2276254 AACGGCGACTGGACCCTGATGTGCCCCAATGAGTGCCCAGGTCTGGCCGACTG-CTACGG 2276312 Query 53773 TGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGG 53831 ||||||||| | | ||||| || ||||| || | |||| ||| | |||| Sbjct 2276313 CGAGGAGTTTGAGGCCTTGTATGAGAAGTACG-AGAGCGAGGGTCGCGGCCGCAAGACCA 2276371 Query 53832 TCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGT 53891 ||||||| | || | ||| | | || ||| || |||| ||||| || | || | Sbjct 2276372 TCAAGGCCCAGAAGCTGTGGTACTCTATTCTCGAGGCCCAGACTGAGACCGGTAACCCCT 2276431 Query 53892 ACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||| |||||||||| |||| |||||||||||||||||| |||| Sbjct 2276432 TCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 2276483 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||||||||| | ||| ||||| || || || || ||||| |||| || |||| Sbjct 2277309 TGCTGATCGTGGTGCTTTCATTGACCAATCTCAATCCCTCAACATTCACATGAAGGATCC 2277368 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | | ||| ||| | | | |||||||| || |||||| || |||||||| || Sbjct 2277369 TACCATGGGTAAGATCACCAGCATGCACTTCACTGGCTGGAAGCTTGGTCTCAAGACCGG 2277428 Query 55906 TATGTACTATCTGCGGAC 55923 |||||||| ||||| || Sbjct 2277429 CATGTACTACCTGCGTAC 2277446 >seq10 Length=2523473 Score = 122 bits (134), Expect = 1e-22 Identities = 283/422 (67%), Gaps = 6/422 (1%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || || || || ||||||| |||||| ||||| || |||| | | Sbjct 20896 CCGGTACCGATACCGTCGGCTCCGTTGATCAGAACCATCGGAACGACTGGTGCGTACACC 20955 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACG-TACTTGAGCACCGCATTGTCACTCGG 117270 || ||||| | ||| || || || || | | ||| || | | | || ||| Sbjct 20956 TCGGGCTCGATCTGGCTGCCTTCCTC-GTATTGATGCTTAAGAATGGGCTCATCCAGCGG 21014 Query 117271 ATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330 ||| || || | | || | | ||| || || ||||||||| || ||||| Sbjct 21015 GCAGAAGATCTTTCGCGCAAAGGGAGACAAGCGGGTAAAGGTGTAACGAGGACTAGCAGC 21074 Query 117331 ATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 ||| ||||||||||| |||| |||||| | || || ||||| | | ||| | ||| Sbjct 21075 ATCAGAACCACCAGCAAGTCGCGAACCGAAGTTACCGCTTGGCTCAAGGCAGTTGACGTT 21134 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450 ||||| || |||||||| || ||||| | || || ||| || ||||||| Sbjct 21135 GTTGGAACCGACAAAGTTCTGCGCCAAACCAATGATGGTCTGTTGAAGCGAAACCTCACC 21194 Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTC--ATGTCT 117508 ||||| || || || || | | | ||| || | || | || |||||| || | Sbjct 21195 GTGGTGGTAGGCAGTGTGGCCACCAATGTATCCAGACAATTCGGCAACCTTCTGATCCTT 21254 Query 117509 GACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCA 117568 ||| || |||| |||||| |||| |||| || ||||| | |||| |||||||||||| Sbjct 21255 GAC--CAAGTTCCTCTTGAAGCAGCCATACATGACCTTTCTTTGACCAGGCTTCAGACCA 21312 Query 117569 TC 117570 || Sbjct 21313 TC 21314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215274938800