Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 1e-13
>seq2
Length=5234762
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 29852 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCT 29911
||||| | || |||||| |||| || | || |||| | ||||||||||| |||||
Sbjct 1830087 GGCTCTCGCTGGAGCTGTGTCTCGAGTGCCTCGACGTGGTTGAGGTAGACGTGCGCGTCG 1830146
Query 29912 CCCAGGTTGTGGA-CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29970
|||| | |||| || || || || | | || || ||||||| ||| | |||
Sbjct 1830147 CCCATGACGTGGGTCAGGCTG-CCGGGCACCAAGTCGCACACATGAGCCAGCATATGCGT 1830205
Query 29971 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 30030
||| || | |||||| |||||||| ||||| || || ||||||||||| | || | ||
Sbjct 1830206 GAGCAGCGCGTAGCTTGCGATGTTGAAGGGCACGCCAAGCCCCATGTCGCAGGAGCGTTG 1830265
Query 30031 GTAGAGCTGACA 30042
|||||| || ||
Sbjct 1830266 GTAGAGTTGGCA 1830277
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291
||| || || |||||||| | ||| ||||| ||||| || || || ||||||||| | ||
Sbjct 1830512 GTATTCCGCGCCGAAATGGCGCCATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTC 1830571
Query 30292 CCTGTGC-TCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349
| || || ||||| || |||| ||| || | ||| |||||| |||||||||||
Sbjct 1830572 TCGATGGGTC--AGCCCGAGATTATCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATC 1830629
Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAG 30408
|| | || ||| |||| | ||||| ||| ||||| || |||||||| |||
Sbjct 1830630 TTGATGCCTGCCTCGTTGAGCGGTATGGAGGAAGTGTTGCCCTC-GATGAACCACAACAG 1830688
Query 30409 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458
||| | | ||| ||| |||||| | ||| ||||| || || ||||
Sbjct 1830689 CTCGGCAATGACAGCCCGTGTAAAGACGCGCTTTGTCGTAAGTAGAGGAA 1830738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406309875097752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |