Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6 289 3e-73 seq3 158 1e-33 seq5 143 3e-29 seq7 132 5e-26 seq10 113 5e-20 >seq6 Length=3061052 Score = 289 bits (320), Expect = 3e-73 Identities = 911/1388 (66%), Gaps = 40/1388 (3%) Strand=Plus/Minus Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 ||| | ||||||||| ||||| || ||||| ||||| || || | || || || || Sbjct 2277093 GTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTGGCTGT 2277034 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAA 80507 ||||| || | |||| || || || | ||||||| ||||| | ||| || | Sbjct 2277033 GGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCTTGACCTGCTCACGAAG 2276974 Query 80508 ATCTGACCAAAAAT-CA-ACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGC 80563 || ||| || | || | ||| | || ||||||||| ||||| ||||| Sbjct 2276973 GTCCTCCCACTCCCACAGATCCGATGGCT-TCACGTTCCACATGTCAAACTGCAGGATGC 2276915 Query 80564 CCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCAC 80623 |||| || || ||||| ||| ||| | |||||| ||||||| | ||||| |||||| Sbjct 2276914 CCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAAGGGCCCTGCTCTTTGGCGAGCTCAA 2276855 Query 80624 ACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCG 80683 ||| || | | ||| ||||| |||||| ||||||| |||||||| | || | Sbjct 2276854 CCGAAGCCGTCAAGGCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAG 2276795 Query 80684 CCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGC 80743 ||| || ||||| | | | || || ||| | ||||| || || ||||| | Sbjct 2276794 CCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAAGAAAGCATCAGCGAGACCTTGAACAC 2276735 Query 80744 CGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGG-CCTCCGGAATTGGGTAAAAG 80802 | | | | || || ||||| ||| |||| | | |||| ||||| | | ||||| | Sbjct 2276734 CCACGCCAATGGGTCGGTGACGCATGTT-GCTGTTTCGGGCCTCCTGGACGGGGTAGTGG 2276676 Query 80803 TTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTC 80862 || || |||| ||| || ||||| || ||| | || || ||||| || ||| Sbjct 2276675 TTGACGTCAATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTC 2276616 Query 80863 TGAAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGAAGGCTCAGGGACGCCAGA 80916 || || ||| | | | | || || || | || || ||| || ||||| Sbjct 2276615 TGGAAATCGTAGCAGCCCTCGTTGTAGTCAACGAAGGATGGCAGAGCCAGAGAAGCCAGG 2276556 Query 80917 TTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAA 80976 ||||| ||||||||||| |||| | |||||| ||| || ||||| | || ||| Sbjct 2276555 TTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAA 2276496 Query 80977 GACTTA--ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGC 81034 ||| ||||| || ||||| |||||||| |||| |||||| ||||||||| Sbjct 2276495 --CTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 2276438 Query 81035 ACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCG 81094 |||| | ||| |||||||||| ||| | || ||| || | || ||| | || | | Sbjct 2276437 GCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGG 2276378 Query 81095 CCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACT 81154 |||||| ||||||| || ||| | | ||||| | || | || |||| Sbjct 2276377 CCTTGATGGTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACT 2276318 Query 81155 TGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCG 81213 | |||| | ||| | | || |||||||||| || |||||||||||| ||||||| Sbjct 2276317 CCTCGCCGTAGCAGT-CGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCG 2276259 Query 81214 GTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCG 81273 || ||||| ||| ||||||||| || |||||||||||||| ||| || || Sbjct 2276258 CCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCA 2276199 Query 81274 CG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTC 81332 || ||| || | ||||| | || ||||| ||||| ||||| || || | | ||| Sbjct 2276198 CGAGCA-CGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAATACGTC 2276140 Query 81333 CGCATGCCATGGCTCCAGATACACGGCGA--TCGAC----CCCTTGCGACGGCCACCCTG 81386 |||||||||||||| ||||| | ||| | || | | |||| ||||||||| Sbjct 2276139 GGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGCTTG---TTGCCACCCTG 2276083 Query 81387 GTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTG 81446 || || || | || || ||| || || || | ||| |||| | ||| | || Sbjct 2276082 GTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGT 2276023 Query 81447 ACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCG 81504 ||||| ||||| | || || || | || || | | || ||| || ||| Sbjct 2276022 TCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGACGTTG--AGGCCG 2275965 Query 81505 ATGCCACCTGACCACTTT-GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTC 81563 || || || | ||| ||| || ||| || || || | ||| ||||| || || || Sbjct 2275964 ATACCGCCAG-CCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATC 2275906 Query 81564 GATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG-- 81621 ||||| || | |||||||| | || ||| || |||| || ||| | ||| Sbjct 2275905 AATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCT--GGGACTGAGGAGTA 2275848 Query 81622 CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAG 81681 ||||||||||| ||||| |||| ||||| |||| | | | ||||| |||| ||| Sbjct 2275847 CCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATAC 2275788 Query 81682 GTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATG 81741 || || ||||||| ||| | ||| || || |||| ||| |||||||| | |||| Sbjct 2275787 GTCTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATG 2275728 Query 81742 TACTGGGG 81749 | ||| || Sbjct 2275727 TGCTGAGG 2275720 >seq3 Length=5051094 Score = 158 bits (174), Expect = 1e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || || |||||||| | ||||| || || | Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||| || ||||||||||||||||| || || || |||||| Sbjct 3316376 GATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 3316435 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||||||||| || ||||||| |||||| | ||| ||||| || Sbjct 3316436 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGC-GACTACAA 3316494 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| ||| || || || ||| | ||||| || || || || Sbjct 3316495 CATTCAGAAGGAGAGCACCCTCCACCTGGTCCTCCGTCTCCGTGGCGGCCA 3316545 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || ||||| ||||| ||| ||||| ||| | ||| | ||| | Sbjct 3315656 ACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGATACCATCGACAATGTCAAGTCG 3315715 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| |||||||| |||||||||||| | || |||||||| ||| Sbjct 3315716 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGATCTTTGCTGGAAAG 3315775 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || |||| || ||||| | ||||| || |||| ||||| ||||| || || Sbjct 3315776 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3315835 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 3315836 CTTGTGCTTCGCCTCCGAGGTGG 3315858 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || |||||||| || ||||| ||||||||| || | Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAG--AGCT 3315917 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | ||| | ||| | || || || ||||||||||| || ||||| |||| Sbjct 3315918 CCGACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACC 3315977 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||||| || ||||| ||||| || || || ||||| | || ||||| | ||||| | Sbjct 3315978 AGCAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACA 3316037 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| ||||| || ||||| || | ||| | |||||||| Sbjct 3316038 ACATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGG 3316086 Score = 140 bits (154), Expect = 4e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| |||||||||||||| || || | || || |||||| Sbjct 3316088 ATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGTCATCA 3316147 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||| || || || || |||||||| || ||||| ||||| Sbjct 3316148 GACACGATTGACAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTGACCAA 3316207 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || |||||||| |||||||||||||| | || ||| | ||| ||||| || Sbjct 3316208 CAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGC-GACTACAA 3316266 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 | || |||||| ||| || || Sbjct 3316267 CATTCAGAAGGAAAGCACACTGCA 3316290 Score = 116 bits (128), Expect = 4e-21 Identities = 143/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || ||||||||||| ||||| | || | || || || | |||||| Sbjct 937145 AAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCTTTCGCTCAGCGC 937204 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | || || ||| ||| || || || || || || ||||| || || ||| Sbjct 937205 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAATCTTC 937264 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| ||||||||||| |||||| | || || |||||||| |||||||| Sbjct 937265 TGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 937324 Query 64840 GACGAGGGGCTCCAC 64854 |||||||| |||||| Sbjct 937325 GACGAGGGCCTCCAC 937339 >seq5 Length=3459663 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| || || |||||||| ||||| Sbjct 1048945 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCG 1049004 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| || || || |||||| Sbjct 1049005 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 1049064 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 1049065 CAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 1049124 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || |||| || || ||||| Sbjct 1049125 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGG 1049171 >seq7 Length=2782040 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 1279331 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1279390 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || ||||| |||||||||||||| Sbjct 1279391 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTG 1279450 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || |||||||| ||||| |||||||||| || ||||| | ||||| || | || ||| Sbjct 1279451 ATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAG 1279510 Query 27595 G 27595 | Sbjct 1279511 G 1279511 >seq10 Length=2523473 Score = 113 bits (124), Expect = 5e-20 Identities = 284/423 (67%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTG-TC 32042 || || || |||||| || | ||||| || || | |||| |||||| |||| || || Sbjct 21314 GATGGTCTGAAGCCTGGTCAAAGAAAGGTCATGTATGGCTGCTTCAAGAGGAACTTGGTC 21255 Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 || || |||||| || | |||| || ||| | | | || || ||||| ||||| Sbjct 21254 AAGGATCA-GAAGGTTGCCGAATTGTCTGGATACATTGGTGGCCACACTGCCTACCACCA 21196 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 ||| |||| ||||| || ||||| | | || ||||||||||||||| | || Sbjct 21195 CGGTGAGGTTTCGCTTCAACAGACCATCATTGGTTTGGCGCAGAACTTTGTCGGTTCCAA 21136 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | |||| || |||||| || | || || | || || || ||||| || Sbjct 21135 CAACGTCAACTGCCTTGAGCCAAGCGGTAACTTCGGTTCGCGACTTGCTGGTGGTTCTGA 21076 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCG--TCTCGCACCTTCGACGCGCAAGATTTTC 32280 |||||| || | ||||||| ||| ||||| | || | |||| | |||| ||||| ||| Sbjct 21075 TGCTGCTAGTCCTCGTTACACCTTTACCCGCTTGTCTC-CCTTTG-CGCGAAAGATCTTC 21018 Query 32281 GACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAG-CGGGTCGAGCC 32339 |||| ||| || | | || ||| | | | || || || ||| | | ||||||| Sbjct 21017 TGCCCGCTGGATGAGCCCATTCTTAAGCATCAATACGAGGAAGG-CAGCCAGATCGAGCC 20959 Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399 | | | ||| || || |||||||| | || | ||||| || || || ||||| || Sbjct 20958 CGAGGTGTACGCACCAGTCGTTCCGATGGTTCTGATCAACGGAGCCGACGGTATCGGTAC 20899 Query 32400 GGG 32402 || Sbjct 20898 CGG 20896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309644338720