Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=5234762 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||| | || |||||| || || | || ||||||| ||||||||||| || || Sbjct 1830087 GGCTCTCGCTGGAGCTGTGTCTCGAGTGCCTCGACGTGGTTGAGGTAGACGTGCGCGTCG 1830146 Query 29684 CCCAGGGTGTGGA-CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742 |||| | |||| || || || || | | || || ||||||| ||| | ||| Sbjct 1830147 CCCATGACGTGGGTCAGGCTG-CCGGGCACCAAGTCGCACACATGAGCCAGCATATGCGT 1830205 Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802 ||| || | |||||| |||||||| |||||||| || ||||||||||| | || | || Sbjct 1830206 GAGCAGCGCGTAGCTTGCGATGTTGAAGGGCACGCCAAGCCCCATGTCGCAGGAGCGTTG 1830265 Query 29803 GTAGAGCTGGCA 29814 |||||| ||||| Sbjct 1830266 GTAGAGTTGGCA 1830277 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC-TCG 30073 ||||||| | ||| ||||| ||||| || || || ||||||||| | || | || || Sbjct 1830523 CGAAATGGCGCCATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTCTCGATGGGTC- 1830581 Query 30074 AAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30132 ||||| || |||| ||| || | ||| |||||| ||||||||||||| | || Sbjct 1830582 -AGCCCGAGATTATCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATCTTGATGCCTGC 1830640 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30191 |||| |||| | ||||| ||| ||||| || |||||||| |||||| | | || Sbjct 1830641 CTCGTTGAGCGGTATGGAGGAAGTGTTGCCCTC-GATGAACCACAACAGCTCGGCAATGA 1830699 Query 30192 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 | ||| |||||| | ||| ||||| || || |||| Sbjct 1830700 CAGCCCGTGTAAAGACGCGCTTTGTCGTAAGTAGAGGAA 1830738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162675287916