Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
>seq2
Length=5234762
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683
||||| | || |||||| || || | || ||||||| ||||||||||| || ||
Sbjct 1830087 GGCTCTCGCTGGAGCTGTGTCTCGAGTGCCTCGACGTGGTTGAGGTAGACGTGCGCGTCG 1830146
Query 29684 CCCAGGGTGTGGA-CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| | |||| || || || || | | || || ||||||| ||| | |||
Sbjct 1830147 CCCATGACGTGGGTCAGGCTG-CCGGGCACCAAGTCGCACACATGAGCCAGCATATGCGT 1830205
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
||| || | |||||| |||||||| |||||||| || ||||||||||| | || | ||
Sbjct 1830206 GAGCAGCGCGTAGCTTGCGATGTTGAAGGGCACGCCAAGCCCCATGTCGCAGGAGCGTTG 1830265
Query 29803 GTAGAGCTGGCA 29814
|||||| |||||
Sbjct 1830266 GTAGAGTTGGCA 1830277
Score = 89.7 bits (98), Expect = 4e-13
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC-TCG 30073
||||||| | ||| ||||| ||||| || || || ||||||||| | || | || ||
Sbjct 1830523 CGAAATGGCGCCATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTCTCGATGGGTC- 1830581
Query 30074 AAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30132
||||| || |||| ||| || | ||| |||||| ||||||||||||| | ||
Sbjct 1830582 -AGCCCGAGATTATCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATCTTGATGCCTGC 1830640
Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30191
|||| |||| | ||||| ||| ||||| || |||||||| |||||| | | ||
Sbjct 1830641 CTCGTTGAGCGGTATGGAGGAAGTGTTGCCCTC-GATGAACCACAACAGCTCGGCAATGA 1830699
Query 30192 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230
| ||| |||||| | ||| ||||| || || ||||
Sbjct 1830700 CAGCCCGTGTAAAGACGCGCTTTGTCGTAAGTAGAGGAA 1830738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406162675287916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |