Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq6 289 3e-73
seq3 158 1e-33
seq5 143 3e-29
seq7 132 5e-26
seq10 113 5e-20
>seq6
Length=3061052
Score = 289 bits (320), Expect = 3e-73
Identities = 911/1388 (66%), Gaps = 40/1388 (3%)
Strand=Plus/Minus
Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447
||| | ||||||||| ||||| || ||||| ||||| || || | || || || ||
Sbjct 2277093 GTTGGAAGTGTAAGGTTCAAAGCATTCATTGTTGCCGAGAATTTGCGAGGTACTGGCTGT 2277034
Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAA 80507
||||| || | |||| || || || | ||||||| ||||| | ||| || |
Sbjct 2277033 GGGCATGGGAGCTACCAGCAAGCTGTTGCGGATACCGTGCTCCTTGACCTGCTCACGAAG 2276974
Query 80508 ATCTGACCAAAAAT-CA-ACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGC 80563
|| ||| || | || | ||| | || ||||||||| ||||| |||||
Sbjct 2276973 GTCCTCCCACTCCCACAGATCCGATGGCT-TCACGTTCCACATGTCAAACTGCAGGATGC 2276915
Query 80564 CCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCAC 80623
|||| || || ||||| ||| ||| | |||||| ||||||| | ||||| ||||||
Sbjct 2276914 CCTCGGAAGCAGGAGATCCCTTGAATGACTCGTAAGGGCCCTGCTCTTTGGCGAGCTCAA 2276855
Query 80624 ACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCG 80683
||| || | | ||| ||||| |||||| ||||||| |||||||| | || |
Sbjct 2276854 CCGAAGCCGTCAAGGCGGCGTGGTAAATGGTTTCAAAGATCTGCTTGTTCAACTCACGAG 2276795
Query 80684 CCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGC 80743
||| || ||||| | | | || || ||| | ||||| || || ||||| |
Sbjct 2276794 CCTCGGGTGACTCGAAGGGGAGTCTCAGGGCCAAGAAAGCATCAGCGAGACCTTGAACAC 2276735
Query 80744 CGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGG-CCTCCGGAATTGGGTAAAAG 80802
| | | | || || ||||| ||| |||| | | |||| ||||| | | ||||| |
Sbjct 2276734 CCACGCCAATGGGTCGGTGACGCATGTT-GCTGTTTCGGGCCTCCTGGACGGGGTAGTGG 2276676
Query 80803 TTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTC 80862
|| || |||| ||| || ||||| || ||| | || || ||||| || |||
Sbjct 2276675 TTGACGTCAATGATTTTGTTGAGATTGCGGACGACGACCTGAGTGACCTCATGCAGCTTC 2276616
Query 80863 TGAAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGAAGGCTCAGGGACGCCAGA 80916
|| || ||| | | | | || || || | || || ||| || |||||
Sbjct 2276615 TGGAAATCGTAGCAGCCCTCGTTGTAGTCAACGAAGGATGGCAGAGCCAGAGAAGCCAGG 2276556
Query 80917 TTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAA 80976
||||| ||||||||||| |||| | |||||| ||| || ||||| | || |||
Sbjct 2276555 TTGCAAACGGCCACCTCGTCAGGGGCGCAGTACTCGATGATCTCGGTGCAGAGGTTGGAA 2276496
Query 80977 GACTTA--ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGC 81034
||| ||||| || ||||| |||||||| |||| |||||| |||||||||
Sbjct 2276495 --CTTCGGATTGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 2276438
Query 81035 ACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCG 81094
|||| | ||| |||||||||| ||| | || ||| || | || ||| | || | |
Sbjct 2276437 GCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCGAGAATAGAGTACCACAGCTTCTGGG 2276378
Query 81095 CCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACT 81154
|||||| ||||||| || ||| | | ||||| | || | || ||||
Sbjct 2276377 CCTTGATGGTCTTGCGGCCGCGACCCTCGCTCTCGTACTTCTCATACAAGGCCTCAAACT 2276318
Query 81155 TGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCG 81213
| |||| | ||| | | || |||||||||| || |||||||||||| |||||||
Sbjct 2276317 CCTCGCCGTAGCAGT-CGGCCAGACCTGGGCACTCATTGGGGCACATCAGGGTCCAGTCG 2276259
Query 81214 GTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCG 81273
|| ||||| ||| ||||||||| || |||||||||||||| ||| || ||
Sbjct 2276258 CCGTTCTTCTCGACACGCTTCATGAACAGATCTGGGATCCAGAGGGCCAAGAAAAGATCA 2276199
Query 81274 CG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTC 81332
|| ||| || | ||||| | || ||||| ||||| ||||| || || | | |||
Sbjct 2276198 CGAGCA-CGAACTTCCTCCTTGCCGTGGTTCTTACGCAAGTCGAGGAACTCGAATACGTC 2276140
Query 81333 CGCATGCCATGGCTCCAGATACACGGCGA--TCGAC----CCCTTGCGACGGCCACCCTG 81386
|||||||||||||| ||||| | ||| | || | | |||| |||||||||
Sbjct 2276139 GGCATGCCATGGCTCAAGATAGATGGCAAAGGCGCCAGGACGCTTG---TTGCCACCCTG 2276083
Query 81387 GTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTG 81446
|| || || | || || ||| || || || | ||| |||| | ||| | ||
Sbjct 2276082 GTCAACATATCTAGCCGTGTTGTTGAAGACCCGAAGCATGGGGACCAGACCGTTGGATGT 2276023
Query 81447 ACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCG 81504
||||| ||||| | || || || | || || | | || ||| || |||
Sbjct 2276022 TCCGTTGGTACCGGCAATGTAGGAACCAGTAGCACGGATGCGGTGGACGTTG--AGGCCG 2275965
Query 81505 ATGCCACCTGACCACTTT-GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTC 81563
|| || || | ||| ||| || ||| || || || | ||| ||||| || || ||
Sbjct 2275964 ATACCGCCAG-CCATTTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCATC 2275906
Query 81564 GATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG-- 81621
||||| || | |||||||| | || ||| || |||| || ||| | |||
Sbjct 2275905 AATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGACAGCT--GGGACTGAGGAGTA 2275848
Query 81622 CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAG 81681
||||||||||| ||||| |||| ||||| |||| | | | ||||| |||| |||
Sbjct 2275847 CCGGCATTGAAGAGTGTGGGGGAAGCGTGGGTGAAGAACTTGCTCGACATGAGGTTATAC 2275788
Query 81682 GTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATG 81741
|| || ||||||| ||| | ||| || || |||| ||| |||||||| | ||||
Sbjct 2275787 GTCTCAATGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATG 2275728
Query 81742 TACTGGGG 81749
| ||| ||
Sbjct 2275727 TGCTGAGG 2275720
>seq3
Length=5051094
Score = 158 bits (174), Expect = 1e-33
Identities = 175/231 (76%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || || || |||||||| | ||||| || || |
Sbjct 3316316 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGC 3316375
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||| || ||||||||||||||||| || || || ||||||
Sbjct 3316376 GATACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 3316435
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || || ||||||||||| || ||||||| |||||| | ||| ||||| ||
Sbjct 3316436 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGC-GACTACAA 3316494
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||| ||| || || || ||| | ||||| || || || ||
Sbjct 3316495 CATTCAGAAGGAGAGCACCCTCCACCTGGTCCTCCGTCTCCGTGGCGGCCA 3316545
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || ||||| ||||| ||| ||||| ||| | ||| | ||| |
Sbjct 3315656 ACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGATACCATCGACAATGTCAAGTCG 3315715
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| |||||||| |||||||||||| | || |||||||| |||
Sbjct 3315716 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGATCTTTGCTGGAAAG 3315775
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || || |||| || ||||| | ||||| || |||| ||||| ||||| || ||
Sbjct 3315776 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3315835
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| || | || || || |||||
Sbjct 3315836 CTTGTGCTTCGCCTCCGAGGTGG 3315858
Score = 147 bits (162), Expect = 2e-30
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || |||||||| || ||||| ||||||||| || |
Sbjct 3315860 ATGCAGATTTTCGTCAAGACCTTGACAGGCAAGACGATCACTCTCGAGGTTGAG--AGCT 3315917
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | || | ||| | ||| | || || || ||||||||||| || ||||| ||||
Sbjct 3315918 CCGACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCTCCTGACC 3315977
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||||| || ||||| ||||| || || || ||||| | || ||||| | ||||| |
Sbjct 3315978 AGCAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTCTCCGACTACA 3316037
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||| ||||| || ||||| || | ||| | ||||||||
Sbjct 3316038 ACATCCAGAAGGAGTCCACCCTCCATCTCGTTCTTCGTTTGCGCGGTGG 3316086
Score = 140 bits (154), Expect = 4e-28
Identities = 155/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| |||||||||||||| || || | || || ||||||
Sbjct 3316088 ATGCAAATCTTCGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAAGTCGAGTCATCA 3316147
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||| || || || || |||||||| || ||||| |||||
Sbjct 3316148 GACACGATTGACAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCTGACCAA 3316207
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || |||||||| |||||||||||||| | || ||| | ||| ||||| ||
Sbjct 3316208 CAGCGTCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGAACCTTGAGC-GACTACAA 3316266
Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608
| || |||||| ||| || ||
Sbjct 3316267 CATTCAGAAGGAAAGCACACTGCA 3316290
Score = 116 bits (128), Expect = 4e-21
Identities = 143/195 (73%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719
|| ||||| || ||||||||||| ||||| | || | || || || | ||||||
Sbjct 937145 AAGAAGGCCGATTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCTTTCGCTCAGCGC 937204
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | || || ||| ||| || || || || || || ||||| || || |||
Sbjct 937205 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTTTTCAGCGGCGCATTCGCCTCAATCTTC 937264
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| ||||||||||| |||||| | || || |||||||| ||||||||
Sbjct 937265 TGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 937324
Query 64840 GACGAGGGGCTCCAC 64854
|||||||| ||||||
Sbjct 937325 GACGAGGGCCTCCAC 937339
>seq5
Length=3459663
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| || || |||||||| |||||
Sbjct 1048945 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCG 1049004
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| || || || ||||||
Sbjct 1049005 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 1049064
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 1049065 CAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 1049124
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || | || |||| || || |||||
Sbjct 1049125 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGG 1049171
>seq7
Length=2782040
Score = 132 bits (146), Expect = 5e-26
Identities = 138/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 1279331 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1279390
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || ||||| ||||||||||||||
Sbjct 1279391 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTG 1279450
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| |||||||| ||||| |||||||||| || ||||| | ||||| || | || |||
Sbjct 1279451 ATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAG 1279510
Query 27595 G 27595
|
Sbjct 1279511 G 1279511
>seq10
Length=2523473
Score = 113 bits (124), Expect = 5e-20
Identities = 284/423 (67%), Gaps = 8/423 (2%)
Strand=Plus/Minus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTG-TC 32042
|| || || |||||| || | ||||| || || | |||| |||||| |||| || ||
Sbjct 21314 GATGGTCTGAAGCCTGGTCAAAGAAAGGTCATGTATGGCTGCTTCAAGAGGAACTTGGTC 21255
Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102
|| || |||||| || | |||| || ||| | | | || || ||||| |||||
Sbjct 21254 AAGGATCA-GAAGGTTGCCGAATTGTCTGGATACATTGGTGGCCACACTGCCTACCACCA 21196
Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162
||| |||| ||||| || ||||| | | || ||||||||||||||| | ||
Sbjct 21195 CGGTGAGGTTTCGCTTCAACAGACCATCATTGGTTTGGCGCAGAACTTTGTCGGTTCCAA 21136
Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222
||| | |||| || |||||| || | || || | || || || ||||| ||
Sbjct 21135 CAACGTCAACTGCCTTGAGCCAAGCGGTAACTTCGGTTCGCGACTTGCTGGTGGTTCTGA 21076
Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCG--TCTCGCACCTTCGACGCGCAAGATTTTC 32280
|||||| || | ||||||| ||| ||||| | || | |||| | |||| ||||| |||
Sbjct 21075 TGCTGCTAGTCCTCGTTACACCTTTACCCGCTTGTCTC-CCTTTG-CGCGAAAGATCTTC 21018
Query 32281 GACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAG-CGGGTCGAGCC 32339
|||| ||| || | | || ||| | | | || || || ||| | | |||||||
Sbjct 21017 TGCCCGCTGGATGAGCCCATTCTTAAGCATCAATACGAGGAAGG-CAGCCAGATCGAGCC 20959
Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399
| | | ||| || || |||||||| | || | ||||| || || || ||||| ||
Sbjct 20958 CGAGGTGTACGCACCAGTCGTTCCGATGGTTCTGATCAACGGAGCCGACGGTATCGGTAC 20899
Query 32400 GGG 32402
||
Sbjct 20898 CGG 20896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309644338720
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